RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 LDB17Q12342 491 aa2.45□□□□□ -2.02
snR43snR43 QCR6P00127 147 aa2.44□□□□□ -2.02
snR43snR43 HMG1P12683 1054 aa2.44□□□□□ -2.02
snR43snR43 PEP5P12868 1029 aa2.44□□□□□ -2.02
snR43snR43 PHO3P24031 467 aa2.44□□□□□ -2.02
snR43snR43 CLB1P24868 471 aa2.44□□□□□ -2.02
snR43snR43 RAD57P25301 460 aa2.44□□□□□ -2.02
snR43snR43 YCR099CP25657 155 aa2.44□□□□□ -2.02
snR43snR43 ADE1P27616 306 aa2.44□□□□□ -2.02
snR43snR43 ATO2P32907 282 aa2.44□□□□□ -2.02
snR43snR43 CNS1P33313 385 aa2.44□□□□□ -2.02
snR43snR43 STO1P34160 861 aaKnown RBP2.44□□□□□ -2.02
snR43snR43 KES1P35844 434 aaKnown RBP2.44□□□□□ -2.02
snR43snR43 RPS27AP35997 82 aaKnown RBP2.44□□□□□ -2.02
snR43snR43 RRP14P36080 434 aaKnown RBP2.44□□□□□ -2.02
snR43snR43 PCH2P38126 564 aa2.44□□□□□ -2.02
snR43snR43 EHT1P38295 451 aa2.44□□□□□ -2.02
snR43snR43 RPS27BP38711 82 aa2.44□□□□□ -2.02
snR43snR43 RPP1P38786 293 aa2.44□□□□□ -2.02
snR43snR43 MNL1P38888 796 aa2.44□□□□□ -2.02
snR43snR43 GGC1P38988 300 aa2.44□□□□□ -2.02
snR43snR43 UTP18P40362 594 aaPredicted RBP2.44□□□□□ -2.02
snR43snR43 MNT3P40549 630 aa2.44□□□□□ -2.02
snR43snR43 CUP9P41817 306 aa2.44□□□□□ -2.02
snR43snR43 ATG36P46983 293 aa2.44□□□□□ -2.02
snR43snR43 YJR142WP47173 342 aa2.44□□□□□ -2.02
snR43snR43 MTR3P48240 250 aaPredicted RBP2.44□□□□□ -2.02
snR43snR43 ERG26P53199 349 aaKnown RBP2.44□□□□□ -2.02
snR43snR43 YGR015CP53208 328 aa2.44□□□□□ -2.02
snR43snR43 HOL1P53389 586 aa2.44□□□□□ -2.02
snR43snR43 BSC5P53755 489 aa2.44□□□□□ -2.02
snR43snR43 ASI2P53895 289 aa2.44□□□□□ -2.02
snR43snR43 SNP1Q00916 300 aaPredicted RBP2.44□□□□□ -2.02
snR43snR43 MTG1Q03151 367 aaPredicted RBP2.44□□□□□ -2.02
snR43snR43 RPN9Q04062 393 aaKnown RBP2.44□□□□□ -2.02
snR43snR43 ROY1Q04847 553 aa2.44□□□□□ -2.02
snR43snR43 YMR034CQ05131 434 aaPredicted RBP2.44□□□□□ -2.02
snR43snR43 YPS7Q06325 596 aa2.44□□□□□ -2.02
snR43snR43 YLR040CQ07988 224 aa2.44□□□□□ -2.02
snR43snR43 YOR114WQ12219 294 aa2.44□□□□□ -2.02
snR43snR43 TPO4Q12256 659 aa2.44□□□□□ -2.02
snR43snR43 PHO2P07269 559 aa2.43□□□□□ -2.02
snR43snR43 CDC24P11433 854 aaPredicted RBP2.43□□□□□ -2.02
snR43snR43 YCL068CP25593 260 aa2.43□□□□□ -2.02
snR43snR43 PCL2P25693 308 aa2.43□□□□□ -2.02
snR43snR43 TPS2P31688 896 aaKnown RBP2.43□□□□□ -2.02
snR43snR43 DCG1P32460 244 aa2.43□□□□□ -2.02
snR43snR43 SRB4P32569 687 aa2.43□□□□□ -2.02
snR43snR43 PEX5P35056 612 aa2.43□□□□□ -2.02
snR43snR43 RRP1P35178 278 aaPredicted RBP2.43□□□□□ -2.02
snR43snR43 KKQ8P36004 724 aa2.43□□□□□ -2.02
snR43snR43 YBR139WP38109 508 aa2.43□□□□□ -2.02
snR43snR43 TCD1P38756 429 aa2.43□□□□□ -2.02
snR43snR43 SAP1P39955 897 aaKnown RBP2.43□□□□□ -2.02
snR43snR43 YEL020CP39994 560 aa2.43□□□□□ -2.02
snR43snR43 VRG4P40107 337 aa2.43□□□□□ -2.02
snR43snR43 YMR134WP40207 237 aa2.43□□□□□ -2.02
snR43snR43 NDE1P40215 560 aa2.43□□□□□ -2.02
snR43snR43 CAF16P43569 289 aa2.43□□□□□ -2.02
snR43snR43 BNA3P47039 444 aaKnown RBP2.43□□□□□ -2.02
snR43snR43 HOC1P47124 396 aa2.43□□□□□ -2.02
snR43snR43 YJR149WP47177 404 aa2.43□□□□□ -2.02
snR43snR43 MPS1P54199 764 aa2.43□□□□□ -2.02
snR43snR43 UGO1Q03327 502 aa2.43□□□□□ -2.02
snR43snR43 YDR209CQ03480 137 aa2.43□□□□□ -2.02
snR43snR43 NUP53Q03790 475 aa2.43□□□□□ -2.02
snR43snR43 SOV1Q04748 898 aa2.43□□□□□ -2.02
snR43snR43 ENT4Q07872 247 aa2.43□□□□□ -2.02
snR43snR43 NUS1Q12063 375 aa2.43□□□□□ -2.02
snR43snR43 ATG29Q12092 213 aa2.43□□□□□ -2.02
snR43snR43 YLR049CQ12110 428 aa2.43□□□□□ -2.02
snR43snR43 PST1Q12355 444 aa2.43□□□□□ -2.02
snR43snR43 NOP14Q99207 810 aaKnown RBP2.43□□□□□ -2.02
snR43snR43 SEC16P48415 2195 aaKnown RBP2.43□□□□□ -2.02
snR43snR43 STT4P37297 1900 aa2.42□□□□□ -2.02
snR43snR43 STE2D6VTK4 431 aa2.42□□□□□ -2.02
snR43snR43 YLR415CO13578 112 aa2.42□□□□□ -2.02
snR43snR43 TEF1P02994 458 aaKnown RBP2.42□□□□□ -2.02
snR43snR43 RPP2AP05319 106 aaKnown RBP2.42□□□□□ -2.02
snR43snR43 ERG20P08524 352 aaKnown RBP2.42□□□□□ -2.02
snR43snR43 NSP1P14907 823 aaKnown RBP2.42□□□□□ -2.02
snR43snR43 HSP26P15992 214 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
snR43snR43 ATP12P22135 325 aa2.42□□□□□ -2.02
snR43snR43 CHA1P25379 360 aaKnown RBP2.42□□□□□ -2.02
snR43snR43 MXR2P25566 168 aa2.42□□□□□ -2.02
snR43snR43 YMC1P32331 307 aa2.42□□□□□ -2.02
snR43snR43 KRE6P32486 720 aa2.42□□□□□ -2.02
snR43snR43 BEM3P32873 1128 aa2.42□□□□□ -2.02
snR43snR43 MRPL10P36520 322 aa2.42□□□□□ -2.02
snR43snR43 RRN10P38204 145 aa2.42□□□□□ -2.02
snR43snR43 YBR062CP38239 180 aa2.42□□□□□ -2.02
snR43snR43 INM1P38710 295 aa2.42□□□□□ -2.02
snR43snR43 YHI9P38765 294 aa2.42□□□□□ -2.02
snR43snR43 YEL057CP39983 233 aa2.42□□□□□ -2.02
snR43snR43 HAT2P39984 401 aa2.42□□□□□ -2.02
snR43snR43 SCC4P40090 624 aa2.42□□□□□ -2.02
snR43snR43 EFM4P40516 257 aa2.42□□□□□ -2.02
snR43snR43 BAP3P41815 604 aa2.42□□□□□ -2.02
snR43snR43 YFL012WP43580 148 aa2.42□□□□□ -2.02
snR43snR43 MUP1P50276 574 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms