RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 STAG2Q8N3U4 1231 aa15.24■□□□□ 0.03
CLCN6-205ENST00000376492 BANK1Q8NDB2 785 aa15.24■□□□□ 0.03
CLCN6-205ENST00000376492 ATP6V0A1Q93050 837 aa15.24■□□□□ 0.03
CLCN6-205ENST00000376492 DSCC1Q9BVC3 393 aa15.24■□□□□ 0.03
CLCN6-205ENST00000376492 BCAS3Q9H6U6 928 aa15.24■□□□□ 0.03
CLCN6-205ENST00000376492 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.23■□□□□ 0.03
CLCN6-205ENST00000376492 H3BNC9 293 aa15.23■□□□□ 0.03
CLCN6-205ENST00000376492 TREHO43280 583 aa15.23■□□□□ 0.03
CLCN6-205ENST00000376492 SMIM10L2AP0DMW4 78 aa15.23■□□□□ 0.03
CLCN6-205ENST00000376492 SMIM10L2BP0DMW5 78 aa15.23■□□□□ 0.03
CLCN6-205ENST00000376492 ALADP13716 330 aa15.23■□□□□ 0.03
CLCN6-205ENST00000376492 HOXC8P31273 242 aa15.23■□□□□ 0.03
CLCN6-205ENST00000376492 GHRHRQ02643 423 aa15.23■□□□□ 0.03
CLCN6-205ENST00000376492 ZP2Q05996 745 aa15.23■□□□□ 0.03
CLCN6-205ENST00000376492 GPM6BQ13491 265 aa15.23■□□□□ 0.03
CLCN6-205ENST00000376492 PGM5Q15124 567 aa15.23■□□□□ 0.03
CLCN6-205ENST00000376492 RUFY2Q8WXA3 655 aa15.23■□□□□ 0.03
CLCN6-205ENST00000376492 SEPT8Q92599 483 aa15.23■□□□□ 0.03
CLCN6-205ENST00000376492 PABPC5Q96DU9 382 aaKnown RBP15.23■□□□□ 0.03
CLCN6-205ENST00000376492 AMNQ9BXJ7 453 aa15.23■□□□□ 0.03
CLCN6-205ENST00000376492 IL25Q9H293 177 aa15.23■□□□□ 0.03
CLCN6-205ENST00000376492 ZSWIM5Q9P217 1185 aa15.23■□□□□ 0.03
CLCN6-205ENST00000376492 CTNNA3Q9UI47 895 aa15.23■□□□□ 0.03
CLCN6-205ENST00000376492 DCXO43602 365 aa15.22■□□□□ 0.03
CLCN6-205ENST00000376492 LGALS2P05162 132 aa15.22■□□□□ 0.03
CLCN6-205ENST00000376492 CSPP1Q1MSJ5 1256 aa15.22■□□□□ 0.03
CLCN6-205ENST00000376492 PUS10Q3MIT2 529 aaKnown RBP15.22■□□□□ 0.03
CLCN6-205ENST00000376492 CCDC178Q5BJE1 867 aa15.22■□□□□ 0.03
CLCN6-205ENST00000376492 STOX1Q6ZVD7 989 aa15.22■□□□□ 0.03
CLCN6-205ENST00000376492 VSIG10LQ86VR7 867 aa15.22■□□□□ 0.03
CLCN6-205ENST00000376492 TMEM192Q8IY95 271 aa15.22■□□□□ 0.03
CLCN6-205ENST00000376492 TOP1MTQ969P6 601 aa15.22■□□□□ 0.03
CLCN6-205ENST00000376492 SAMD11Q96NU1 681 aa15.22■□□□□ 0.03
CLCN6-205ENST00000376492 WDFY4Q6ZS81 3184 aa15.22■□□□□ 0.03
CLCN6-205ENST00000376492 MICAL3Q7RTP6 2002 aa15.21■□□□□ 0.03
CLCN6-205ENST00000376492 H3BRB1 525 aa15.21■□□□□ 0.03
CLCN6-205ENST00000376492 COL19A1Q14993 1142 aa15.21■□□□□ 0.03
CLCN6-205ENST00000376492 SLC35G1Q2M3R5 365 aa15.21■□□□□ 0.03
CLCN6-205ENST00000376492 BMP2KLQ5H9B9 411 aa15.21■□□□□ 0.03
CLCN6-205ENST00000376492 KCNV1Q6PIU1 500 aa15.21■□□□□ 0.03
CLCN6-205ENST00000376492 SKAP1Q86WV1 359 aa15.21■□□□□ 0.03
CLCN6-205ENST00000376492 TRIM50Q86XT4 487 aa15.21■□□□□ 0.03
CLCN6-205ENST00000376492 IFIH1Q9BYX4 1025 aaKnown RBP15.21■□□□□ 0.03
CLCN6-205ENST00000376492 RNPEPQ9H4A4 650 aa15.21■□□□□ 0.03
CLCN6-205ENST00000376492 NSUN3Q9H649 340 aaKnown RBP15.21■□□□□ 0.03
CLCN6-205ENST00000376492 TUT1Q9H6E5 874 aaKnown RBP15.21■□□□□ 0.03
CLCN6-205ENST00000376492 MLXIPQ9HAP2 919 aa15.21■□□□□ 0.03
CLCN6-205ENST00000376492 CLDND1Q9NY35 253 aa15.21■□□□□ 0.03
CLCN6-205ENST00000376492 TELO2Q9Y4R8 837 aa15.21■□□□□ 0.03
CLCN6-205ENST00000376492 PCDHA1Q9Y5I3 950 aa15.21■□□□□ 0.03
CLCN6-205ENST00000376492 LAMA4Q16363 1823 aa15.21■□□□□ 0.03
CLCN6-205ENST00000376492 COL4A6Q14031 1691 aa15.21■□□□□ 0.03
CLCN6-205ENST00000376492 POTEB3A0JP26 581 aa15.2■□□□□ 0.02
CLCN6-205ENST00000376492 ZBTB5O15062 677 aa15.2■□□□□ 0.02
CLCN6-205ENST00000376492 CCND2P30279 289 aa15.2■□□□□ 0.02
CLCN6-205ENST00000376492 MRE11P49959 708 aa15.2■□□□□ 0.02
CLCN6-205ENST00000376492 CLUL1Q15846 466 aa15.2■□□□□ 0.02
CLCN6-205ENST00000376492 POTEBQ6S5H4 581 aa15.2■□□□□ 0.02
CLCN6-205ENST00000376492 FCHSD1Q86WN1 690 aa15.2■□□□□ 0.02
CLCN6-205ENST00000376492 HOMER1Q86YM7 354 aa15.2■□□□□ 0.02
CLCN6-205ENST00000376492 MTMR8Q96EF0 704 aa15.2■□□□□ 0.02
CLCN6-205ENST00000376492 SETD4Q9NVD3 440 aa15.2■□□□□ 0.02
CLCN6-205ENST00000376492 C19orf67A6NJJ6 358 aa15.19■□□□□ 0.02
CLCN6-205ENST00000376492 KLRF2D3W0D1 207 aa15.19■□□□□ 0.02
CLCN6-205ENST00000376492 SGSM2O43147 1006 aa15.19■□□□□ 0.02
CLCN6-205ENST00000376492 CSPG5O95196 566 aa15.19■□□□□ 0.02
CLCN6-205ENST00000376492 LINC00271P0C7V0 271 aa15.19■□□□□ 0.02
CLCN6-205ENST00000376492 CTNNB1P35222 781 aa15.19■□□□□ 0.02
CLCN6-205ENST00000376492 LTBRP36941 435 aa15.19■□□□□ 0.02
CLCN6-205ENST00000376492 NT5C2P49902 561 aa15.19■□□□□ 0.02
CLCN6-205ENST00000376492 NHLH1Q02575 133 aa15.19■□□□□ 0.02
CLCN6-205ENST00000376492 IFIT1BQ5T764 474 aaKnown RBP15.19■□□□□ 0.02
CLCN6-205ENST00000376492 RPAINQ86UA6 219 aa15.19■□□□□ 0.02
CLCN6-205ENST00000376492 ADHFE1Q8IWW8 467 aa15.19■□□□□ 0.02
CLCN6-205ENST00000376492 FBXL18Q96ME1 805 aa15.19■□□□□ 0.02
CLCN6-205ENST00000376492 UBAC1Q9BSL1 405 aa15.19■□□□□ 0.02
CLCN6-205ENST00000376492 MAD2L2Q9UI95 211 aa15.19■□□□□ 0.02
CLCN6-205ENST00000376492 NOP56O00567 594 aaKnown RBP15.18■□□□□ 0.02
CLCN6-205ENST00000376492 CAND2O75155 1236 aa15.18■□□□□ 0.02
CLCN6-205ENST00000376492 TGFB3P10600 412 aa15.18■□□□□ 0.02
CLCN6-205ENST00000376492 IRS1P35568 1242 aa15.18■□□□□ 0.02
CLCN6-205ENST00000376492 DLX2Q07687 328 aaPredicted RBP15.18■□□□□ 0.02
CLCN6-205ENST00000376492 IMMTQ16891 758 aaKnown RBP15.18■□□□□ 0.02
CLCN6-205ENST00000376492 HFE2Q6ZVN8 426 aa15.18■□□□□ 0.02
CLCN6-205ENST00000376492 MAP3K20Q9NYL2 800 aaKnown RBP15.18■□□□□ 0.02
CLCN6-205ENST00000376492 PRKAG3Q9UGI9 489 aa15.18■□□□□ 0.02
CLCN6-205ENST00000376492 C5orf42Q9H799 3197 aa15.18■□□□□ 0.02
CLCN6-205ENST00000376492 GCOM1H8Y6P7 765 aaPredicted RBP15.17■□□□□ 0.02
CLCN6-205ENST00000376492 GRM6O15303 877 aa15.17■□□□□ 0.02
CLCN6-205ENST00000376492 POLR2MP0CAP2 368 aa15.17■□□□□ 0.02
CLCN6-205ENST00000376492 GTF2F1P35269 517 aaKnown RBP eCLIP15.17■□□□□ 0.02
CLCN6-205ENST00000376492 MRPS9P82933 396 aaKnown RBP15.17■□□□□ 0.02
CLCN6-205ENST00000376492 PTH1RQ03431 593 aa15.17■□□□□ 0.02
CLCN6-205ENST00000376492 HYAL1Q12794 435 aa15.17■□□□□ 0.02
CLCN6-205ENST00000376492 SEMA3FQ13275 785 aa15.17■□□□□ 0.02
CLCN6-205ENST00000376492 SEC23AQ15436 765 aa15.17■□□□□ 0.02
CLCN6-205ENST00000376492 METTL7BQ6UX53 244 aa15.17■□□□□ 0.02
CLCN6-205ENST00000376492 CYB5R4Q7L1T6 521 aa15.17■□□□□ 0.02
CLCN6-205ENST00000376492 CYFIP1Q7L576 1253 aa15.17■□□□□ 0.02
CLCN6-205ENST00000376492 LMBR1Q8WVP7 490 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms