RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	FAA4	P47912	694 aa	Known RBP	3.89	□□□□□ -1.79
ATG2	YNL242W	PRP38	Q00723	242 aa	Predicted RBP	3.89	□□□□□ -1.79
ATG2	YNL242W	MFB1	Q04922	465 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	ATG34	Q12292	412 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	BNI1	P41832	1953 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	RAS2	P01120	322 aa	Known RBP	3.89	□□□□□ -1.79
ATG2	YNL242W	YCR090C	P25654	182 aa	Known RBP	3.89	□□□□□ -1.79
ATG2	YNL242W	FRE1	P32791	686 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	STS1	P38637	319 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	DSS1	P39112	969 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	EXO1	P39875	702 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	GTR2	P53290	341 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	TIM13	P53299	105 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	DPB4	Q04603	196 aa	Known RBP	3.89	□□□□□ -1.79
ATG2	YNL242W	CLP1	Q08685	445 aa	Predicted RBP	3.89	□□□□□ -1.79
ATG2	YNL242W	YPR1	Q12458	312 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	YPL247C	Q12523	523 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.89	□□□□□ -1.79	not detected
ATG2	YNL242W	FPS1	P23900	669 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	YUR1	P26725	428 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	ECM25	P32525	599 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	PPQ1	P32945	549 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	ECM27	P47144	725 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	MNP1	P53163	194 aa	Predicted RBP	3.89	□□□□□ -1.79
ATG2	YNL242W	YNR068C	P53754	272 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	CRR1	Q05790	422 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	YPS7	Q06325	596 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	ECM30	Q06673	1274 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	YOR378W	Q08902	515 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	HMS1	Q12398	434 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	ZPS1	Q12512	249 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.89	□□□□□ -1.79	not detected
ATG2	YNL242W	HEM2	P05373	342 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	GLN4	P13188	809 aa	Known RBP	3.89	□□□□□ -1.79
ATG2	YNL242W	ATP12	P22135	325 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	HCM1	P25364	564 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	CWH43	P25618	953 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	MSS51	P32335	436 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	AFR1	P33304	620 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	SHP1	P34223	423 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	LAS21	P40367	830 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	CLD1	P53264	445 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	BUD32	P53323	261 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	SLM2	P53955	656 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	YMR279C	Q03263	540 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	SNX41	Q04053	625 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	PUS5	Q06244	254 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	EAF1	Q06337	982 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	SYC1	Q08553	188 aa	Predicted RBP	3.89	□□□□□ -1.79
ATG2	YNL242W	NBP2	Q12163	236 aa		3.89	□□□□□ -1.79
ATG2	YNL242W	PKH2	Q12236	1081 aa	Known RBP	3.89	□□□□□ -1.79
ATG2	YNL242W	LAT1	P12695	482 aa	Known RBP	3.88	□□□□□ -1.79
ATG2	YNL242W	ARO3	P14843	370 aa	Known RBP	3.88	□□□□□ -1.79
ATG2	YNL242W	KIN82	P25341	720 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	RIM1	P32445	135 aa	Known RBP	3.88	□□□□□ -1.79
ATG2	YNL242W	EFM1	P38732	585 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	VAC8	P39968	578 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	ATM1	P40416	690 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	MNT3	P40549	630 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	LSB6	P42951	607 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	RRT5	P43607	289 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	NUP85	P46673	744 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	BIR1	P47134	954 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	GOR1	P53839	350 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	SPR6	Q01684	191 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	TOF2	Q02208	771 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	PML39	Q03760	334 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	UBX5	Q06682	500 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	NRT1	Q08485	598 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	YOR022C	Q12204	715 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	SNF8	Q12483	233 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	FLP1	P03870	423 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	COX11	P19516	300 aa	Known RBP	3.88	□□□□□ -1.79
ATG2	YNL242W	MIH1	P23748	554 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	DBP2	P24783	546 aa	Known RBP	3.88	□□□□□ -1.79
ATG2	YNL242W	ROT2	P38138	954 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	MMS4	P38257	691 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	PHO88	P38264	188 aa	Predicted RBP	3.88	□□□□□ -1.79
ATG2	YNL242W	PYK2	P52489	506 aa	Known RBP	3.88	□□□□□ -1.79
ATG2	YNL242W	YNL146W	P53906	100 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	EGD1	Q02642	157 aa	Known RBP	3.88	□□□□□ -1.79
ATG2	YNL242W	YPL071C	Q02864	156 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	RCR2	Q03446	210 aa	Known RBP	3.88	□□□□□ -1.79
ATG2	YNL242W	SKI7	Q08491	747 aa	Predicted RBP	3.88	□□□□□ -1.79
ATG2	YNL242W	IES4	Q08561	116 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	YCL001W-B	Q96VH2	84 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	IZH4	Q99393	312 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	TKL1	P23254	680 aa	Known RBP	3.88	□□□□□ -1.79
ATG2	YNL242W	KRR1	P25586	316 aa	Predicted RBP	3.88	□□□□□ -1.79
ATG2	YNL242W	YBR241C	P38142	488 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	LRP1	P38801	184 aa	Known RBP	3.88	□□□□□ -1.79
ATG2	YNL242W	HPA3	P39979	161 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	CAK1	P43568	368 aa	Predicted RBP	3.88	□□□□□ -1.79
ATG2	YNL242W	PFD1	P46988	109 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	REC102	Q02721	264 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	YMD8	Q03697	442 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	LUC7	Q07508	261 aa	Predicted RBP	3.88	□□□□□ -1.79
ATG2	YNL242W	NMD4	Q12129	218 aa		3.88	□□□□□ -1.79
ATG2	YNL242W	RRP12	Q12754	1228 aa	Known RBP	3.88	□□□□□ -1.79
ATG2	YNL242W	DED1	P06634	604 aa	Known RBP	3.87	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms