RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 GPR20Q99678 358 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 C22orf23Q9BZE7 217 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 ZNF576Q9H609 170 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 MLXIPQ9HAP2 919 aa14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 V9GY48 417 aaPredicted RBP14.58□□□□□ -0.08
SEC61A1-206ENST00000491668 ADAMTS3O15072 1205 aa14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 PFKMP08237 780 aa14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 MYOGP15173 224 aa14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 HOXC8P31273 242 aa14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 RFC2P35250 354 aa14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 ADD1P35611 737 aaKnown RBP14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 RABGGTBP53611 331 aa14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 APOBRQ0VD83 1088 aa14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 MAPK8IP2Q13387 824 aaPredicted RBP14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 BFSP2Q13515 415 aa14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 MBTPS1Q14703 1052 aa14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 SYNE3Q6ZMZ3 975 aa14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 TRIM50Q86XT4 487 aa14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 SENP7Q9BQF6 1050 aa14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 KATNAL1Q9BW62 490 aa14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 RBM28Q9NW13 759 aaKnown RBP14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 NOD1Q9Y239 953 aa14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 UBIAD1Q9Y5Z9 338 aa14.57□□□□□ -0.08
SEC61A1-206ENST00000491668 SPTBN5Q9NRC6 3674 aaKnown RBP14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 GOLGA8AA7E2F4 631 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 GOLGA8BA8MQT2 603 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 H3BRB1 525 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 STXBP3O00186 592 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 NBNO60934 754 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 HMGB1P09429 215 aaKnown RBP14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 CKBP12277 381 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 SELPP16109 830 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 KCNA2P16389 499 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 RCAN1P53805 252 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 NEDD9Q14511 834 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 Q6ZUG5 572 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 FBXL16Q8N461 479 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 RETREG2Q8NC44 543 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 CYP2W1Q8TAV3 490 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 CAGE1Q8TC20 777 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 AFAP1L1Q8TED9 768 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 AGXT2Q9BYV1 514 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 TUT1Q9H6E5 874 aaKnown RBP14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 PCDHA6Q9UN73 950 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 PCDHA8Q9Y5H6 950 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 SLC4A7Q9Y6M7 1214 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 MYO9BQ13459 2157 aa14.56□□□□□ -0.08
SEC61A1-206ENST00000491668 PTPRSQ13332 1948 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 SMIM10L2AP0DMW4 78 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 SMIM10L2BP0DMW5 78 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 RPS6KB1P23443 525 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 ANAPC15P60006 121 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 FGD1P98174 961 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 PTK7Q13308 1070 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 BLOC1S2Q6QNY1 142 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 LRRC8DQ7L1W4 858 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 SERINC5Q86VE9 423 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 BRF1Q92994 677 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 GPRASP2Q96D09 838 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 PGBD1Q96JS3 809 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 MTIF3Q9H2K0 278 aaKnown RBP14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 NKX2-4Q9H2Z4 354 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 RIC8AQ9NPQ8 531 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 BARHL2Q9NY43 387 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 NID2Q14112 1375 aa14.55□□□□□ -0.08
SEC61A1-206ENST00000491668 ZBBXA8MT70 800 aa14.54□□□□□ -0.08
SEC61A1-206ENST00000491668 CXCL10P02778 98 aa14.54□□□□□ -0.08
SEC61A1-206ENST00000491668 ATP2A2P16615 1042 aaKnown RBP14.54□□□□□ -0.08
SEC61A1-206ENST00000491668 NAPAP54920 295 aa14.54□□□□□ -0.08
SEC61A1-206ENST00000491668 SP4Q02446 784 aa14.54□□□□□ -0.08
SEC61A1-206ENST00000491668 RAB30Q15771 203 aa14.54□□□□□ -0.08
SEC61A1-206ENST00000491668 ZNF618Q5T7W0 954 aa14.54□□□□□ -0.08
SEC61A1-206ENST00000491668 NLRX1Q86UT6 975 aa14.54□□□□□ -0.08
SEC61A1-206ENST00000491668 MAFAQ8NHW3 353 aaPredicted RBP14.54□□□□□ -0.08
SEC61A1-206ENST00000491668 OSBPL7Q9BZF2 842 aa14.54□□□□□ -0.08
SEC61A1-206ENST00000491668 RNPEPQ9H4A4 650 aa14.54□□□□□ -0.08
SEC61A1-206ENST00000491668 TMEM260Q9NX78 707 aa14.54□□□□□ -0.08
SEC61A1-206ENST00000491668 CYP46A1Q9Y6A2 500 aa14.54□□□□□ -0.08
SEC61A1-206ENST00000491668 GSTTP1A0A1W2PQM5 241 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 SPDYE3A6NKU9 549 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 NOP56O00567 594 aaKnown RBP14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 TREHO43280 583 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 ARHGEF15O94989 841 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 FOSL2P15408 326 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 CLK2P49760 499 aaKnown RBP14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 METAP2P50579 478 aaKnown RBP eCLIP14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 EVCP57679 992 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 ADAM17P78536 824 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 ADGRE1Q14246 886 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 NTRK3Q16288 839 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 PKN1Q16512 942 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 PPP1R18Q6NYC8 613 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 CCDC155Q8N6L0 562 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 USP38Q8NB14 1042 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 FTOQ9C0B1 505 aaKnown RBP eCLIP14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 PRDM12Q9H4Q4 367 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 JADE2Q9NQC1 790 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 PKD2L1Q9P0L9 805 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 MSRAQ9UJ68 235 aa14.53□□□□□ -0.08
SEC61A1-206ENST00000491668 PCDHA11Q9Y5I1 949 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms