RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C PMR1P13586 950 aa3.21□□□□□ -1.9
HRD1YOL013C ALG1P16661 449 aa3.21□□□□□ -1.9
HRD1YOL013C MGR1P25573 417 aa3.21□□□□□ -1.9
HRD1YOL013C RAD14P28519 371 aa3.21□□□□□ -1.9
HRD1YOL013C MCM4P30665 933 aaKnown RBP3.21□□□□□ -1.9
HRD1YOL013C DPH5P32469 300 aaPredicted RBP3.21□□□□□ -1.9
HRD1YOL013C ATP3P38077 311 aaKnown RBP3.21□□□□□ -1.9
HRD1YOL013C SPP381P38282 291 aaPredicted RBP3.21□□□□□ -1.9
HRD1YOL013C VBA2P38358 474 aaKnown RBP3.21□□□□□ -1.9
HRD1YOL013C MBB1P39534 108 aa3.21□□□□□ -1.9
HRD1YOL013C YGR127WP53275 312 aa3.21□□□□□ -1.9
HRD1YOL013C MPP6P53725 186 aaPredicted RBP3.21□□□□□ -1.9
HRD1YOL013C YNL050CP53952 270 aa3.21□□□□□ -1.9
HRD1YOL013C STD1Q02794 444 aa3.21□□□□□ -1.9
HRD1YOL013C ATG38Q05789 226 aaKnown RBP3.21□□□□□ -1.9
HRD1YOL013C ADE13Q05911 482 aaKnown RBP3.21□□□□□ -1.9
HRD1YOL013C NDL1Q06568 189 aa3.21□□□□□ -1.9
HRD1YOL013C GEP3Q08622 556 aa3.21□□□□□ -1.9
HRD1YOL013C PKH2Q12236 1081 aaKnown RBP3.21□□□□□ -1.9
HRD1YOL013C RBD2Q12270 262 aa3.21□□□□□ -1.9
HRD1YOL013C RIP1P08067 215 aa3.2□□□□□ -1.9
HRD1YOL013C ERG7P38604 731 aa3.2□□□□□ -1.9
HRD1YOL013C AIM10P39965 576 aaKnown RBP3.2□□□□□ -1.9
HRD1YOL013C LOC1P43586 204 aaPredicted RBP3.2□□□□□ -1.9
HRD1YOL013C RPN11P43588 306 aaKnown RBP3.2□□□□□ -1.9
HRD1YOL013C RIB4P50861 169 aaPredicted RBP3.2□□□□□ -1.9
HRD1YOL013C MND1P53102 219 aa3.2□□□□□ -1.9
HRD1YOL013C YPR003CP53394 754 aa3.2□□□□□ -1.9
HRD1YOL013C RSM23Q01163 450 aa3.2□□□□□ -1.9
HRD1YOL013C PLM2Q04383 521 aa3.2□□□□□ -1.9
HRD1YOL013C HRD3Q05787 833 aa3.2□□□□□ -1.9
HRD1YOL013C YLL007CQ07799 665 aa3.2□□□□□ -1.9
HRD1YOL013C NCE102Q12207 173 aaRIP-Chip data3.2□□□□□ -1.9not detected
HRD1YOL013C RGT2Q12300 763 aa3.2□□□□□ -1.9
HRD1YOL013C ADF1Q2V2Q1 113 aa3.2□□□□□ -1.9
HRD1YOL013C MDS3P53094 1487 aa3.2□□□□□ -1.9
HRD1YOL013C BUD4P47136 1447 aa3.2□□□□□ -1.9
HRD1YOL013C PEP1P32319 1579 aa3.2□□□□□ -1.9
HRD1YOL013C PEP4P07267 405 aaKnown RBP3.2□□□□□ -1.9
HRD1YOL013C SEC63P14906 663 aa3.2□□□□□ -1.9
HRD1YOL013C UGA1P17649 471 aa3.2□□□□□ -1.9
HRD1YOL013C PET18P25362 215 aa3.2□□□□□ -1.9
HRD1YOL013C RHB1P25378 209 aa3.2□□□□□ -1.9
HRD1YOL013C YCL068CP25593 260 aa3.2□□□□□ -1.9
HRD1YOL013C GSY2P27472 705 aa3.2□□□□□ -1.9
HRD1YOL013C KRE2P27809 442 aa3.2□□□□□ -1.9
HRD1YOL013C RME1P32338 300 aaKnown RBP3.2□□□□□ -1.9
HRD1YOL013C ARP1P38696 384 aa3.2□□□□□ -1.9
HRD1YOL013C RRP4P38792 359 aaKnown RBP3.2□□□□□ -1.9
HRD1YOL013C BZZ1P38822 633 aa3.2□□□□□ -1.9
HRD1YOL013C YHR177WP38867 453 aa3.2□□□□□ -1.9
HRD1YOL013C END3P39013 349 aa3.2□□□□□ -1.9
HRD1YOL013C CIN4P39110 191 aa3.2□□□□□ -1.9
HRD1YOL013C YER034WP40022 185 aaKnown RBP3.2□□□□□ -1.9
HRD1YOL013C ALD5P40047 520 aaKnown RBP3.2□□□□□ -1.9
HRD1YOL013C TDA10P42938 290 aa3.2□□□□□ -1.9
HRD1YOL013C SNO3P43544 222 aa3.2□□□□□ -1.9
HRD1YOL013C LIA1P47120 325 aaKnown RBP3.2□□□□□ -1.9
HRD1YOL013C DRN1P53255 507 aaKnown RBP3.2□□□□□ -1.9
HRD1YOL013C RTT102P53330 157 aa3.2□□□□□ -1.9
HRD1YOL013C DBP6P53734 629 aaKnown RBP3.2□□□□□ -1.9
HRD1YOL013C STP1Q00947 519 aa3.2□□□□□ -1.9
HRD1YOL013C RRB1Q04225 511 aaKnown RBP3.2□□□□□ -1.9
HRD1YOL013C EMI2Q04409 500 aaKnown RBP3.2□□□□□ -1.9
HRD1YOL013C IPK1Q06667 281 aa3.2□□□□□ -1.9
HRD1YOL013C ECM30Q06673 1274 aa3.2□□□□□ -1.9
HRD1YOL013C POS5Q06892 414 aa3.2□□□□□ -1.9
HRD1YOL013C YDL057WQ07379 328 aa3.2□□□□□ -1.9
HRD1YOL013C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
HRD1YOL013C YOL107WQ12239 342 aa3.2□□□□□ -1.9
HRD1YOL013C RDL1Q12305 139 aaKnown RBP3.2□□□□□ -1.9
HRD1YOL013C GIS3Q12418 502 aa3.2□□□□□ -1.9
HRD1YOL013C ECM5Q03214 1411 aa3.19□□□□□ -1.9
HRD1YOL013C SEC3P33332 1336 aaKnown RBP3.19□□□□□ -1.9
HRD1YOL013C RTC1Q08281 1341 aa3.19□□□□□ -1.9
HRD1YOL013C YER145C-AA0A023PYF4 145 aa3.19□□□□□ -1.9
HRD1YOL013C SAM1P10659 382 aaKnown RBP3.19□□□□□ -1.9
HRD1YOL013C ATP10P18496 279 aa3.19□□□□□ -1.9
HRD1YOL013C YSC83P32792 385 aa3.19□□□□□ -1.9
HRD1YOL013C MTR2P34232 184 aaKnown RBP3.19□□□□□ -1.9
HRD1YOL013C RRP1P35178 278 aaPredicted RBP3.19□□□□□ -1.9
HRD1YOL013C SWC5P38326 303 aa3.19□□□□□ -1.9
HRD1YOL013C VHC1P38329 1120 aa3.19□□□□□ -1.9
HRD1YOL013C STP2P38704 541 aa3.19□□□□□ -1.9
HRD1YOL013C PHM8P40025 321 aa3.19□□□□□ -1.9
HRD1YOL013C ASN2P49090 572 aaKnown RBP3.19□□□□□ -1.9
HRD1YOL013C BIO3P50277 480 aa3.19□□□□□ -1.9
HRD1YOL013C ERG26P53199 349 aaKnown RBP3.19□□□□□ -1.9
HRD1YOL013C COG2P53271 262 aa3.19□□□□□ -1.9
HRD1YOL013C YNL134CP53912 376 aaKnown RBP3.19□□□□□ -1.9
HRD1YOL013C HEF3P53978 1044 aaKnown RBP3.19□□□□□ -1.9
HRD1YOL013C ERG13P54839 491 aaKnown RBP3.19□□□□□ -1.9
HRD1YOL013C SPO19Q03029 223 aa3.19□□□□□ -1.9
HRD1YOL013C CAB5Q03941 241 aa3.19□□□□□ -1.9
HRD1YOL013C ECM7Q06200 448 aa3.19□□□□□ -1.9
HRD1YOL013C SMD2Q06217 110 aaKnown RBP3.19□□□□□ -1.9
HRD1YOL013C BSP1Q06604 576 aa3.19□□□□□ -1.9
HRD1YOL013C RKM1Q08961 583 aaPredicted RBP3.19□□□□□ -1.9
HRD1YOL013C MED2Q12124 431 aa3.19□□□□□ -1.9
HRD1YOL013C FRE7Q12333 620 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms