RNA–Protein interactions for RNA: YMR293C

HER2, Transcript of Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex, yeast

Gene HER2, Length 1,395 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HER2	YMR293C	SCC2	Q04002	1493 aa		4.85	□□□□□ -1.63
HER2	YMR293C	YLR278C	Q05854	1341 aa		4.85	□□□□□ -1.63
HER2	YMR293C	CYB2	P00175	591 aa		4.84	□□□□□ -1.63
HER2	YMR293C	YML002W	P0CF17	737 aa		4.84	□□□□□ -1.63
HER2	YMR293C	ATR1	P13090	542 aa		4.84	□□□□□ -1.63
HER2	YMR293C	FRE2	P36033	711 aa		4.84	□□□□□ -1.63
HER2	YMR293C	PMU1	P36069	295 aa		4.84	□□□□□ -1.63
HER2	YMR293C	YAT2	P40017	923 aa		4.84	□□□□□ -1.63
HER2	YMR293C	ALG8	P40351	577 aa		4.84	□□□□□ -1.63
HER2	YMR293C	GCD10	P41814	478 aa		4.84	□□□□□ -1.63
HER2	YMR293C	YJR011C	P47086	261 aa	Predicted RBP	4.84	□□□□□ -1.63
HER2	YMR293C	RSC1	P53236	928 aa		4.84	□□□□□ -1.63
HER2	YMR293C	RNA14	P25298	677 aa	Known RBP	4.83	□□□□□ -1.64
HER2	YMR293C	TFB1	P32776	642 aa		4.83	□□□□□ -1.64
HER2	YMR293C	PXA2	P34230	853 aa		4.83	□□□□□ -1.64
HER2	YMR293C	RRT2	P38332	387 aa		4.83	□□□□□ -1.64
HER2	YMR293C	RPH1	P39956	796 aa		4.83	□□□□□ -1.64
HER2	YMR293C	ZIM17	P42844	174 aa		4.83	□□□□□ -1.64
HER2	YMR293C	RPS0B	P46654	252 aa	Known RBP	4.83	□□□□□ -1.64
HER2	YMR293C	RPT4	P53549	437 aa	Known RBP	4.83	□□□□□ -1.64
HER2	YMR293C	CRZ1	P53968	678 aa		4.83	□□□□□ -1.64
HER2	YMR293C	ACL4	Q03771	387 aa		4.83	□□□□□ -1.64
HER2	YMR293C	MMR1	Q06324	491 aa		4.83	□□□□□ -1.64
HER2	YMR293C	ESP1	Q03018	1630 aa		4.82	□□□□□ -1.64
HER2	YMR293C	RPL20A	P0CX23	172 aa	Known RBP	4.82	□□□□□ -1.64
HER2	YMR293C	RPL20B	P0CX24	172 aa	Predicted RBP	4.82	□□□□□ -1.64
HER2	YMR293C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
HER2	YMR293C	YUR1	P26725	428 aa		4.82	□□□□□ -1.64
HER2	YMR293C	ECM25	P32525	599 aa		4.82	□□□□□ -1.64
HER2	YMR293C	SLM4	P38247	162 aa		4.82	□□□□□ -1.64
HER2	YMR293C	ISC1	P40015	477 aa	Known RBP	4.82	□□□□□ -1.64
HER2	YMR293C	MEP2	P41948	499 aa		4.82	□□□□□ -1.64
HER2	YMR293C	YFR016C	P43597	1233 aa	Known RBP	4.82	□□□□□ -1.64
HER2	YMR293C	YDL186W	P48568	277 aa		4.82	□□□□□ -1.64
HER2	YMR293C	TOM22	P49334	152 aa		4.82	□□□□□ -1.64
HER2	YMR293C	PNG1	Q02890	363 aa		4.82	□□□□□ -1.64
HER2	YMR293C	SET6	Q12529	373 aa		4.82	□□□□□ -1.64
HER2	YMR293C	CTF3	Q12748	733 aa		4.82	□□□□□ -1.64
HER2	YMR293C	HEM2	P05373	342 aa		4.81	□□□□□ -1.64
HER2	YMR293C	HIP1	P06775	603 aa		4.81	□□□□□ -1.64
HER2	YMR293C	PUT3	P25502	979 aa	Predicted RBP	4.81	□□□□□ -1.64
HER2	YMR293C	BEM1	P29366	551 aa		4.81	□□□□□ -1.64
HER2	YMR293C	LRP1	P38801	184 aa	Known RBP	4.81	□□□□□ -1.64
HER2	YMR293C	MDM31	P38880	579 aa		4.81	□□□□□ -1.64
HER2	YMR293C	RRT5	P43607	289 aa		4.81	□□□□□ -1.64
HER2	YMR293C	ECM27	P47144	725 aa		4.81	□□□□□ -1.64
HER2	YMR293C	ART5	P53244	586 aa	Known RBP	4.81	□□□□□ -1.64
HER2	YMR293C	DSL1	P53847	754 aa		4.81	□□□□□ -1.64
HER2	YMR293C	ODC1	Q03028	310 aa		4.81	□□□□□ -1.64
HER2	YMR293C	HOT1	Q03213	719 aa		4.81	□□□□□ -1.64
HER2	YMR293C	TRM732	Q03496	1420 aa		4.81	□□□□□ -1.64
HER2	YMR293C	URA4	P20051	364 aa		4.8	□□□□□ -1.64
HER2	YMR293C	RHB1	P25378	209 aa		4.8	□□□□□ -1.64
HER2	YMR293C	YCR100C	P25606	316 aa		4.8	□□□□□ -1.64
HER2	YMR293C	RSM22	P36056	628 aa		4.8	□□□□□ -1.64
HER2	YMR293C	CIK1	Q01649	594 aa		4.8	□□□□□ -1.64
HER2	YMR293C	YDR387C	Q04162	555 aa		4.8	□□□□□ -1.64
HER2	YMR293C	YMR230W-A	Q3E7B5	62 aa		4.8	□□□□□ -1.64
HER2	YMR293C	YBR298C-A	Q8TGK4	73 aa		4.8	□□□□□ -1.64
HER2	YMR293C	DNF2	Q12675	1612 aa		4.79	□□□□□ -1.64
HER2	YMR293C	SCEI	P03882	235 aa		4.79	□□□□□ -1.64
HER2	YMR293C	CLN1	P20437	546 aa		4.79	□□□□□ -1.64
HER2	YMR293C	MCK1	P21965	375 aa	Known RBP	4.79	□□□□□ -1.64
HER2	YMR293C	BRF1	P29056	596 aa		4.79	□□□□□ -1.64
HER2	YMR293C	NDI1	P32340	513 aa		4.79	□□□□□ -1.64
HER2	YMR293C	GLC7	P32598	312 aa	Known RBP	4.79	□□□□□ -1.64
HER2	YMR293C	APE3	P37302	537 aa	Known RBP	4.79	□□□□□ -1.64
HER2	YMR293C	YJL213W	P40896	331 aa		4.79	□□□□□ -1.64
HER2	YMR293C	AVT4	P50944	713 aa		4.79	□□□□□ -1.64
HER2	YMR293C	YIP1	P53039	248 aa		4.79	□□□□□ -1.64
HER2	YMR293C	PCP1	P53259	346 aa		4.79	□□□□□ -1.64
HER2	YMR293C	VPS9	P54787	451 aa		4.79	□□□□□ -1.64
HER2	YMR293C	YMR130W	Q04223	302 aa		4.79	□□□□□ -1.64
HER2	YMR293C	VPS15	P22219	1454 aa		4.79	□□□□□ -1.64
HER2	YMR293C	HIS4	P00815	799 aa	Known RBP	4.78	□□□□□ -1.64
HER2	YMR293C	SRV2	P17555	526 aa	Known RBP	4.78	□□□□□ -1.64
HER2	YMR293C	APE2	P32454	952 aa	Known RBP	4.78	□□□□□ -1.64
HER2	YMR293C	NIP1	P32497	812 aa	Known RBP	4.78	□□□□□ -1.64
HER2	YMR293C	PEX5	P35056	612 aa		4.78	□□□□□ -1.64
HER2	YMR293C	FMP46	P36141	133 aa	Known RBP	4.78	□□□□□ -1.64
HER2	YMR293C	YCR041W	P37265	110 aa		4.78	□□□□□ -1.64
HER2	YMR293C	YHR054C	P38780	354 aa		4.78	□□□□□ -1.64
HER2	YMR293C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
HER2	YMR293C	DCS1	Q06151	350 aa		4.78	□□□□□ -1.64
HER2	YMR293C	UAF30	Q08747	228 aa		4.78	□□□□□ -1.64
HER2	YMR293C	MED2	Q12124	431 aa		4.78	□□□□□ -1.64
HER2	YMR293C	LPD1	P09624	499 aa	Known RBP	4.78	□□□□□ -1.64
HER2	YMR293C	YAR066W	P0CX18	203 aa		4.78	□□□□□ -1.64
HER2	YMR293C	YHR214W	P0CX19	203 aa		4.78	□□□□□ -1.64
HER2	YMR293C	RPI1	P23250	407 aa	Known RBP	4.78	□□□□□ -1.64
HER2	YMR293C	CRM1	P30822	1084 aa	Known RBP	4.78	□□□□□ -1.64
HER2	YMR293C	SOR1	P35497	357 aa	Known RBP	4.78	□□□□□ -1.64
HER2	YMR293C	SER3	P40054	469 aa		4.78	□□□□□ -1.64
HER2	YMR293C	YGL260W	P53056	76 aa		4.78	□□□□□ -1.64
HER2	YMR293C	YIF1	P53845	314 aa	Known RBP	4.78	□□□□□ -1.64
HER2	YMR293C	SOR2	Q07786	357 aa		4.78	□□□□□ -1.64
HER2	YMR293C	DIS3	Q08162	1001 aa	Known RBP	4.78	□□□□□ -1.64
HER2	YMR293C	PPT2	Q12036	173 aa		4.78	□□□□□ -1.64
HER2	YMR293C	GDH1	P07262	454 aa	Known RBP	4.77	□□□□□ -1.65
HER2	YMR293C	PRO3	P32263	286 aa	Known RBP	4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms