RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 NUDT12Q9BQG2 462 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 UBIAD1Q9Y5Z9 338 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 MCM3APO60318 1980 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 NR3C2P08235 984 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 PRR29P0C7W0 189 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 PLCG1P19174 1290 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 GTF2F1P35269 517 aaKnown RBP eCLIP16.81■□□□□ 0.28
CALD1-206ENST00000424922 CNTN2Q02246 1040 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 SPIRE1Q08AE8 756 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 NAALADL2Q58DX5 795 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 NT5DC1Q5TFE4 455 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 ANKRD13CQ8N6S4 541 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 SNX29Q8TEQ0 813 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 CCDC34Q96HJ3 373 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 ZNF577Q9BSK1 485 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 ABT1Q9ULW3 272 aaKnown RBP16.81■□□□□ 0.28
CALD1-206ENST00000424922 TLL2Q9Y6L7 1015 aa16.81■□□□□ 0.28
CALD1-206ENST00000424922 PLXNB2O15031 1838 aa16.8■□□□□ 0.28
CALD1-206ENST00000424922 CCND2P30279 289 aa16.8■□□□□ 0.28
CALD1-206ENST00000424922 COPB2P35606 906 aa16.8■□□□□ 0.28
CALD1-206ENST00000424922 WDR78Q5VTH9 848 aa16.8■□□□□ 0.28
CALD1-206ENST00000424922 VSIG10LQ86VR7 867 aa16.8■□□□□ 0.28
CALD1-206ENST00000424922 TRIML1Q8N9V2 468 aa16.8■□□□□ 0.28
CALD1-206ENST00000424922 GPRC5AQ8NFJ5 357 aa16.8■□□□□ 0.28
CALD1-206ENST00000424922 STAMQ92783 540 aa16.8■□□□□ 0.28
CALD1-206ENST00000424922 SLC5A5Q92911 643 aa16.8■□□□□ 0.28
CALD1-206ENST00000424922 KCNH7Q9NS40 1196 aa16.8■□□□□ 0.28
CALD1-206ENST00000424922 PLXNA1Q9UIW2 1896 aa16.8■□□□□ 0.28
CALD1-206ENST00000424922 TESPA1A2RU30 521 aaPredicted RBP16.79■□□□□ 0.28
CALD1-206ENST00000424922 MYL5Q02045 173 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 LRCH2Q5VUJ6 765 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 NCAPH2Q6IBW4 605 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 NIPA1Q7RTP0 329 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 SH3RF1Q7Z6J0 888 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 LRRC15Q8TF66 581 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 CDK5RAP3Q96JB5 506 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 JADE2Q9NQC1 790 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 KCND1Q9NSA2 647 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 VAV3Q9UKW4 847 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 PCDHA5Q9Y5H7 936 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 WDR81Q562E7 1941 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 IPO5O00410 1097 aaKnown RBP16.79■□□□□ 0.28
CALD1-206ENST00000424922 BCRP11274 1271 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 SARSP49591 514 aaKnown RBP16.79■□□□□ 0.28
CALD1-206ENST00000424922 GRB10Q13322 594 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 MTMR1Q13613 665 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 XRRA1Q6P2D8 792 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 PARK7Q99497 189 aaKnown RBP16.79■□□□□ 0.28
CALD1-206ENST00000424922 PORCNQ9H237 461 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 MROH8Q9H579 483 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 PKD2L1Q9P0L9 805 aa16.79■□□□□ 0.28
CALD1-206ENST00000424922 MANSC4A6NHS7 340 aaPredicted RBP16.78■□□□□ 0.28
CALD1-206ENST00000424922 POTEB2H3BUK9 544 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 GAS7O60861 476 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 PSMD10O75832 226 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 TOMM70O94826 608 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 SLC10A3P09131 477 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 CASP1P29466 404 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 CCT6AP40227 531 aaKnown RBP16.78■□□□□ 0.28
CALD1-206ENST00000424922 GCLCP48506 637 aaPredicted RBP16.78■□□□□ 0.28
CALD1-206ENST00000424922 ISM2Q6H9L7 571 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 DNERQ8NFT8 737 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 PNMA5Q96PV4 448 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 MTRQ99707 1265 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 XPO4Q9C0E2 1151 aaKnown RBP16.78■□□□□ 0.28
CALD1-206ENST00000424922 ASTN1O14525 1302 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 DOCK3Q8IZD9 2030 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 TMEM88BA6NKF7 163 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 IGF2BP3O00425 579 aaKnown RBP eCLIP16.78■□□□□ 0.28
CALD1-206ENST00000424922 ECM1Q16610 540 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 OTOP1Q7RTM1 612 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 CCDC150Q8NCX0 1101 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 MMP19Q99542 508 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 HSD3B7Q9H2F3 369 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 EFCC1Q9HA90 598 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 IFNKQ9P0W0 207 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 DACH1Q9UI36 760 aa16.78■□□□□ 0.28
CALD1-206ENST00000424922 CBFA2T2O43439 604 aa16.77■□□□□ 0.28
CALD1-206ENST00000424922 CHMP2AO43633 222 aa16.77■□□□□ 0.28
CALD1-206ENST00000424922 PGK2P07205 417 aa16.77■□□□□ 0.28
CALD1-206ENST00000424922 CCNA1P78396 465 aa16.77■□□□□ 0.28
CALD1-206ENST00000424922 FANCCQ00597 558 aa16.77■□□□□ 0.28
CALD1-206ENST00000424922 KCTD2Q14681 263 aa16.77■□□□□ 0.28
CALD1-206ENST00000424922 CT47A1Q5JQC4 288 aaPredicted RBP16.77■□□□□ 0.28
CALD1-206ENST00000424922 MLKLQ8NB16 471 aa16.77■□□□□ 0.28
CALD1-206ENST00000424922 SHCBP1Q8NEM2 672 aa16.77■□□□□ 0.28
CALD1-206ENST00000424922 AGO4Q9HCK5 861 aaKnown RBP16.77■□□□□ 0.28
CALD1-206ENST00000424922 SOWAHBA6NEL2 793 aa16.76■□□□□ 0.27
CALD1-206ENST00000424922 FAM155AB1AL88 458 aaPredicted RBP16.76■□□□□ 0.27
CALD1-206ENST00000424922 EML1O00423 815 aa16.76■□□□□ 0.27
CALD1-206ENST00000424922 SMC2O95347 1197 aa16.76■□□□□ 0.27
CALD1-206ENST00000424922 FCER1AP12319 257 aa16.76■□□□□ 0.27
CALD1-206ENST00000424922 ALDH5A1P51649 535 aaPredicted RBP16.76■□□□□ 0.27
CALD1-206ENST00000424922 CCZ1BP86790 482 aa16.76■□□□□ 0.27
CALD1-206ENST00000424922 CCZ1P86791 482 aaPredicted RBP16.76■□□□□ 0.27
CALD1-206ENST00000424922 PPP2R5CQ13362 524 aa16.76■□□□□ 0.27
CALD1-206ENST00000424922 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.76■□□□□ 0.27
CALD1-206ENST00000424922 FAM133AQ8N9E0 248 aa16.76■□□□□ 0.27
CALD1-206ENST00000424922 ERMNQ8TAM6 284 aa16.76■□□□□ 0.27
CALD1-206ENST00000424922 SPATA20Q8TB22 786 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms