RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C MKT1P40850 830 aaKnown RBP3.28□□□□□ -1.88
CUP9YPL177C RPS0BP46654 252 aaKnown RBP3.28□□□□□ -1.88
CUP9YPL177C YIP1P53039 248 aa3.28□□□□□ -1.88
CUP9YPL177C YGL138CP53122 345 aa3.28□□□□□ -1.88
CUP9YPL177C MSO1P53604 210 aaKnown RBP3.28□□□□□ -1.88
CUP9YPL177C ODC1Q03028 310 aa3.28□□□□□ -1.88
CUP9YPL177C YDR131CQ03899 556 aa3.28□□□□□ -1.88
CUP9YPL177C RRP45Q05636 305 aaKnown RBP3.28□□□□□ -1.88
CUP9YPL177C HNT3Q08702 217 aa3.28□□□□□ -1.88
CUP9YPL177C AFI1Q99222 893 aa3.28□□□□□ -1.88
CUP9YPL177C LPD1P09624 499 aaKnown RBP3.27□□□□□ -1.89
CUP9YPL177C PDX1P16451 410 aa3.27□□□□□ -1.89
CUP9YPL177C CLC1P17891 233 aa3.27□□□□□ -1.89
CUP9YPL177C REC107P21651 314 aa3.27□□□□□ -1.89
CUP9YPL177C ADK2P26364 225 aa3.27□□□□□ -1.89
CUP9YPL177C BEM1P29366 551 aa3.27□□□□□ -1.89
CUP9YPL177C SIN4P32259 974 aa3.27□□□□□ -1.89
CUP9YPL177C ECM25P32525 599 aa3.27□□□□□ -1.89
CUP9YPL177C MRP4P32902 394 aa3.27□□□□□ -1.89
CUP9YPL177C NTC20P38302 140 aaPredicted RBP3.27□□□□□ -1.89
CUP9YPL177C RFC3P38629 340 aa3.27□□□□□ -1.89
CUP9YPL177C YJL132WP47014 750 aa3.27□□□□□ -1.89
CUP9YPL177C CAF40P53829 373 aa3.27□□□□□ -1.89
CUP9YPL177C BOR1P53838 576 aa3.27□□□□□ -1.89
CUP9YPL177C MDM30Q05930 598 aa3.27□□□□□ -1.89
CUP9YPL177C THP3Q12049 470 aaKnown RBP3.27□□□□□ -1.89
CUP9YPL177C YLL056CQ12177 298 aa3.27□□□□□ -1.89
CUP9YPL177C VAM3Q12241 283 aa3.27□□□□□ -1.89
CUP9YPL177C REV1P12689 985 aa3.26□□□□□ -1.89
CUP9YPL177C PMR1P13586 950 aa3.26□□□□□ -1.89
CUP9YPL177C SRV2P17555 526 aaKnown RBP3.26□□□□□ -1.89
CUP9YPL177C ERV1P27882 189 aa3.26□□□□□ -1.89
CUP9YPL177C CRM1P30822 1084 aaKnown RBP3.26□□□□□ -1.89
CUP9YPL177C NAT2P37293 288 aa3.26□□□□□ -1.89
CUP9YPL177C COS5P47187 383 aa3.26□□□□□ -1.89
CUP9YPL177C GOR1P53839 350 aa3.26□□□□□ -1.89
CUP9YPL177C KAP120Q02932 1032 aa3.26□□□□□ -1.89
CUP9YPL177C COS7Q07788 383 aa3.26□□□□□ -1.89
CUP9YPL177C YPL199CQ08954 240 aa3.26□□□□□ -1.89
CUP9YPL177C YPR022CQ12139 1133 aa3.26□□□□□ -1.89
CUP9YPL177C YER078W-AQ3E7A2 54 aa3.26□□□□□ -1.89
CUP9YPL177C RHB1P25378 209 aa3.25□□□□□ -1.89
CUP9YPL177C KRE2P27809 442 aa3.25□□□□□ -1.89
CUP9YPL177C URA7P28274 579 aaKnown RBP3.25□□□□□ -1.89
CUP9YPL177C ITR1P30605 584 aa3.25□□□□□ -1.89
CUP9YPL177C HIR2P32480 875 aa3.25□□□□□ -1.89
CUP9YPL177C YHR054CP38780 354 aa3.25□□□□□ -1.89
CUP9YPL177C FAA2P39518 744 aa3.25□□□□□ -1.89
CUP9YPL177C YIL067CP40514 678 aa3.25□□□□□ -1.89
CUP9YPL177C OST1P41543 476 aaKnown RBP3.25□□□□□ -1.89
CUP9YPL177C FRE4P53746 719 aa3.25□□□□□ -1.89
CUP9YPL177C ERB1Q04660 807 aaKnown RBP3.25□□□□□ -1.89
CUP9YPL177C YLR345WQ06137 509 aa3.25□□□□□ -1.89
CUP9YPL177C HIS4P00815 799 aaKnown RBP3.24□□□□□ -1.89
CUP9YPL177C HEM15P16622 393 aa3.24□□□□□ -1.89
CUP9YPL177C GEX1P25596 615 aa3.24□□□□□ -1.89
CUP9YPL177C AVT5P38176 459 aa3.24□□□□□ -1.89
CUP9YPL177C YFL067WP43537 175 aa3.24□□□□□ -1.89
CUP9YPL177C YJR011CP47086 261 aaPredicted RBP3.24□□□□□ -1.89
CUP9YPL177C ECM27P47144 725 aa3.24□□□□□ -1.89
CUP9YPL177C SKO1Q02100 647 aa3.24□□□□□ -1.89
CUP9YPL177C DON1Q05610 365 aa3.24□□□□□ -1.89
CUP9YPL177C MUM3Q08750 479 aa3.24□□□□□ -1.89
CUP9YPL177C CBS2P14905 389 aa3.23□□□□□ -1.89
CUP9YPL177C URA4P20051 364 aa3.23□□□□□ -1.89
CUP9YPL177C TIP1P27654 210 aaPredicted RBP3.23□□□□□ -1.89
CUP9YPL177C TFB1P32776 642 aa3.23□□□□□ -1.89
CUP9YPL177C SOR1P35497 357 aaKnown RBP3.23□□□□□ -1.89
CUP9YPL177C YBP1P38315 674 aa3.23□□□□□ -1.89
CUP9YPL177C MST28P39552 234 aa3.23□□□□□ -1.89
CUP9YPL177C HMS2P47175 358 aa3.23□□□□□ -1.89
CUP9YPL177C MRP51Q02950 344 aa3.23□□□□□ -1.89
CUP9YPL177C SOR2Q07786 357 aa3.23□□□□□ -1.89
CUP9YPL177C DIS3Q08162 1001 aaKnown RBP3.23□□□□□ -1.89
CUP9YPL177C TY1B-AO13527 1196 aaKnown RBP3.22□□□□□ -1.89
CUP9YPL177C ILV5P06168 395 aaKnown RBP3.22□□□□□ -1.89
CUP9YPL177C CLB1P24868 471 aa3.22□□□□□ -1.89
CUP9YPL177C DBF4P32325 704 aa3.22□□□□□ -1.89
CUP9YPL177C PIM1P36775 1133 aa3.22□□□□□ -1.89
CUP9YPL177C RIB5P38145 238 aa3.22□□□□□ -1.89
CUP9YPL177C LYS1P38998 373 aaRIP-Chip data3.22□□□□□ -1.89not detected
CUP9YPL177C ZIM17P42844 174 aa3.22□□□□□ -1.89
CUP9YPL177C LAM5P43560 674 aa3.22□□□□□ -1.89
CUP9YPL177C RMT2Q03305 412 aa3.22□□□□□ -1.89
CUP9YPL177C AIM32Q04689 311 aa3.22□□□□□ -1.89
CUP9YPL177C TIM18Q08749 192 aa3.22□□□□□ -1.89
CUP9YPL177C RKM1Q08961 583 aaPredicted RBP3.22□□□□□ -1.89
CUP9YPL177C PKH2Q12236 1081 aaKnown RBP3.22□□□□□ -1.89
CUP9YPL177C HSP42Q12329 375 aa3.22□□□□□ -1.89
CUP9YPL177C ORT1Q12375 292 aa3.22□□□□□ -1.89
CUP9YPL177C SLY1P22213 666 aa3.21□□□□□ -1.9
CUP9YPL177C BRF1P29056 596 aa3.21□□□□□ -1.9
CUP9YPL177C MIX23P38162 196 aa3.21□□□□□ -1.9
CUP9YPL177C RFS1P38234 210 aaKnown RBP3.21□□□□□ -1.9
CUP9YPL177C MMS4P38257 691 aa3.21□□□□□ -1.9
CUP9YPL177C RRT2P38332 387 aa3.21□□□□□ -1.9
CUP9YPL177C TCB2P48231 1178 aa3.21□□□□□ -1.9
CUP9YPL177C PHB2P50085 310 aa3.21□□□□□ -1.9
CUP9YPL177C HXT11P54862 567 aa3.21□□□□□ -1.9
CUP9YPL177C ACL4Q03771 387 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms