RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C MUM3Q08750 479 aa3.88□□□□□ -1.79
ATG16YMR159C YPL199CQ08954 240 aa3.88□□□□□ -1.79
ATG16YMR159C THP3Q12049 470 aaKnown RBP3.88□□□□□ -1.79
ATG16YMR159C ERV2Q12284 196 aa3.88□□□□□ -1.79
ATG16YMR159C HSP42Q12329 375 aa3.88□□□□□ -1.79
ATG16YMR159C YLR278CQ05854 1341 aa3.88□□□□□ -1.79
ATG16YMR159C SPS22P25380 463 aa3.87□□□□□ -1.79
ATG16YMR159C RFC3P38629 340 aa3.87□□□□□ -1.79
ATG16YMR159C MST28P39552 234 aa3.87□□□□□ -1.79
ATG16YMR159C LSM5P40089 93 aaKnown RBP3.87□□□□□ -1.79
ATG16YMR159C YFL067WP43537 175 aa3.87□□□□□ -1.79
ATG16YMR159C PCP1P53259 346 aa3.87□□□□□ -1.79
ATG16YMR159C BTN2P53286 410 aa3.87□□□□□ -1.79
ATG16YMR159C YDR387CQ04162 555 aa3.87□□□□□ -1.79
ATG16YMR159C HEL2Q05580 639 aaKnown RBP3.87□□□□□ -1.79
ATG16YMR159C RRP45Q05636 305 aaKnown RBP3.87□□□□□ -1.79
ATG16YMR159C HHF1P02309 103 aaKnown RBP3.86□□□□□ -1.79
ATG16YMR159C SUP35P05453 685 aaKnown RBP3.86□□□□□ -1.79
ATG16YMR159C TIP1P27654 210 aaPredicted RBP3.86□□□□□ -1.79
ATG16YMR159C KRE2P27809 442 aa3.86□□□□□ -1.79
ATG16YMR159C SIN4P32259 974 aa3.86□□□□□ -1.79
ATG16YMR159C SDH3P33421 198 aa3.86□□□□□ -1.79
ATG16YMR159C PIM1P36775 1133 aa3.86□□□□□ -1.79
ATG16YMR159C ARA1P38115 344 aa3.86□□□□□ -1.79
ATG16YMR159C SAS2P40963 338 aa3.86□□□□□ -1.79
ATG16YMR159C YJR011CP47086 261 aaPredicted RBP3.86□□□□□ -1.79
ATG16YMR159C COS5P47187 383 aa3.86□□□□□ -1.79
ATG16YMR159C COS7Q07788 383 aa3.86□□□□□ -1.79
ATG16YMR159C SIL1Q08199 421 aa3.86□□□□□ -1.79
ATG16YMR159C YLR108CQ12259 485 aa3.86□□□□□ -1.79
ATG16YMR159C RAD61Q99359 647 aa3.86□□□□□ -1.79
ATG16YMR159C DEG1P31115 442 aaKnown RBP3.85□□□□□ -1.79
ATG16YMR159C APE2P32454 952 aaKnown RBP3.85□□□□□ -1.79
ATG16YMR159C PAD1P33751 242 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
ATG16YMR159C YBL059WP34224 193 aa3.85□□□□□ -1.79
ATG16YMR159C NTC20P38302 140 aaPredicted RBP3.85□□□□□ -1.79
ATG16YMR159C SDS24P38314 527 aa3.85□□□□□ -1.79
ATG16YMR159C YHR054CP38780 354 aa3.85□□□□□ -1.79
ATG16YMR159C ELP3Q02908 557 aaKnown RBP3.85□□□□□ -1.79
ATG16YMR159C YMR155WQ03795 547 aa3.85□□□□□ -1.79
ATG16YMR159C SPC19Q03954 165 aa3.85□□□□□ -1.79
ATG16YMR159C PBA1Q05778 276 aa3.85□□□□□ -1.79
ATG16YMR159C TIM18Q08749 192 aa3.85□□□□□ -1.79
ATG16YMR159C YOR387CQ08910 206 aa3.85□□□□□ -1.79
ATG16YMR159C RKM1Q08961 583 aaPredicted RBP3.85□□□□□ -1.79
ATG16YMR159C PKH2Q12236 1081 aaKnown RBP3.85□□□□□ -1.79
ATG16YMR159C SAM1P10659 382 aaKnown RBP3.84□□□□□ -1.79
ATG16YMR159C SAM2P19358 384 aaKnown RBP3.84□□□□□ -1.79
ATG16YMR159C REC107P21651 314 aa3.84□□□□□ -1.79
ATG16YMR159C RPI1P23250 407 aaKnown RBP3.84□□□□□ -1.79
ATG16YMR159C CPR4P25334 318 aa3.84□□□□□ -1.79
ATG16YMR159C GEX1P25596 615 aa3.84□□□□□ -1.79
ATG16YMR159C ARO2P28777 376 aaKnown RBP3.84□□□□□ -1.79
ATG16YMR159C YME2P32843 850 aa3.84□□□□□ -1.79
ATG16YMR159C STB6P36085 766 aa3.84□□□□□ -1.79
ATG16YMR159C RFS1P38234 210 aaKnown RBP3.84□□□□□ -1.79
ATG16YMR159C YIL067CP40514 678 aa3.84□□□□□ -1.79
ATG16YMR159C YNR048WP53740 393 aa3.84□□□□□ -1.79
ATG16YMR159C YIF1P53845 314 aaKnown RBP3.84□□□□□ -1.79
ATG16YMR159C SGT1Q08446 395 aa3.84□□□□□ -1.79
ATG16YMR159C RRG1Q12167 365 aaPredicted RBP3.84□□□□□ -1.79
ATG16YMR159C FUR1P18562 216 aaKnown RBP3.83□□□□□ -1.8
ATG16YMR159C RIB5P38145 238 aa3.83□□□□□ -1.8
ATG16YMR159C LYS1P38998 373 aaRIP-Chip data3.83□□□□□ -1.8 RIP-Chip
ATG16YMR159C REE1P40893 198 aa3.83□□□□□ -1.8
ATG16YMR159C OST1P41543 476 aaKnown RBP3.83□□□□□ -1.8
ATG16YMR159C GPD2P41911 440 aaKnown RBP3.83□□□□□ -1.8
ATG16YMR159C YGR210CP42942 411 aa3.83□□□□□ -1.8
ATG16YMR159C RPS0BP46654 252 aaKnown RBP3.83□□□□□ -1.8
ATG16YMR159C YGL138CP53122 345 aa3.83□□□□□ -1.8
ATG16YMR159C YGR250CP53316 781 aaKnown RBP3.83□□□□□ -1.8
ATG16YMR159C GOR1P53839 350 aa3.83□□□□□ -1.8
ATG16YMR159C SKO1Q02100 647 aa3.83□□□□□ -1.8
ATG16YMR159C YMR181CQ03231 154 aa3.83□□□□□ -1.8
ATG16YMR159C ARX1Q03862 593 aaKnown RBP3.83□□□□□ -1.8
ATG16YMR159C YPR022CQ12139 1133 aa3.83□□□□□ -1.8
ATG16YMR159C VAM3Q12241 283 aa3.83□□□□□ -1.8
ATG16YMR159C ARG4P04076 463 aaPredicted RBP3.82□□□□□ -1.8
ATG16YMR159C YCR051WP25631 222 aa3.82□□□□□ -1.8
ATG16YMR159C NAM9P27929 486 aa3.82□□□□□ -1.8
ATG16YMR159C SWH1P35845 1188 aa3.82□□□□□ -1.8
ATG16YMR159C BYE1P36106 594 aa3.82□□□□□ -1.8
ATG16YMR159C NDT80P38830 627 aa3.82□□□□□ -1.8
ATG16YMR159C FAA2P39518 744 aa3.82□□□□□ -1.8
ATG16YMR159C LAM5P43560 674 aa3.82□□□□□ -1.8
ATG16YMR159C FRE4P53746 719 aa3.82□□□□□ -1.8
ATG16YMR159C MDG1P53885 366 aa3.82□□□□□ -1.8
ATG16YMR159C KAP120Q02932 1032 aa3.82□□□□□ -1.8
ATG16YMR159C SMA2Q04658 369 aa3.82□□□□□ -1.8
ATG16YMR159C DON1Q05610 365 aa3.82□□□□□ -1.8
ATG16YMR159C MDM30Q05930 598 aa3.82□□□□□ -1.8
ATG16YMR159C ORT1Q12375 292 aa3.82□□□□□ -1.8
ATG16YMR159C ISN1Q99312 450 aa3.82□□□□□ -1.8
ATG16YMR159C YRF1-4O13559 1382 aa3.81□□□□□ -1.8
ATG16YMR159C TOF1P53840 1238 aa3.81□□□□□ -1.8
ATG16YMR159C SKI7Q08491 747 aaPredicted RBP3.81□□□□□ -1.8
ATG16YMR159C TEF1P02994 458 aaKnown RBP3.8□□□□□ -1.8
ATG16YMR159C CTR86P25355 563 aa3.8□□□□□ -1.8
ATG16YMR159C LSB5P25369 354 aa3.8□□□□□ -1.8
ATG16YMR159C RHB1P25378 209 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms