RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C TPK2P06245 380 aa4.48□□□□□ -1.69
EAR1YMR171C CHS1P08004 1131 aa4.48□□□□□ -1.69
EAR1YMR171C FAR1P21268 830 aa4.48□□□□□ -1.69
EAR1YMR171C ADY2P25613 283 aa4.48□□□□□ -1.69
EAR1YMR171C BRF1P29056 596 aa4.48□□□□□ -1.69
EAR1YMR171C SMI1P32566 505 aa4.48□□□□□ -1.69
EAR1YMR171C FRE1P32791 686 aa4.48□□□□□ -1.69
EAR1YMR171C BEM3P32873 1128 aa4.48□□□□□ -1.69
EAR1YMR171C RPT5P33297 434 aaKnown RBP4.48□□□□□ -1.69
EAR1YMR171C UTP11P34247 250 aaPredicted RBP4.48□□□□□ -1.69
EAR1YMR171C DBP7P36120 742 aaKnown RBP4.48□□□□□ -1.69
EAR1YMR171C ATG12P38316 186 aa4.48□□□□□ -1.69
EAR1YMR171C TDP1P38319 544 aa4.48□□□□□ -1.69
EAR1YMR171C MUP3P38734 546 aa4.48□□□□□ -1.69
EAR1YMR171C YHR182WP38870 785 aa4.48□□□□□ -1.69
EAR1YMR171C FAA2P39518 744 aa4.48□□□□□ -1.69
EAR1YMR171C YIL089WP40500 205 aa4.48□□□□□ -1.69
EAR1YMR171C RRT5P43607 289 aa4.48□□□□□ -1.69
EAR1YMR171C ASG7P46993 209 aa4.48□□□□□ -1.69
EAR1YMR171C NET1P47035 1189 aa4.48□□□□□ -1.69
EAR1YMR171C BNA3P47039 444 aaKnown RBP4.48□□□□□ -1.69
EAR1YMR171C RBL2P48606 106 aaKnown RBP4.48□□□□□ -1.69
EAR1YMR171C GPI1P53306 609 aa4.48□□□□□ -1.69
EAR1YMR171C BUD32P53323 261 aa4.48□□□□□ -1.69
EAR1YMR171C ALG11P53954 548 aaKnown RBP4.48□□□□□ -1.69
EAR1YMR171C MRPL13Q02204 264 aa4.48□□□□□ -1.69
EAR1YMR171C ATG21Q02887 496 aa4.48□□□□□ -1.69
EAR1YMR171C RNY1Q02933 434 aaKnown RBP4.48□□□□□ -1.69
EAR1YMR171C YML131WQ03102 365 aa4.48□□□□□ -1.69
EAR1YMR171C RAD30Q04049 632 aa4.48□□□□□ -1.69
EAR1YMR171C YMR321CQ04898 105 aa4.48□□□□□ -1.69
EAR1YMR171C PSR1Q07800 427 aa4.48□□□□□ -1.69
EAR1YMR171C ENT4Q07872 247 aa4.48□□□□□ -1.69
EAR1YMR171C ULA1Q12059 462 aa4.48□□□□□ -1.69
EAR1YMR171C CFT2Q12102 859 aaPredicted RBP4.48□□□□□ -1.69
EAR1YMR171C PSY3Q12318 242 aa4.48□□□□□ -1.69
EAR1YMR171C YMR030W-AQ3E760 96 aa4.48□□□□□ -1.69
EAR1YMR171C SNF4P12904 322 aa4.48□□□□□ -1.69
EAR1YMR171C STE12P13574 688 aa4.48□□□□□ -1.69
EAR1YMR171C FBA1P14540 359 aaKnown RBP4.48□□□□□ -1.69
EAR1YMR171C KSS1P14681 368 aa4.48□□□□□ -1.69
EAR1YMR171C SPB1P25582 841 aaPredicted RBP4.48□□□□□ -1.69
EAR1YMR171C RIB7P33312 244 aa4.48□□□□□ -1.69
EAR1YMR171C ASK1P35734 292 aa4.48□□□□□ -1.69
EAR1YMR171C SHE3P38272 425 aaKnown RBP4.48□□□□□ -1.69
EAR1YMR171C PCF11P39081 626 aaPredicted RBP4.48□□□□□ -1.69
EAR1YMR171C YAT2P40017 923 aa4.48□□□□□ -1.69
EAR1YMR171C DSE1P40077 573 aa4.48□□□□□ -1.69
EAR1YMR171C PSF2P40359 213 aa4.48□□□□□ -1.69
EAR1YMR171C SMK1P41808 388 aa4.48□□□□□ -1.69
EAR1YMR171C ASN2P49090 572 aaKnown RBP4.48□□□□□ -1.69
EAR1YMR171C ALT2P52892 507 aa4.48□□□□□ -1.69
EAR1YMR171C YGL117WP53133 265 aa4.48□□□□□ -1.69
EAR1YMR171C COQ6P53318 479 aa4.48□□□□□ -1.69
EAR1YMR171C SLM2P53955 656 aa4.48□□□□□ -1.69
EAR1YMR171C REX2P54964 269 aaKnown RBP4.48□□□□□ -1.69
EAR1YMR171C MUB1Q03162 620 aa4.48□□□□□ -1.69
EAR1YMR171C RLI1Q03195 608 aaKnown RBP4.48□□□□□ -1.69
EAR1YMR171C YDR239CQ03780 787 aa4.48□□□□□ -1.69
EAR1YMR171C CSN9Q03981 162 aa4.48□□□□□ -1.69
EAR1YMR171C HSP31Q04432 237 aa4.48□□□□□ -1.69
EAR1YMR171C FAR10Q06001 478 aa4.48□□□□□ -1.69
EAR1YMR171C SUT2Q12286 268 aa4.48□□□□□ -1.69
EAR1YMR171C SUL2Q12325 893 aa4.48□□□□□ -1.69
EAR1YMR171C BCY1P07278 416 aaKnown RBP4.47□□□□□ -1.69
EAR1YMR171C NUF2P33895 451 aa4.47□□□□□ -1.69
EAR1YMR171C FSH1P38777 243 aaKnown RBP4.47□□□□□ -1.69
EAR1YMR171C PRM9P39551 298 aa4.47□□□□□ -1.69
EAR1YMR171C FAF1P40546 346 aaPredicted RBP4.47□□□□□ -1.69
EAR1YMR171C AIF1P52923 378 aa4.47□□□□□ -1.69
EAR1YMR171C NOP19P53317 196 aaPredicted RBP4.47□□□□□ -1.69
EAR1YMR171C LSM3P57743 89 aaKnown RBP4.47□□□□□ -1.69
EAR1YMR171C YMR155WQ03795 547 aa4.47□□□□□ -1.69
EAR1YMR171C FMP42Q04991 504 aa4.47□□□□□ -1.69
EAR1YMR171C YOR342CQ12182 319 aa4.47□□□□□ -1.69
EAR1YMR171C BRR1Q99177 341 aaPredicted RBP4.47□□□□□ -1.69
EAR1YMR171C ATP6P00854 259 aa4.46□□□□□ -1.7
EAR1YMR171C REP1P03871 373 aa4.46□□□□□ -1.7
EAR1YMR171C AAC1P04710 309 aa4.46□□□□□ -1.7
EAR1YMR171C COR1P07256 457 aa4.46□□□□□ -1.7
EAR1YMR171C GLN3P18494 730 aa4.46□□□□□ -1.7
EAR1YMR171C VPS3P23643 1011 aa4.46□□□□□ -1.7
EAR1YMR171C RVS161P25343 265 aaKnown RBP4.46□□□□□ -1.7
EAR1YMR171C YCR090CP25654 182 aaKnown RBP4.46□□□□□ -1.7
EAR1YMR171C GDA1P32621 518 aa4.46□□□□□ -1.7
EAR1YMR171C TFB1P32776 642 aa4.46□□□□□ -1.7
EAR1YMR171C UGP1P32861 499 aaKnown RBP4.46□□□□□ -1.7
EAR1YMR171C BUD2P33314 1104 aa4.46□□□□□ -1.7
EAR1YMR171C AGP2P38090 596 aa4.46□□□□□ -1.7
EAR1YMR171C IFA38P38286 347 aa4.46□□□□□ -1.7
EAR1YMR171C YHI9P38765 294 aa4.46□□□□□ -1.7
EAR1YMR171C APE4P38821 490 aa4.46□□□□□ -1.7
EAR1YMR171C ARO9P38840 513 aaPredicted RBP4.46□□□□□ -1.7
EAR1YMR171C CYC2P38909 366 aa4.46□□□□□ -1.7
EAR1YMR171C YHB1P39676 399 aaKnown RBP4.46□□□□□ -1.7
EAR1YMR171C THO1P40040 218 aaKnown RBP4.46□□□□□ -1.7
EAR1YMR171C RIC1P40395 1056 aa4.46□□□□□ -1.7
EAR1YMR171C MAF1P41910 395 aa4.46□□□□□ -1.7
EAR1YMR171C STB1P42845 420 aa4.46□□□□□ -1.7
EAR1YMR171C SWP82P43554 623 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 109.9 ms