RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C UBX6P47049 396 aa4.03□□□□□ -1.76
SNF8YPL002C YGL260WP53056 76 aa4.03□□□□□ -1.76
SNF8YPL002C YGR016WP53209 190 aa4.03□□□□□ -1.76
SNF8YPL002C YMR160WQ03823 816 aa4.03□□□□□ -1.76
SNF8YPL002C EMI1Q04406 187 aa4.03□□□□□ -1.76
SNF8YPL002C YLR352WQ06479 807 aa4.03□□□□□ -1.76
SNF8YPL002C FMP45Q07651 309 aa4.03□□□□□ -1.76
SNF8YPL002C LDB18Q07887 179 aa4.03□□□□□ -1.76
SNF8YPL002C CMS1Q07897 291 aaKnown RBP4.03□□□□□ -1.76
SNF8YPL002C YOR378WQ08902 515 aa4.03□□□□□ -1.76
SNF8YPL002C YTM1Q12024 460 aaPredicted RBP4.03□□□□□ -1.76
SNF8YPL002C TMS1Q12116 473 aa4.03□□□□□ -1.76
SNF8YPL002C GPM3Q12326 303 aa4.03□□□□□ -1.76
SNF8YPL002C BI3Q9ZZW7 517 aa4.03□□□□□ -1.76
SNF8YPL002C CDC31P06704 161 aaKnown RBP4.02□□□□□ -1.77
SNF8YPL002C CPA1P07258 411 aaKnown RBP4.02□□□□□ -1.77
SNF8YPL002C GPA1P08539 472 aa4.02□□□□□ -1.77
SNF8YPL002C APA1P16550 321 aaKnown RBP4.02□□□□□ -1.77
SNF8YPL002C PLC1P32383 869 aa4.02□□□□□ -1.77
SNF8YPL002C SPS19P32573 292 aaKnown RBP4.02□□□□□ -1.77
SNF8YPL002C CDC13P32797 924 aaKnown RBP4.02□□□□□ -1.77
SNF8YPL002C MRS6P32864 603 aaKnown RBP4.02□□□□□ -1.77
SNF8YPL002C ALY1P36117 915 aa4.02□□□□□ -1.77
SNF8YPL002C SPT8P38915 602 aa4.02□□□□□ -1.77
SNF8YPL002C BFR1P38934 470 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
SNF8YPL002C YEN1P40028 759 aa4.02□□□□□ -1.77
SNF8YPL002C SSU1P41930 458 aa4.02□□□□□ -1.77
SNF8YPL002C SPG5P42933 373 aa4.02□□□□□ -1.77
SNF8YPL002C PEX8P53248 589 aa4.02□□□□□ -1.77
SNF8YPL002C VPS9P54787 451 aa4.02□□□□□ -1.77
SNF8YPL002C ARX1Q03862 593 aaKnown RBP4.02□□□□□ -1.77
SNF8YPL002C SPC19Q03954 165 aa4.02□□□□□ -1.77
SNF8YPL002C ERV41Q04651 352 aa4.02□□□□□ -1.77
SNF8YPL002C CIA1Q05583 330 aa4.02□□□□□ -1.77
SNF8YPL002C GGA1Q06336 557 aa4.02□□□□□ -1.77
SNF8YPL002C TPO3Q06451 622 aa4.02□□□□□ -1.77
SNF8YPL002C YPL191CQ08930 360 aa4.02□□□□□ -1.77
SNF8YPL002C AAC1P04710 309 aa4.01□□□□□ -1.77
SNF8YPL002C ATP4P05626 244 aa4.01□□□□□ -1.77
SNF8YPL002C BCY1P07278 416 aaKnown RBP4.01□□□□□ -1.77
SNF8YPL002C ILS1P09436 1072 aaKnown RBP4.01□□□□□ -1.77
SNF8YPL002C PET123P17558 318 aa4.01□□□□□ -1.77
SNF8YPL002C CLC1P17891 233 aa4.01□□□□□ -1.77
SNF8YPL002C SEC62P21825 274 aa4.01□□□□□ -1.77
SNF8YPL002C TRX1P22217 103 aaKnown RBP4.01□□□□□ -1.77
SNF8YPL002C AAT2P23542 418 aaKnown RBP4.01□□□□□ -1.77
SNF8YPL002C PHO84P25297 587 aaKnown RBP4.01□□□□□ -1.77
SNF8YPL002C YCL042WP25572 119 aa4.01□□□□□ -1.77
SNF8YPL002C MIA40P36046 403 aa4.01□□□□□ -1.77
SNF8YPL002C NTR2P36118 322 aaPredicted RBP4.01□□□□□ -1.77
SNF8YPL002C IML3P38265 245 aa4.01□□□□□ -1.77
SNF8YPL002C DED81P38707 554 aaKnown RBP4.01□□□□□ -1.77
SNF8YPL002C LYS1P38998 373 aaRIP-Chip data4.01□□□□□ -1.77not detected
SNF8YPL002C TIM17P39515 158 aa4.01□□□□□ -1.77
SNF8YPL002C IST3P40565 148 aaPredicted RBP4.01□□□□□ -1.77
SNF8YPL002C IKS1P47042 667 aa4.01□□□□□ -1.77
SNF8YPL002C GPG1P53130 126 aa4.01□□□□□ -1.77
SNF8YPL002C YGR127WP53275 312 aa4.01□□□□□ -1.77
SNF8YPL002C HOL1P53389 586 aa4.01□□□□□ -1.77
SNF8YPL002C DSL1P53847 754 aa4.01□□□□□ -1.77
SNF8YPL002C YNL040WP53960 456 aaPredicted RBP4.01□□□□□ -1.77
SNF8YPL002C CDC14Q00684 551 aa4.01□□□□□ -1.77
SNF8YPL002C CCE1Q03702 353 aa4.01□□□□□ -1.77
SNF8YPL002C ENT5Q03769 411 aaKnown RBP4.01□□□□□ -1.77
SNF8YPL002C PSR1Q07800 427 aa4.01□□□□□ -1.77
SNF8YPL002C YLR030WQ07967 263 aa4.01□□□□□ -1.77
SNF8YPL002C AAD15Q08361 143 aa4.01□□□□□ -1.77
SNF8YPL002C HER1Q12276 1246 aa4.01□□□□□ -1.77
SNF8YPL002C RRP12Q12754 1228 aaKnown RBP4.01□□□□□ -1.77
SNF8YPL002C SEM1O94742 89 aa4□□□□□ -1.77
SNF8YPL002C YER190C-BP0CX94 160 aa4□□□□□ -1.77
SNF8YPL002C YEL077W-AP0CX95 160 aa4□□□□□ -1.77
SNF8YPL002C YGR296C-BP0CX96 160 aa4□□□□□ -1.77
SNF8YPL002C YPL283W-BP0CX97 160 aa4□□□□□ -1.77
SNF8YPL002C YPR204C-AP0CX98 160 aa4□□□□□ -1.77
SNF8YPL002C HOM3P10869 527 aa4□□□□□ -1.77
SNF8YPL002C EST1P17214 699 aaPredicted RBP4□□□□□ -1.77
SNF8YPL002C DCC1P25559 380 aa4□□□□□ -1.77
SNF8YPL002C RFA2P26754 273 aaKnown RBP4□□□□□ -1.77
SNF8YPL002C DGR2P32330 852 aa4□□□□□ -1.77
SNF8YPL002C GDA1P32621 518 aa4□□□□□ -1.77
SNF8YPL002C LTV1P34078 463 aa4□□□□□ -1.77
SNF8YPL002C YET1P35723 206 aa4□□□□□ -1.77
SNF8YPL002C CYC2P38909 366 aa4□□□□□ -1.77
SNF8YPL002C SWD1P39706 426 aa4□□□□□ -1.77
SNF8YPL002C YIL024CP40543 189 aa4□□□□□ -1.77
SNF8YPL002C YGR111WP53265 400 aa4□□□□□ -1.77
SNF8YPL002C YNL092WP53934 400 aa4□□□□□ -1.77
SNF8YPL002C YPL071CQ02864 156 aa4□□□□□ -1.77
SNF8YPL002C PEX25Q02969 394 aa4□□□□□ -1.77
SNF8YPL002C RRB1Q04225 511 aaKnown RBP4□□□□□ -1.77
SNF8YPL002C RRN11Q04712 507 aa4□□□□□ -1.77
SNF8YPL002C CYK3Q07533 885 aa4□□□□□ -1.77
SNF8YPL002C CWC2Q12046 339 aaPredicted RBP4□□□□□ -1.77
SNF8YPL002C AHA1Q12449 350 aaKnown RBP4□□□□□ -1.77
SNF8YPL002C STT4P37297 1900 aa3.99□□□□□ -1.77
SNF8YPL002C MDM35O60200 86 aa3.99□□□□□ -1.77
SNF8YPL002C COX5AP00424 153 aa3.99□□□□□ -1.77
SNF8YPL002C IMG1P25626 169 aa3.99□□□□□ -1.77
SNF8YPL002C SIN4P32259 974 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms