RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 CRY2Q49AN0 593 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 HYIQ5T013 277 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 FAM83BQ5T0W9 1011 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 C8orf74Q6P047 294 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 GJA10Q969M2 543 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 NT5C3AQ9H0P0 336 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 BMP2KQ9NSY1 1161 aaPredicted RBP20.38■□□□□ 0.85
EWSR1-207ENST00000406548 RSPH14Q9UHP6 348 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 C10orf71Q711Q0 1435 aa20.38■□□□□ 0.85
EWSR1-207ENST00000406548 TLR2O60603 784 aa20.37■□□□□ 0.85
EWSR1-207ENST00000406548 SHOX2O60902 331 aaPredicted RBP20.37■□□□□ 0.85
EWSR1-207ENST00000406548 NAP1L1P55209 391 aaKnown RBP20.37■□□□□ 0.85
EWSR1-207ENST00000406548 EMBQ6PCB8 327 aa20.37■□□□□ 0.85
EWSR1-207ENST00000406548 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.37■□□□□ 0.85
EWSR1-207ENST00000406548 FGFBP2Q9BYJ0 223 aa20.37■□□□□ 0.85
EWSR1-207ENST00000406548 LUC7LQ9NQ29 371 aaKnown RBP20.37■□□□□ 0.85
EWSR1-207ENST00000406548 RBM12Q9NTZ6 932 aaKnown RBP20.37■□□□□ 0.85
EWSR1-207ENST00000406548 ATAD5Q96QE3 1844 aa20.37■□□□□ 0.85
EWSR1-207ENST00000406548 GNA14O95837 355 aa20.37■□□□□ 0.85
EWSR1-207ENST00000406548 SSBP05455 408 aaKnown RBP eCLIP20.37■□□□□ 0.85
EWSR1-207ENST00000406548 TMC4Q7Z404 712 aa20.37■□□□□ 0.85
EWSR1-207ENST00000406548 PCDHA12Q9UN75 941 aa20.37■□□□□ 0.85
EWSR1-207ENST00000406548 MRPL12P52815 198 aaKnown RBP20.36■□□□□ 0.85
EWSR1-207ENST00000406548 MARSP56192 900 aaKnown RBP20.36■□□□□ 0.85
EWSR1-207ENST00000406548 POLR2FP61218 127 aaKnown RBP20.36■□□□□ 0.85
EWSR1-207ENST00000406548 CFAP221Q4G0U5 840 aa20.36■□□□□ 0.85
EWSR1-207ENST00000406548 TTBK2Q6IQ55 1244 aa20.36■□□□□ 0.85
EWSR1-207ENST00000406548 CCDC65Q8IXS2 484 aa20.36■□□□□ 0.85
EWSR1-207ENST00000406548 TBC1D16Q8TBP0 767 aa20.36■□□□□ 0.85
EWSR1-207ENST00000406548 SH3GL2Q99962 352 aa20.36■□□□□ 0.85
EWSR1-207ENST00000406548 TBC1D7Q9P0N9 293 aa20.36■□□□□ 0.85
EWSR1-207ENST00000406548 RNF14Q9UBS8 474 aa20.36■□□□□ 0.85
EWSR1-207ENST00000406548 POLLQ9UGP5 575 aa20.36■□□□□ 0.85
EWSR1-207ENST00000406548 ATP6V0A2Q9Y487 856 aa20.36■□□□□ 0.85
EWSR1-207ENST00000406548 GOLGA8KD6RF30 607 aa20.35■□□□□ 0.85
EWSR1-207ENST00000406548 GLE1Q53GS7 698 aaKnown RBP20.35■□□□□ 0.85
EWSR1-207ENST00000406548 TRIM59Q8IWR1 403 aa20.35■□□□□ 0.85
EWSR1-207ENST00000406548 CAVIN3Q969G5 261 aa20.35■□□□□ 0.85
EWSR1-207ENST00000406548 RBM17Q96I25 401 aaKnown RBP20.35■□□□□ 0.85
EWSR1-207ENST00000406548 GJD4Q96KN9 370 aaPredicted RBP20.35■□□□□ 0.85
EWSR1-207ENST00000406548 TRIM34Q9BYJ4 488 aa20.35■□□□□ 0.85
EWSR1-207ENST00000406548 PODXL2Q9NZ53 605 aa20.35■□□□□ 0.85
EWSR1-207ENST00000406548 PCDHA2Q9Y5H9 948 aa20.35■□□□□ 0.85
EWSR1-207ENST00000406548 E9PMD0 336 aa20.35■□□□□ 0.85
EWSR1-207ENST00000406548 MEX3CQ5U5Q3 659 aaKnown RBP20.35■□□□□ 0.85
EWSR1-207ENST00000406548 AEBP2Q6ZN18 517 aaPredicted RBP20.35■□□□□ 0.85
EWSR1-207ENST00000406548 FAM196AQ6ZSG2 479 aa20.35■□□□□ 0.85
EWSR1-207ENST00000406548 NELFCDQ8IXH7 590 aa20.35■□□□□ 0.85
EWSR1-207ENST00000406548 PLEKHA4Q9H4M7 779 aa20.35■□□□□ 0.85
EWSR1-207ENST00000406548 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.35■□□□□ 0.85
EWSR1-207ENST00000406548 ZBTB5O15062 677 aa20.34■□□□□ 0.85
EWSR1-207ENST00000406548 OPA1O60313 960 aa20.34■□□□□ 0.85
EWSR1-207ENST00000406548 MS4A14Q96JA4 679 aa20.34■□□□□ 0.85
EWSR1-207ENST00000406548 NAP1L4Q99733 375 aaKnown RBP20.34■□□□□ 0.85
EWSR1-207ENST00000406548 PSTPIP2Q9H939 334 aa20.34■□□□□ 0.85
EWSR1-207ENST00000406548 KIAA1024Q9UPX6 916 aa20.34■□□□□ 0.85
EWSR1-207ENST00000406548 PALMO75781 387 aa20.34■□□□□ 0.85
EWSR1-207ENST00000406548 PLA2G4BP0C869 781 aa20.34■□□□□ 0.85
EWSR1-207ENST00000406548 NAB2Q15742 525 aa20.34■□□□□ 0.85
EWSR1-207ENST00000406548 GPATCH4Q5T3I0 446 aaKnown RBP20.34■□□□□ 0.85
EWSR1-207ENST00000406548 GPBP1Q86WP2 473 aa20.34■□□□□ 0.85
EWSR1-207ENST00000406548 TSEN2Q8NCE0 465 aaKnown RBP20.34■□□□□ 0.85
EWSR1-207ENST00000406548 DDX4Q9NQI0 724 aaKnown RBP20.34■□□□□ 0.85
EWSR1-207ENST00000406548 SWAP70Q9UH65 585 aa20.34■□□□□ 0.85
EWSR1-207ENST00000406548 SERPINB13Q9UIV8 391 aa20.34■□□□□ 0.85
EWSR1-207ENST00000406548 ATF5Q9Y2D1 282 aaPredicted RBP20.34■□□□□ 0.85
EWSR1-207ENST00000406548 MYO3BQ8WXR4 1341 aa20.34■□□□□ 0.85
EWSR1-207ENST00000406548 MYH4Q9Y623 1939 aa20.34■□□□□ 0.85
EWSR1-207ENST00000406548 USP17L10C9JJH3 530 aa20.33■□□□□ 0.85
EWSR1-207ENST00000406548 SLC16A2P36021 539 aa20.33■□□□□ 0.85
EWSR1-207ENST00000406548 PPFIA1Q13136 1202 aa20.33■□□□□ 0.85
EWSR1-207ENST00000406548 NNTQ13423 1086 aa20.33■□□□□ 0.85
EWSR1-207ENST00000406548 RAPGEF1Q13905 1077 aa20.33■□□□□ 0.85
EWSR1-207ENST00000406548 SLC18A3Q16572 532 aa20.33■□□□□ 0.85
EWSR1-207ENST00000406548 ALS2CLQ60I27 953 aa20.33■□□□□ 0.85
EWSR1-207ENST00000406548 SCFD1Q8WVM8 642 aa20.33■□□□□ 0.85
EWSR1-207ENST00000406548 TBC1D5Q92609 795 aa20.33■□□□□ 0.85
EWSR1-207ENST00000406548 KCTD10Q9H3F6 313 aa20.33■□□□□ 0.85
EWSR1-207ENST00000406548 AFF2P51816 1311 aa20.33■□□□□ 0.85
EWSR1-207ENST00000406548 GREB1LQ9C091 1923 aaPredicted RBP20.33■□□□□ 0.84
EWSR1-207ENST00000406548 POTEB3A0JP26 581 aa20.33■□□□□ 0.84
EWSR1-207ENST00000406548 POTECB2RU33 542 aa20.33■□□□□ 0.84
EWSR1-207ENST00000406548 KLRC1P26715 233 aa20.33■□□□□ 0.84
EWSR1-207ENST00000406548 GTF2IP78347 998 aa20.33■□□□□ 0.84
EWSR1-207ENST00000406548 APBA1Q02410 837 aa20.33■□□□□ 0.84
EWSR1-207ENST00000406548 HERC4Q5GLZ8 1057 aaPredicted RBP20.33■□□□□ 0.84
EWSR1-207ENST00000406548 FAM182BQ5T319 152 aa20.33■□□□□ 0.84
EWSR1-207ENST00000406548 POTEBQ6S5H4 581 aa20.33■□□□□ 0.84
EWSR1-207ENST00000406548 ZC3H3Q8IXZ2 948 aaKnown RBP20.33■□□□□ 0.84
EWSR1-207ENST00000406548 LTBP1Q14766 1721 aa20.32■□□□□ 0.84
EWSR1-207ENST00000406548 NPHP3-ACAD11A0A0J9YXS1 232 aa20.32■□□□□ 0.84
EWSR1-207ENST00000406548 HSF2BPO75031 334 aa20.32■□□□□ 0.84
EWSR1-207ENST00000406548 BBOX1O75936 387 aa20.32■□□□□ 0.84
EWSR1-207ENST00000406548 EPB41P11171 864 aaKnown RBP20.32■□□□□ 0.84
EWSR1-207ENST00000406548 CACNB1Q02641 598 aaPredicted RBP20.32■□□□□ 0.84
EWSR1-207ENST00000406548 IFT20Q8IY31 132 aa20.32■□□□□ 0.84
EWSR1-207ENST00000406548 RUFY1Q96T51 708 aa20.32■□□□□ 0.84
EWSR1-207ENST00000406548 KANSL2Q9H9L4 492 aa20.32■□□□□ 0.84
EWSR1-207ENST00000406548 PCDHGC5Q9Y5F6 944 aa20.32■□□□□ 0.84
EWSR1-207ENST00000406548 QSER1Q2KHR3 1735 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms