RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 MYSM1Q5VVJ2 828 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 TRIM67Q6ZTA4 783 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 DGKHQ86XP1 1220 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 TBC1D5Q92609 795 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 ESR2Q92731 530 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 PHOX2BQ99453 314 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 IRF2BPLQ9H1B7 796 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 MLXIPQ9HAP2 919 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 MYO7AQ13402 2215 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 ADGRA3Q8IWK6 1321 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 SALL3Q9BXA9 1300 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 TECTAO75443 2155 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 H3BRB1 525 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 NOP56O00567 594 aaKnown RBP12.14□□□□□ -0.47
COPB1-207ENST00000529866 SORBS3O60504 671 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 MMP1P03956 469 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 SMIM10L2AP0DMW4 78 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 SMIM10L2BP0DMW5 78 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 TGFB3P10600 412 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 UBA1P22314 1058 aaKnown RBP12.14□□□□□ -0.47
COPB1-207ENST00000529866 HOXC8P31273 242 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 HAND2P61296 217 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 FOXK2Q01167 660 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 HIC1Q14526 733 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 QRICH1Q2TAL8 776 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 ASPRV1Q53RT3 343 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 IQCA1Q86XH1 822 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 ADGRF4Q8IZF3 695 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 PNMA1Q8ND90 353 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 ANKS1AQ92625 1134 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 EVI5LQ96CN4 794 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 PDCD2LQ9BRP1 358 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 C16orf70Q9BSU1 422 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 PLVAPQ9BX97 442 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 CPVLQ9H3G5 476 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 TUT1Q9H6E5 874 aaKnown RBP12.14□□□□□ -0.47
COPB1-207ENST00000529866 KAT14Q9H8E8 782 aa12.14□□□□□ -0.47
COPB1-207ENST00000529866 ZBTB47Q9UFB7 747 aaPredicted RBP12.14□□□□□ -0.47
COPB1-207ENST00000529866 TRIOO75962 3097 aa12.13□□□□□ -0.47
COPB1-207ENST00000529866 GRM6O15303 877 aa12.13□□□□□ -0.47
COPB1-207ENST00000529866 TREHO43280 583 aa12.13□□□□□ -0.47
COPB1-207ENST00000529866 TBX10O75333 385 aa12.13□□□□□ -0.47
COPB1-207ENST00000529866 LGALS2P05162 132 aa12.13□□□□□ -0.47
COPB1-207ENST00000529866 MYCLP12524 364 aaPredicted RBP12.13□□□□□ -0.47
COPB1-207ENST00000529866 HSD17B4P51659 736 aa12.13□□□□□ -0.47
COPB1-207ENST00000529866 DLX2Q07687 328 aaPredicted RBP12.13□□□□□ -0.47
COPB1-207ENST00000529866 MCMDC2Q4G0Z9 681 aa12.13□□□□□ -0.47
COPB1-207ENST00000529866 CLP1Q92989 425 aaKnown RBP12.13□□□□□ -0.47
COPB1-207ENST00000529866 IGFLR1Q9H665 355 aa12.13□□□□□ -0.47
COPB1-207ENST00000529866 MAP3K20Q9NYL2 800 aaKnown RBP12.13□□□□□ -0.47
COPB1-207ENST00000529866 ZNF215Q9UL58 517 aaPredicted RBP12.13□□□□□ -0.47
COPB1-207ENST00000529866 USP34Q70CQ2 3546 aa12.13□□□□□ -0.47
COPB1-207ENST00000529866 MICAL3Q7RTP6 2002 aa12.13□□□□□ -0.47
COPB1-207ENST00000529866 GFRA3O60609 400 aa12.12□□□□□ -0.47
COPB1-207ENST00000529866 CSPG5O95196 566 aa12.12□□□□□ -0.47
COPB1-207ENST00000529866 EYA4O95677 639 aa12.12□□□□□ -0.47
COPB1-207ENST00000529866 PARP1P09874 1014 aaKnown RBP12.12□□□□□ -0.47
COPB1-207ENST00000529866 CCND2P30279 289 aa12.12□□□□□ -0.47
COPB1-207ENST00000529866 BTG3Q14201 252 aaPredicted RBP12.12□□□□□ -0.47
COPB1-207ENST00000529866 IER5LQ5T953 404 aa12.12□□□□□ -0.47
COPB1-207ENST00000529866 FBXL6Q8N531 539 aa12.12□□□□□ -0.47
COPB1-207ENST00000529866 SAMD3Q8N6K7 520 aa12.12□□□□□ -0.47
COPB1-207ENST00000529866 AMNQ9BXJ7 453 aa12.12□□□□□ -0.47
COPB1-207ENST00000529866 USP26Q9BXU7 913 aa12.12□□□□□ -0.47
COPB1-207ENST00000529866 RNPEPQ9H4A4 650 aa12.12□□□□□ -0.47
COPB1-207ENST00000529866 CACNA1AO00555 2505 aa12.12□□□□□ -0.47
COPB1-207ENST00000529866 CFAP54Q96N23 3096 aa12.12□□□□□ -0.47
COPB1-207ENST00000529866 RIF1Q5UIP0 2472 aaKnown RBP12.11□□□□□ -0.47
COPB1-207ENST00000529866 RGS20O76081 388 aa12.11□□□□□ -0.47
COPB1-207ENST00000529866 ZXDAP98168 799 aa12.11□□□□□ -0.47
COPB1-207ENST00000529866 GHRHRQ02643 423 aa12.11□□□□□ -0.47
COPB1-207ENST00000529866 TCF15Q12870 199 aa12.11□□□□□ -0.47
COPB1-207ENST00000529866 GNPTABQ3T906 1256 aa12.11□□□□□ -0.47
COPB1-207ENST00000529866 STOX1Q6ZVD7 989 aa12.11□□□□□ -0.47
COPB1-207ENST00000529866 VSIG10LQ86VR7 867 aa12.11□□□□□ -0.47
COPB1-207ENST00000529866 TICAM2Q86XR7 235 aa12.11□□□□□ -0.47
COPB1-207ENST00000529866 TBC1D10CQ8IV04 446 aa12.11□□□□□ -0.47
COPB1-207ENST00000529866 SMRP1Q8NCR6 262 aa12.11□□□□□ -0.47
COPB1-207ENST00000529866 ZKSCAN3Q9BRR0 538 aa12.11□□□□□ -0.47
COPB1-207ENST00000529866 NEDD4P46934 1319 aa12.11□□□□□ -0.47
COPB1-207ENST00000529866 A0A0D9SFI3 127 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 TRIM6-TRIM34B2RNG4 842 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 RBAK-RBAKDNI3L0D1 243 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 LINC01565O15544 149 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 LINC00271P0C7V0 271 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 GHRP10912 638 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 GTF2F1P35269 517 aaKnown RBP eCLIP12.1□□□□□ -0.473e-9■■■■■ 105.7
COPB1-207ENST00000529866 MFAP1P55081 439 aaKnown RBP12.1□□□□□ -0.47
COPB1-207ENST00000529866 ARHGAP4P98171 946 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 SIGLEC14Q08ET2 396 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 TRAF1Q13077 416 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 ADAM15Q13444 863 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 NEDD9Q14511 834 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 PGM5Q15124 567 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 NAALADL2Q58DX5 795 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 FAM26DQ5JW98 314 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 TAF2Q6P1X5 1199 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 METTL7BQ6UX53 244 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 RSPH3Q86UC2 560 aa12.1□□□□□ -0.47
COPB1-207ENST00000529866 EFHBQ8N7U6 833 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms