RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 FAM86B2P0C5J1 330 aa16.16■□□□□ 0.18
HDAC4-205ENST00000454542 FAAP100Q0VG06 881 aa16.16■□□□□ 0.18
HDAC4-205ENST00000454542 SESTD1Q86VW0 696 aa16.16■□□□□ 0.18
HDAC4-205ENST00000454542 CCDC83Q8IWF9 413 aa16.16■□□□□ 0.18
HDAC4-205ENST00000454542 GIMAP8Q8ND71 665 aaPredicted RBP16.16■□□□□ 0.18
HDAC4-205ENST00000454542 LENG9Q96B70 501 aa16.16■□□□□ 0.18
HDAC4-205ENST00000454542 GPR20Q99678 358 aa16.16■□□□□ 0.18
HDAC4-205ENST00000454542 GDF15Q99988 308 aa16.16■□□□□ 0.18
HDAC4-205ENST00000454542 ALG1Q9BT22 464 aa16.16■□□□□ 0.18
HDAC4-205ENST00000454542 KCNH7Q9NS40 1196 aa16.16■□□□□ 0.18
HDAC4-205ENST00000454542 TRIM43BA6NCK2 446 aa16.15■□□□□ 0.18
HDAC4-205ENST00000454542 PPFIA4O75335 1185 aa16.15■□□□□ 0.18
HDAC4-205ENST00000454542 SYN1P17600 705 aa16.15■□□□□ 0.18
HDAC4-205ENST00000454542 RANBP2P49792 3224 aaKnown RBP16.15■□□□□ 0.18
HDAC4-205ENST00000454542 SETQ01105 290 aaPredicted RBP16.15■□□□□ 0.18
HDAC4-205ENST00000454542 PTPN11Q06124 597 aaPredicted RBP16.15■□□□□ 0.18
HDAC4-205ENST00000454542 NFRKBQ6P4R8 1299 aa16.15■□□□□ 0.18
HDAC4-205ENST00000454542 CYFIP1Q7L576 1253 aa16.15■□□□□ 0.18
HDAC4-205ENST00000454542 SH3RF1Q7Z6J0 888 aa16.15■□□□□ 0.18
HDAC4-205ENST00000454542 TRIM43Q96BQ3 446 aaPredicted RBP16.15■□□□□ 0.18
HDAC4-205ENST00000454542 C16orf70Q9BSU1 422 aa16.15■□□□□ 0.18
HDAC4-205ENST00000454542 MLXIPQ9HAP2 919 aa16.15■□□□□ 0.18
HDAC4-205ENST00000454542 AGO4Q9HCK5 861 aaKnown RBP16.15■□□□□ 0.18
HDAC4-205ENST00000454542 GJB4Q9NTQ9 266 aa16.15■□□□□ 0.18
HDAC4-205ENST00000454542 KCNJ14Q9UNX9 436 aa16.15■□□□□ 0.18
HDAC4-205ENST00000454542 TELO2Q9Y4R8 837 aa16.15■□□□□ 0.18
HDAC4-205ENST00000454542 DCDC2CA8MYV0 355 aa16.14■□□□□ 0.17
HDAC4-205ENST00000454542 LGALS2P05162 132 aa16.14■□□□□ 0.17
HDAC4-205ENST00000454542 ZNF286BP0CG31 522 aa16.14■□□□□ 0.17
HDAC4-205ENST00000454542 ARP10275 920 aa16.14■□□□□ 0.17
HDAC4-205ENST00000454542 XBP1P17861 261 aa16.14■□□□□ 0.17
HDAC4-205ENST00000454542 ITGB3BPQ13352 177 aaPredicted RBP16.14■□□□□ 0.17
HDAC4-205ENST00000454542 NBPF20Q3BBV1 942 aa16.14■□□□□ 0.17
HDAC4-205ENST00000454542 TNFRSF25Q93038 417 aa16.14■□□□□ 0.17
HDAC4-205ENST00000454542 MBOAT7Q96N66 472 aa16.14■□□□□ 0.17
HDAC4-205ENST00000454542 KATNAL1Q9BW62 490 aa16.14■□□□□ 0.17
HDAC4-205ENST00000454542 SORBS3O60504 671 aa16.13■□□□□ 0.17
HDAC4-205ENST00000454542 B4GALT4O60513 344 aa16.13■□□□□ 0.17
HDAC4-205ENST00000454542 ITGB8P26012 769 aa16.13■□□□□ 0.17
HDAC4-205ENST00000454542 HOXC8P31273 242 aa16.13■□□□□ 0.17
HDAC4-205ENST00000454542 BMP8BP34820 402 aa16.13■□□□□ 0.17
HDAC4-205ENST00000454542 MAGEA10P43363 369 aaPredicted RBP16.13■□□□□ 0.17
HDAC4-205ENST00000454542 MCM2P49736 904 aa16.13■□□□□ 0.17
HDAC4-205ENST00000454542 PSEN2P49810 448 aa16.13■□□□□ 0.17
HDAC4-205ENST00000454542 USP11P51784 963 aa16.13■□□□□ 0.17
HDAC4-205ENST00000454542 HMGN5P82970 282 aaKnown RBP16.13■□□□□ 0.17
HDAC4-205ENST00000454542 MOXD1Q6UVY6 613 aa16.13■□□□□ 0.17
HDAC4-205ENST00000454542 KRT25Q7Z3Z0 450 aa16.13■□□□□ 0.17
HDAC4-205ENST00000454542 TBCKQ8TEA7 893 aa16.13■□□□□ 0.17
HDAC4-205ENST00000454542 VTI1AQ96AJ9 217 aa16.13■□□□□ 0.17
HDAC4-205ENST00000454542 JPH1Q9HDC5 661 aaPredicted RBP16.13■□□□□ 0.17
HDAC4-205ENST00000454542 PCDH10Q9P2E7 1040 aa16.13■□□□□ 0.17
HDAC4-205ENST00000454542 EMSYQ7Z589 1322 aa16.13■□□□□ 0.17
HDAC4-205ENST00000454542 CYP3A7-CYP3A51PA0A087WV96 503 aa16.12■□□□□ 0.17
HDAC4-205ENST00000454542 NOP56O00567 594 aaKnown RBP16.12■□□□□ 0.17
HDAC4-205ENST00000454542 TLR3O15455 904 aaKnown RBP16.12■□□□□ 0.17
HDAC4-205ENST00000454542 MMP1P03956 469 aa16.12■□□□□ 0.17
HDAC4-205ENST00000454542 CYP3A7P24462 503 aa16.12■□□□□ 0.17
HDAC4-205ENST00000454542 MFSD10Q14728 455 aa16.12■□□□□ 0.17
HDAC4-205ENST00000454542 CHRDL2Q6WN34 429 aa16.12■□□□□ 0.17
HDAC4-205ENST00000454542 PLA2G4DQ86XP0 818 aa16.12■□□□□ 0.17
HDAC4-205ENST00000454542 OXER1Q8TDS5 423 aa16.12■□□□□ 0.17
HDAC4-205ENST00000454542 CTAGE1Q96RT6 745 aa16.12■□□□□ 0.17
HDAC4-205ENST00000454542 PRDM5Q9NQX1 630 aaPredicted RBP16.12■□□□□ 0.17
HDAC4-205ENST00000454542 A0A1W2PPC1 479 aa16.11■□□□□ 0.17
HDAC4-205ENST00000454542 GSTTP1A0A1W2PQM5 241 aa16.11■□□□□ 0.17
HDAC4-205ENST00000454542 DHX15O43143 795 aaKnown RBP16.11■□□□□ 0.17
HDAC4-205ENST00000454542 ZNF76P36508 570 aa16.11■□□□□ 0.17
HDAC4-205ENST00000454542 NONOQ15233 471 aaKnown RBP eCLIP16.11■□□□□ 0.17
HDAC4-205ENST00000454542 KIAA0753Q2KHM9 967 aa16.11■□□□□ 0.17
HDAC4-205ENST00000454542 Q4G0T1 1027 aa16.11■□□□□ 0.17
HDAC4-205ENST00000454542 TMX3Q96JJ7 454 aa16.11■□□□□ 0.17
HDAC4-205ENST00000454542 TMEM39AQ9NV64 488 aa16.11■□□□□ 0.17
HDAC4-205ENST00000454542 PKD2L1Q9P0L9 805 aa16.11■□□□□ 0.17
HDAC4-205ENST00000454542 SLC9A2Q9UBY0 812 aa16.11■□□□□ 0.17
HDAC4-205ENST00000454542 PRKAG2Q9UGJ0 569 aa16.11■□□□□ 0.17
HDAC4-205ENST00000454542 GTF2IRD1Q9UHL9 959 aa16.11■□□□□ 0.17
HDAC4-205ENST00000454542 LGR5O75473 907 aa16.1■□□□□ 0.17
HDAC4-205ENST00000454542 ATG7O95352 703 aa16.1■□□□□ 0.17
HDAC4-205ENST00000454542 KRT2P35908 639 aa16.1■□□□□ 0.17
HDAC4-205ENST00000454542 EARS2Q5JPH6 523 aaKnown RBP16.1■□□□□ 0.17
HDAC4-205ENST00000454542 KRT40Q6A162 431 aa16.1■□□□□ 0.17
HDAC4-205ENST00000454542 TRIM50Q86XT4 487 aa16.1■□□□□ 0.17
HDAC4-205ENST00000454542 PCYT2Q99447 389 aa16.1■□□□□ 0.17
HDAC4-205ENST00000454542 SDF4Q9BRK5 362 aa16.1■□□□□ 0.17
HDAC4-205ENST00000454542 NOC4LQ9BVI4 516 aaKnown RBP16.1■□□□□ 0.17
HDAC4-205ENST00000454542 TRPV6Q9H1D0 765 aa16.1■□□□□ 0.17
HDAC4-205ENST00000454542 TRMT13Q9NUP7 481 aaKnown RBP16.1■□□□□ 0.17
HDAC4-205ENST00000454542 COLQQ9Y215 455 aaPredicted RBP16.1■□□□□ 0.17
HDAC4-205ENST00000454542 WDR81Q562E7 1941 aa16.09■□□□□ 0.17
HDAC4-205ENST00000454542 H3BRB1 525 aa16.09■□□□□ 0.17
HDAC4-205ENST00000454542 IPO5O00410 1097 aaKnown RBP16.09■□□□□ 0.17
HDAC4-205ENST00000454542 TDP2O95551 362 aa16.09■□□□□ 0.17
HDAC4-205ENST00000454542 CCNE2O96020 404 aa16.09■□□□□ 0.17
HDAC4-205ENST00000454542 TIMP1P01033 207 aa16.09■□□□□ 0.17
HDAC4-205ENST00000454542 TCF7P36402 384 aaPredicted RBP16.09■□□□□ 0.17
HDAC4-205ENST00000454542 RBL2Q08999 1139 aa16.09■□□□□ 0.17
HDAC4-205ENST00000454542 NR5A1Q13285 461 aa16.09■□□□□ 0.17
HDAC4-205ENST00000454542 INF2Q27J81 1249 aa16.09■□□□□ 0.17
HDAC4-205ENST00000454542 PRR16Q569H4 304 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms