RNA–Protein interactions for RNA: ENST00000459711.5

CHRD-207, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 503 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-207ENST00000459711 IFIH1Q9BYX4 1025 aaKnown RBP23.18■■□□□ 1.3
CHRD-207ENST00000459711 KAT14Q9H8E8 782 aa23.18■■□□□ 1.3
CHRD-207ENST00000459711 TECTAO75443 2155 aa23.18■■□□□ 1.3
CHRD-207ENST00000459711 C5orf67F2Z3F1 127 aa23.17■■□□□ 1.3
CHRD-207ENST00000459711 H3BRB1 525 aa23.17■■□□□ 1.3
CHRD-207ENST00000459711 TREHO43280 583 aa23.17■■□□□ 1.3
CHRD-207ENST00000459711 DHX16O60231 1041 aaKnown RBP23.17■■□□□ 1.3
CHRD-207ENST00000459711 CTSHP09668 335 aa23.17■■□□□ 1.3
CHRD-207ENST00000459711 SMIM10L2AP0DMW4 78 aa23.17■■□□□ 1.3
CHRD-207ENST00000459711 SMIM10L2BP0DMW5 78 aa23.17■■□□□ 1.3
CHRD-207ENST00000459711 SP2Q02086 613 aa23.17■■□□□ 1.3
CHRD-207ENST00000459711 STOX1Q6ZVD7 989 aa23.17■■□□□ 1.3
CHRD-207ENST00000459711 IQCA1Q86XH1 822 aa23.17■■□□□ 1.3
CHRD-207ENST00000459711 TUT1Q9H6E5 874 aaKnown RBP23.17■■□□□ 1.3
CHRD-207ENST00000459711 MAP3K20Q9NYL2 800 aaKnown RBP23.17■■□□□ 1.3
CHRD-207ENST00000459711 TGFB3P10600 412 aa23.16■■□□□ 1.3
CHRD-207ENST00000459711 PDE1AP54750 535 aa23.16■■□□□ 1.3
CHRD-207ENST00000459711 HERC4Q5GLZ8 1057 aaPredicted RBP23.16■■□□□ 1.3
CHRD-207ENST00000459711 VSIG10LQ86VR7 867 aa23.16■■□□□ 1.3
CHRD-207ENST00000459711 APBB2Q92870 758 aa23.16■■□□□ 1.3
CHRD-207ENST00000459711 MFSD14AQ96MC6 490 aa23.16■■□□□ 1.3
CHRD-207ENST00000459711 POP1Q99575 1024 aaKnown RBP23.16■■□□□ 1.3
CHRD-207ENST00000459711 AMNQ9BXJ7 453 aa23.16■■□□□ 1.3
CHRD-207ENST00000459711 LMAN2LQ9H0V9 348 aa23.16■■□□□ 1.3
CHRD-207ENST00000459711 RNPEPQ9H4A4 650 aa23.16■■□□□ 1.3
CHRD-207ENST00000459711 VAT1LQ9HCJ6 419 aa23.16■■□□□ 1.3
CHRD-207ENST00000459711 LAMA4Q16363 1823 aa23.16■■□□□ 1.3
CHRD-207ENST00000459711 MBTPS2O43462 519 aa23.15■■□□□ 1.3
CHRD-207ENST00000459711 KDM4AO75164 1064 aa23.15■■□□□ 1.3
CHRD-207ENST00000459711 LGALS2P05162 132 aa23.15■■□□□ 1.3
CHRD-207ENST00000459711 RB1P06400 928 aa23.15■■□□□ 1.3
CHRD-207ENST00000459711 PARP1P09874 1014 aaKnown RBP23.15■■□□□ 1.3
CHRD-207ENST00000459711 LINC00271P0C7V0 271 aa23.15■■□□□ 1.3
CHRD-207ENST00000459711 CTNNB1P35222 781 aa23.15■■□□□ 1.3
CHRD-207ENST00000459711 PGM5Q15124 567 aa23.15■■□□□ 1.3
CHRD-207ENST00000459711 IL31RAQ8NI17 732 aa23.15■■□□□ 1.3
CHRD-207ENST00000459711 MLXIPQ9HAP2 919 aa23.15■■□□□ 1.3
CHRD-207ENST00000459711 DLX2Q07687 328 aaPredicted RBP23.14■■□□□ 1.29
CHRD-207ENST00000459711 HYAL1Q12794 435 aa23.14■■□□□ 1.29
CHRD-207ENST00000459711 FIBCD1Q8N539 461 aa23.14■■□□□ 1.29
CHRD-207ENST00000459711 ENAHQ8N8S7 591 aaPredicted RBP23.14■■□□□ 1.29
CHRD-207ENST00000459711 GPKOWQ92917 476 aaPredicted RBP eCLIP23.14■■□□□ 1.29
CHRD-207ENST00000459711 IL17RAQ96F46 866 aa23.14■■□□□ 1.29
CHRD-207ENST00000459711 ZSCAN10Q96SZ4 725 aaPredicted RBP23.14■■□□□ 1.29
CHRD-207ENST00000459711 ZBTB47Q9UFB7 747 aaPredicted RBP23.14■■□□□ 1.29
CHRD-207ENST00000459711 MUTYHQ9UIF7 546 aa23.14■■□□□ 1.29
CHRD-207ENST00000459711 ZNF213O14771 459 aa23.13■■□□□ 1.29
CHRD-207ENST00000459711 BMPR1AP36894 532 aa23.13■■□□□ 1.29
CHRD-207ENST00000459711 CLUL1Q15846 466 aa23.13■■□□□ 1.29
CHRD-207ENST00000459711 ANKRD45Q5TZF3 282 aa23.13■■□□□ 1.29
CHRD-207ENST00000459711 SAMD3Q8N6K7 520 aa23.13■■□□□ 1.29
CHRD-207ENST00000459711 C11orf84Q9BUA3 381 aaPredicted RBP23.13■■□□□ 1.29
CHRD-207ENST00000459711 RWDD3Q9Y3V2 267 aa23.13■■□□□ 1.29
CHRD-207ENST00000459711 GRM6O15303 877 aa23.12■■□□□ 1.29
CHRD-207ENST00000459711 PPP1R11O60927 126 aaPredicted RBP23.12■■□□□ 1.29
CHRD-207ENST00000459711 HOXA13P31271 388 aaPredicted RBP23.12■■□□□ 1.29
CHRD-207ENST00000459711 SMAD4Q13485 552 aaKnown RBP23.12■■□□□ 1.29
CHRD-207ENST00000459711 FAM26DQ5JW98 314 aa23.12■■□□□ 1.29
CHRD-207ENST00000459711 RNF135Q8IUD6 432 aa23.12■■□□□ 1.29
CHRD-207ENST00000459711 MTMR8Q96EF0 704 aa23.12■■□□□ 1.29
CHRD-207ENST00000459711 SNX27Q96L92 541 aa23.12■■□□□ 1.29
CHRD-207ENST00000459711 RC3H2Q9HBD1 1191 aaKnown RBP23.12■■□□□ 1.29
CHRD-207ENST00000459711 ADGRA3Q8IWK6 1321 aa23.11■■□□□ 1.29
CHRD-207ENST00000459711 TRIM6-TRIM34B2RNG4 842 aa23.11■■□□□ 1.29
CHRD-207ENST00000459711 B4E1Z4 1266 aa23.11■■□□□ 1.29
CHRD-207ENST00000459711 TBX10O75333 385 aa23.11■■□□□ 1.29
CHRD-207ENST00000459711 GNAT1P11488 350 aa23.11■■□□□ 1.29
CHRD-207ENST00000459711 CCND2P30279 289 aa23.11■■□□□ 1.29
CHRD-207ENST00000459711 MFAP1P55081 439 aaKnown RBP23.11■■□□□ 1.29
CHRD-207ENST00000459711 STAG2Q8N3U4 1231 aa23.11■■□□□ 1.29
CHRD-207ENST00000459711 USP26Q9BXU7 913 aa23.11■■□□□ 1.29
CHRD-207ENST00000459711 BCAS3Q9H6U6 928 aa23.11■■□□□ 1.29
CHRD-207ENST00000459711 SETD4Q9NVD3 440 aa23.11■■□□□ 1.29
CHRD-207ENST00000459711 NOP56O00567 594 aaKnown RBP23.1■■□□□ 1.29
CHRD-207ENST00000459711 ADAM17P78536 824 aa23.1■■□□□ 1.29
CHRD-207ENST00000459711 CLP1Q92989 425 aaKnown RBP23.1■■□□□ 1.29
CHRD-207ENST00000459711 ZFP91Q96JP5 570 aaPredicted RBP23.1■■□□□ 1.29
CHRD-207ENST00000459711 PCDHA1Q9Y5I3 950 aa23.1■■□□□ 1.29
CHRD-207ENST00000459711 USP34Q70CQ2 3546 aa23.09■■□□□ 1.29
CHRD-207ENST00000459711 ZBTB5O15062 677 aa23.09■■□□□ 1.29
CHRD-207ENST00000459711 BMP8AQ7Z5Y6 402 aa23.09■■□□□ 1.29
CHRD-207ENST00000459711 EDAQ92838 391 aa23.09■■□□□ 1.29
CHRD-207ENST00000459711 PHOX2BQ99453 314 aa23.09■■□□□ 1.29
CHRD-207ENST00000459711 ZSWIM5Q9P217 1185 aa23.09■■□□□ 1.29
CHRD-207ENST00000459711 ZDBF2Q9HCK1 2354 aa23.09■■□□□ 1.29
CHRD-207ENST00000459711 TTC3P53804 2025 aa23.08■■□□□ 1.29
CHRD-207ENST00000459711 STXBP3O00186 592 aa23.08■■□□□ 1.29
CHRD-207ENST00000459711 MMP1P03956 469 aa23.08■■□□□ 1.29
CHRD-207ENST00000459711 GTF2F1P35269 517 aaKnown RBP eCLIP23.08■■□□□ 1.29
CHRD-207ENST00000459711 METTL7BQ6UX53 244 aa23.08■■□□□ 1.29
CHRD-207ENST00000459711 PRSS33Q8NF86 280 aa23.08■■□□□ 1.29
CHRD-207ENST00000459711 CD207Q9UJ71 328 aa23.08■■□□□ 1.29
CHRD-207ENST00000459711 DOCK5Q9H7D0 1870 aa23.08■■□□□ 1.29
CHRD-207ENST00000459711 KAT6AQ92794 2004 aa23.08■■□□□ 1.28
CHRD-207ENST00000459711 KLRF2D3W0D1 207 aa23.07■■□□□ 1.28
CHRD-207ENST00000459711 LINC01565O15544 149 aa23.07■■□□□ 1.28
CHRD-207ENST00000459711 ICAM3P32942 547 aa23.07■■□□□ 1.28
CHRD-207ENST00000459711 GNPTABQ3T906 1256 aa23.07■■□□□ 1.28
CHRD-207ENST00000459711 TRIM50Q86XT4 487 aa23.07■■□□□ 1.28
CHRD-207ENST00000459711 LMBR1Q8WVP7 490 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms