RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W SAC3P46674 1301 aa3.66□□□□□ -1.82
CSM3YMR048W MET17P06106 444 aa3.65□□□□□ -1.83
CSM3YMR048W CDC31P06704 161 aaKnown RBP3.65□□□□□ -1.83
CSM3YMR048W TPM1P17536 199 aaKnown RBP3.65□□□□□ -1.83
CSM3YMR048W RRT2P38332 387 aa3.65□□□□□ -1.83
CSM3YMR048W YEL057CP39983 233 aa3.65□□□□□ -1.83
CSM3YMR048W IRC6P43615 237 aa3.65□□□□□ -1.83
CSM3YMR048W SRB7P47822 140 aa3.65□□□□□ -1.83
CSM3YMR048W MSC1Q03104 513 aa3.65□□□□□ -1.83
CSM3YMR048W FIN1Q03898 291 aa3.65□□□□□ -1.83
CSM3YMR048W BSC6Q08280 497 aa3.65□□□□□ -1.83
CSM3YMR048W HNT3Q08702 217 aa3.65□□□□□ -1.83
CSM3YMR048W YCL021W-AQ96VH3 125 aa3.65□□□□□ -1.83
CSM3YMR048W HSH49Q99181 213 aaPredicted RBP3.65□□□□□ -1.83
CSM3YMR048W RED1P14291 827 aa3.64□□□□□ -1.83
CSM3YMR048W CKA1P15790 372 aa3.64□□□□□ -1.83
CSM3YMR048W WBP1P33767 430 aaKnown RBP3.64□□□□□ -1.83
CSM3YMR048W PFF1P38244 976 aa3.64□□□□□ -1.83
CSM3YMR048W SHO1P40073 367 aa3.64□□□□□ -1.83
CSM3YMR048W MET28P40573 187 aa3.64□□□□□ -1.83
CSM3YMR048W ALK1P43633 760 aaKnown RBP3.64□□□□□ -1.83
CSM3YMR048W CAF130P53280 1122 aaPredicted RBP3.64□□□□□ -1.83
CSM3YMR048W MSO1P53604 210 aaKnown RBP3.64□□□□□ -1.83
CSM3YMR048W RLI1Q03195 608 aaKnown RBP3.64□□□□□ -1.83
CSM3YMR048W COQ9Q05779 260 aa3.64□□□□□ -1.83
CSM3YMR048W THP1Q08231 455 aa3.64□□□□□ -1.83
CSM3YMR048W YRF1-3P0CX14 1859 aa3.64□□□□□ -1.83
CSM3YMR048W YRF1-7P0CX15 1859 aa3.64□□□□□ -1.83
CSM3YMR048W YRF1-6P53819 1859 aa3.64□□□□□ -1.83
CSM3YMR048W YIL177CP40434 1758 aa3.63□□□□□ -1.83
CSM3YMR048W YJL225CP40889 1758 aa3.63□□□□□ -1.83
CSM3YMR048W GPI10P30777 616 aa3.63□□□□□ -1.83
CSM3YMR048W SHP1P34223 423 aa3.63□□□□□ -1.83
CSM3YMR048W VID24P38263 362 aa3.63□□□□□ -1.83
CSM3YMR048W ALG8P40351 577 aa3.63□□□□□ -1.83
CSM3YMR048W BUD32P53323 261 aa3.63□□□□□ -1.83
CSM3YMR048W SYF1Q04048 859 aaPredicted RBP3.63□□□□□ -1.83
CSM3YMR048W YLR287CQ05881 355 aa3.63□□□□□ -1.83
CSM3YMR048W MRPL51Q06090 140 aaPredicted RBP3.63□□□□□ -1.83
CSM3YMR048W ATG29Q12092 213 aa3.63□□□□□ -1.83
CSM3YMR048W SNU66Q12420 587 aaPredicted RBP3.63□□□□□ -1.83
CSM3YMR048W FUR1P18562 216 aaKnown RBP3.62□□□□□ -1.83
CSM3YMR048W SGV1P23293 657 aaKnown RBP3.62□□□□□ -1.83
CSM3YMR048W BNA4P38169 460 aa3.62□□□□□ -1.83
CSM3YMR048W MUM2P38236 366 aa3.62□□□□□ -1.83
CSM3YMR048W PRE5P40302 234 aaKnown RBP3.62□□□□□ -1.83
CSM3YMR048W YJR154WP47181 346 aa3.62□□□□□ -1.83
CSM3YMR048W SPC19Q03954 165 aa3.62□□□□□ -1.83
CSM3YMR048W RPC11Q04307 110 aaPredicted RBP3.62□□□□□ -1.83
CSM3YMR048W GRX6Q12438 231 aa3.62□□□□□ -1.83
CSM3YMR048W SWI1P09547 1314 aa3.62□□□□□ -1.83
CSM3YMR048W PUT3P25502 979 aaPredicted RBP3.61□□□□□ -1.83
CSM3YMR048W YCR022CP25620 114 aa3.61□□□□□ -1.83
CSM3YMR048W MRE11P32829 692 aa3.61□□□□□ -1.83
CSM3YMR048W PMT1P33775 817 aa3.61□□□□□ -1.83
CSM3YMR048W CMC1P36064 111 aa3.61□□□□□ -1.83
CSM3YMR048W YHR210CP38893 341 aa3.61□□□□□ -1.83
CSM3YMR048W TWF1P53250 332 aa3.61□□□□□ -1.83
CSM3YMR048W BTN2P53286 410 aa3.61□□□□□ -1.83
CSM3YMR048W ERO1Q03103 563 aa3.61□□□□□ -1.83
CSM3YMR048W TAF11Q04226 346 aa3.61□□□□□ -1.83
CSM3YMR048W CSI1Q04368 295 aa3.61□□□□□ -1.83
CSM3YMR048W PAL1Q05518 499 aaKnown RBP3.61□□□□□ -1.83
CSM3YMR048W VPS74Q06385 345 aa3.61□□□□□ -1.83
CSM3YMR048W SEC39Q12745 709 aa3.61□□□□□ -1.83
CSM3YMR048W COR1P07256 457 aa3.6□□□□□ -1.83
CSM3YMR048W PEP4P07267 405 aaKnown RBP3.6□□□□□ -1.83
CSM3YMR048W ROX1P25042 368 aa3.6□□□□□ -1.83
CSM3YMR048W YCR007CP25354 239 aa3.6□□□□□ -1.83
CSM3YMR048W YEL045CP32616 141 aa3.6□□□□□ -1.83
CSM3YMR048W OTU2P38747 307 aaKnown RBP3.6□□□□□ -1.83
CSM3YMR048W MET18P40469 1032 aa3.6□□□□□ -1.83
CSM3YMR048W HXT14P42833 540 aa3.6□□□□□ -1.83
CSM3YMR048W SCD6P45978 349 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
CSM3YMR048W AIM22P47051 409 aa3.6□□□□□ -1.83
CSM3YMR048W MLC1P53141 149 aa3.6□□□□□ -1.83
CSM3YMR048W ZPR1P53303 486 aaKnown RBP3.6□□□□□ -1.83
CSM3YMR048W SLD5Q03406 294 aa3.6□□□□□ -1.83
CSM3YMR048W MRD1Q06106 887 aaKnown RBP3.6□□□□□ -1.83
CSM3YMR048W RTN2Q12443 393 aa3.6□□□□□ -1.83
CSM3YMR048W RRP12Q12754 1228 aaKnown RBP3.6□□□□□ -1.83
CSM3YMR048W YDL007C-AQ2V2Q0 85 aa3.6□□□□□ -1.83
CSM3YMR048W BRR1Q99177 341 aaPredicted RBP3.6□□□□□ -1.83
CSM3YMR048W RAD50P12753 1312 aa3.6□□□□□ -1.83
CSM3YMR048W PDR18P53756 1333 aa3.6□□□□□ -1.83
CSM3YMR048W RIM15P43565 1770 aa3.59□□□□□ -1.83
CSM3YMR048W RAD52P06778 471 aaKnown RBP3.59□□□□□ -1.83
CSM3YMR048W RPL31BP0C2H9 113 aaKnown RBP3.59□□□□□ -1.83
CSM3YMR048W SPT15P13393 240 aaKnown RBP3.59□□□□□ -1.83
CSM3YMR048W MBB1P39534 108 aa3.59□□□□□ -1.83
CSM3YMR048W POP1P41812 875 aa3.59□□□□□ -1.83
CSM3YMR048W WSC2P53832 503 aa3.59□□□□□ -1.83
CSM3YMR048W IRC15Q02733 499 aa3.59□□□□□ -1.83
CSM3YMR048W IVY1Q04934 453 aa3.59□□□□□ -1.83
CSM3YMR048W RRG1Q12167 365 aaPredicted RBP3.59□□□□□ -1.83
CSM3YMR048W NCE102Q12207 173 aaRIP-Chip data3.59□□□□□ -1.83not detected
CSM3YMR048W CTF3Q12748 733 aa3.59□□□□□ -1.83
CSM3YMR048W YER078W-AQ3E7A2 54 aa3.59□□□□□ -1.83
CSM3YMR048W PRP2P20095 876 aaPredicted RBP3.58□□□□□ -1.84
CSM3YMR048W CLB3P24870 427 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms