RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 CD320Q9NPF0 282 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 FAM50BQ9Y247 325 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 THPOP40225 353 aa12.23□□□□□ -0.45
RFC4-201ENST00000296273 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
RFC4-201ENST00000296273 IMMTQ16891 758 aaKnown RBP12.23□□□□□ -0.45
RFC4-201ENST00000296273 HSDL1Q3SXM5 330 aa12.23□□□□□ -0.45
RFC4-201ENST00000296273 PTCRAQ6ISU1 281 aaPredicted RBP12.23□□□□□ -0.45
RFC4-201ENST00000296273 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.23□□□□□ -0.453e-11■□□□□ 10.5
RFC4-201ENST00000296273 VSIG10LQ86VR7 867 aa12.23□□□□□ -0.45
RFC4-201ENST00000296273 ENAHQ8N8S7 591 aaPredicted RBP12.23□□□□□ -0.45
RFC4-201ENST00000296273 WNT8BQ93098 351 aa12.23□□□□□ -0.45
RFC4-201ENST00000296273 C17orf80Q9BSJ5 609 aa12.23□□□□□ -0.45
RFC4-201ENST00000296273 USP26Q9BXU7 913 aa12.23□□□□□ -0.45
RFC4-201ENST00000296273 KRT23Q9C075 422 aa12.23□□□□□ -0.45
RFC4-201ENST00000296273 CNNM2Q9H8M5 875 aa12.23□□□□□ -0.45
RFC4-201ENST00000296273 VAT1LQ9HCJ6 419 aa12.23□□□□□ -0.45
RFC4-201ENST00000296273 C17orf102A2RUQ5 167 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 FAM86C2PA6NEL3 165 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 GRXCR2A6NFK2 248 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 B4E1Z4 1266 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 H3BNC9 293 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 H3BRB1 525 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 ZBTB5O15062 677 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 GGPS1O95749 300 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 MYCLP12524 364 aaPredicted RBP12.22□□□□□ -0.45
RFC4-201ENST00000296273 IL9P15248 144 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 SSTR3P32745 418 aaPredicted RBP12.22□□□□□ -0.45
RFC4-201ENST00000296273 ANAPC15P60006 121 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 ZNF200P98182 395 aaPredicted RBP12.22□□□□□ -0.45
RFC4-201ENST00000296273 PGM5Q15124 567 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 EPC2Q52LR7 807 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 NEK9Q8TD19 979 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 SEPT8Q92599 483 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 APBB2Q92870 758 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 ATP6V0A1Q93050 837 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 TOP1MTQ969P6 601 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 YME1L1Q96TA2 773 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 UBAC1Q9BSL1 405 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 C16orf70Q9BSU1 422 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 DSCC1Q9BVC3 393 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 TUT1Q9H6E5 874 aaKnown RBP12.22□□□□□ -0.45
RFC4-201ENST00000296273 MLXIPQ9HAP2 919 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 ZSWIM5Q9P217 1185 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 COL4A6Q14031 1691 aa12.22□□□□□ -0.45
RFC4-201ENST00000296273 HIP1O00291 1037 aa12.21□□□□□ -0.45
RFC4-201ENST00000296273 OPLAHO14841 1288 aa12.21□□□□□ -0.45
RFC4-201ENST00000296273 RGS20O76081 388 aa12.21□□□□□ -0.45
RFC4-201ENST00000296273 GNAT1P11488 350 aa12.21□□□□□ -0.45
RFC4-201ENST00000296273 UBA1P22314 1058 aaKnown RBP12.21□□□□□ -0.45
RFC4-201ENST00000296273 CCND2P30279 289 aa12.21□□□□□ -0.45
RFC4-201ENST00000296273 HOXC8P31273 242 aa12.21□□□□□ -0.45
RFC4-201ENST00000296273 IFIT1BQ5T764 474 aaKnown RBP12.21□□□□□ -0.45
RFC4-201ENST00000296273 BANK1Q8NDB2 785 aa12.21□□□□□ -0.45
RFC4-201ENST00000296273 RUFY2Q8WXA3 655 aa12.21□□□□□ -0.45
RFC4-201ENST00000296273 PABPC5Q96DU9 382 aaKnown RBP12.21□□□□□ -0.45
RFC4-201ENST00000296273 MTMR8Q96EF0 704 aa12.21□□□□□ -0.45
RFC4-201ENST00000296273 PRKAG3Q9UGI9 489 aa12.21□□□□□ -0.45
RFC4-201ENST00000296273 CIZ1Q9ULV3 898 aaPredicted RBP12.21□□□□□ -0.45
RFC4-201ENST00000296273 PCDHA1Q9Y5I3 950 aa12.21□□□□□ -0.45
RFC4-201ENST00000296273 LAMA4Q16363 1823 aa12.21□□□□□ -0.45
RFC4-201ENST00000296273 KLRF2D3W0D1 207 aa12.2□□□□□ -0.46
RFC4-201ENST00000296273 NCK2O43639 380 aa12.2□□□□□ -0.46
RFC4-201ENST00000296273 STAM2O75886 525 aa12.2□□□□□ -0.46
RFC4-201ENST00000296273 MCM2P49736 904 aa12.2□□□□□ -0.46
RFC4-201ENST00000296273 GPM6BQ13491 265 aa12.2□□□□□ -0.46
RFC4-201ENST00000296273 HIC1Q14526 733 aa12.2□□□□□ -0.46
RFC4-201ENST00000296273 CSPP1Q1MSJ5 1256 aa12.2□□□□□ -0.46
RFC4-201ENST00000296273 GNPTABQ3T906 1256 aa12.2□□□□□ -0.46
RFC4-201ENST00000296273 CWC27Q6UX04 472 aaKnown RBP12.2□□□□□ -0.46
RFC4-201ENST00000296273 STAG2Q8N3U4 1231 aa12.2□□□□□ -0.46
RFC4-201ENST00000296273 IL17RAQ96F46 866 aa12.2□□□□□ -0.46
RFC4-201ENST00000296273 KCNH6Q9H252 994 aa12.2□□□□□ -0.46
RFC4-201ENST00000296273 RNPEPQ9H4A4 650 aa12.2□□□□□ -0.46
RFC4-201ENST00000296273 NSUN3Q9H649 340 aaKnown RBP12.2□□□□□ -0.46
RFC4-201ENST00000296273 DIAPH3Q9NSV4 1193 aa12.2□□□□□ -0.46
RFC4-201ENST00000296273 GCOM1H8Y6P7 765 aaPredicted RBP12.19□□□□□ -0.46
RFC4-201ENST00000296273 NOP56O00567 594 aaKnown RBP12.19□□□□□ -0.46
RFC4-201ENST00000296273 DCXO43602 365 aa12.19□□□□□ -0.46
RFC4-201ENST00000296273 LGALS2P05162 132 aa12.19□□□□□ -0.46
RFC4-201ENST00000296273 POLR2MP0CAP2 368 aa12.19□□□□□ -0.46
RFC4-201ENST00000296273 SMIM10L2AP0DMW4 78 aa12.19□□□□□ -0.46
RFC4-201ENST00000296273 SMIM10L2BP0DMW5 78 aa12.19□□□□□ -0.46
RFC4-201ENST00000296273 SP2Q02086 613 aa12.19□□□□□ -0.46
RFC4-201ENST00000296273 NEDD9Q14511 834 aa12.19□□□□□ -0.46
RFC4-201ENST00000296273 COL19A1Q14993 1142 aa12.19□□□□□ -0.46
RFC4-201ENST00000296273 TMEM192Q8IY95 271 aa12.19□□□□□ -0.46
RFC4-201ENST00000296273 CHMP5Q9NZZ3 219 aa12.19□□□□□ -0.46
RFC4-201ENST00000296273 RWDD3Q9Y3V2 267 aa12.19□□□□□ -0.46
RFC4-201ENST00000296273 MYH6P13533 1939 aa12.19□□□□□ -0.46
RFC4-201ENST00000296273 MICAL3Q7RTP6 2002 aa12.19□□□□□ -0.46
RFC4-201ENST00000296273 PALM3A6NDB9 673 aaPredicted RBP12.18□□□□□ -0.46
RFC4-201ENST00000296273 TREHO43280 583 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 ST18O60284 1047 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 UPP2O95045 317 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 RB1P06400 928 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 CHMLP26374 656 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 HOXA13P31271 388 aaPredicted RBP12.18□□□□□ -0.46
RFC4-201ENST00000296273 ICAM3P32942 547 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 METTL7BQ6UX53 244 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 ESYT1Q9BSJ8 1104 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms