RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W YBT1P32386 1661 aa0.69□□□□□ -2.3
PRP39YML046W REC114P32841 428 aa0.69□□□□□ -2.3
PRP39YML046W MAL33P38157 468 aa0.69□□□□□ -2.3
PRP39YML046W ACA1P39970 489 aa0.69□□□□□ -2.3
PRP39YML046W VTH1P40438 1549 aa0.69□□□□□ -2.3
PRP39YML046W VTH2P40890 1549 aa0.69□□□□□ -2.3
PRP39YML046W URB2P47108 1174 aa0.69□□□□□ -2.3
PRP39YML046W YGR266WP53326 701 aa0.69□□□□□ -2.3
PRP39YML046W ADA2Q02336 434 aa0.69□□□□□ -2.3
PRP39YML046W PPM1Q04081 328 aa0.69□□□□□ -2.3
PRP39YML046W LIP2Q06005 328 aa0.69□□□□□ -2.3
PRP39YML046W MMS22Q06164 1454 aa0.69□□□□□ -2.3
PRP39YML046W RIX7Q07844 837 aaKnown RBP0.69□□□□□ -2.3
PRP39YML046W KEL3Q08979 651 aaPredicted RBP0.69□□□□□ -2.3
PRP39YML046W NUP159P40477 1460 aa0.69□□□□□ -2.3
PRP39YML046W TOP1P04786 769 aa0.69□□□□□ -2.3
PRP39YML046W LEU4P06208 619 aaKnown RBP0.69□□□□□ -2.3
PRP39YML046W NAM2P11325 894 aa0.69□□□□□ -2.3
PRP39YML046W SPO7P18410 259 aa0.69□□□□□ -2.3
PRP39YML046W REG2P38232 338 aa0.69□□□□□ -2.3
PRP39YML046W APT1P49435 187 aaKnown RBP0.69□□□□□ -2.3
PRP39YML046W PEX8P53248 589 aa0.69□□□□□ -2.3
PRP39YML046W CBK1P53894 756 aa0.69□□□□□ -2.3
PRP39YML046W YDR239CQ03780 787 aa0.69□□□□□ -2.3
PRP39YML046W VIP1Q06685 1146 aaKnown RBP0.69□□□□□ -2.3
PRP39YML046W MCH1Q07376 486 aa0.69□□□□□ -2.3
PRP39YML046W NDE2Q07500 545 aa0.69□□□□□ -2.3
PRP39YML046W LUC7Q07508 261 aaPredicted RBP0.69□□□□□ -2.3
PRP39YML046W CTI6Q08923 506 aa0.69□□□□□ -2.3
PRP39YML046W FMP40Q08968 688 aaPredicted RBP0.69□□□□□ -2.3
PRP39YML046W RKM5Q12367 367 aa0.69□□□□□ -2.3
PRP39YML046W ENT1Q12518 454 aa0.69□□□□□ -2.3
PRP39YML046W RAD61Q99359 647 aa0.69□□□□□ -2.3
PRP39YML046W ESP1Q03018 1630 aa0.68□□□□□ -2.3
PRP39YML046W ARD1P07347 238 aaPredicted RBP0.68□□□□□ -2.3
PRP39YML046W ART10P18634 518 aaKnown RBP0.68□□□□□ -2.3
PRP39YML046W SNT1P25357 1226 aa0.68□□□□□ -2.3
PRP39YML046W YIH1P25637 258 aa0.68□□□□□ -2.3
PRP39YML046W MUD1P32605 298 aaKnown RBP0.68□□□□□ -2.3
PRP39YML046W RML2P32611 393 aa0.68□□□□□ -2.3
PRP39YML046W SPT10P35208 640 aa0.68□□□□□ -2.3
PRP39YML046W YAP3P38749 330 aa0.68□□□□□ -2.3
PRP39YML046W MIG3P39943 394 aa0.68□□□□□ -2.3
PRP39YML046W YFL040WP43562 540 aa0.68□□□□□ -2.3
PRP39YML046W LYS4P49367 693 aaPredicted RBP0.68□□□□□ -2.3
PRP39YML046W MTM1P53320 366 aa0.68□□□□□ -2.3
PRP39YML046W PDS5Q04264 1277 aa0.68□□□□□ -2.3
PRP39YML046W PKH2Q12236 1081 aaKnown RBP0.68□□□□□ -2.3
PRP39YML046W RPO21P04050 1733 aaKnown RBP0.68□□□□□ -2.3
PRP39YML046W HSC82P15108 705 aaKnown RBP0.67□□□□□ -2.3
PRP39YML046W EST1P17214 699 aaPredicted RBP0.67□□□□□ -2.3
PRP39YML046W RPI1P23250 407 aaKnown RBP0.67□□□□□ -2.3
PRP39YML046W MST28P39552 234 aa0.67□□□□□ -2.3
PRP39YML046W YER186CP40101 306 aa0.67□□□□□ -2.3
PRP39YML046W SEC9P40357 651 aa0.67□□□□□ -2.3
PRP39YML046W YPS6P40583 537 aa0.67□□□□□ -2.3
PRP39YML046W EAF6P47128 113 aa0.67□□□□□ -2.3
PRP39YML046W PCP1P53259 346 aa0.67□□□□□ -2.3
PRP39YML046W HEF3P53978 1044 aaKnown RBP0.67□□□□□ -2.3
PRP39YML046W VMR1P38735 1592 aa0.67□□□□□ -2.3
PRP39YML046W SSM4P40318 1319 aa0.67□□□□□ -2.3
PRP39YML046W AUR1P36107 401 aaPredicted RBP0.67□□□□□ -2.3
PRP39YML046W YIL089WP40500 205 aa0.67□□□□□ -2.3
PRP39YML046W RRT6P53117 311 aaPredicted RBP0.67□□□□□ -2.3
PRP39YML046W IPI3P53877 555 aa0.67□□□□□ -2.3
PRP39YML046W HXT11P54862 567 aa0.67□□□□□ -2.3
PRP39YML046W MRPS16Q02608 121 aa0.67□□□□□ -2.3
PRP39YML046W TRM8Q12009 286 aa0.67□□□□□ -2.3
PRP39YML046W YIL177CP40434 1758 aa0.66□□□□□ -2.3
PRP39YML046W YJL225CP40889 1758 aa0.66□□□□□ -2.3
PRP39YML046W YSP2Q06681 1438 aa0.66□□□□□ -2.3
PRP39YML046W RAV1P47104 1357 aa0.66□□□□□ -2.3
PRP39YML046W ATP4P05626 244 aa0.66□□□□□ -2.3
PRP39YML046W YCK1P23291 538 aa0.66□□□□□ -2.3
PRP39YML046W AAT2P23542 418 aaKnown RBP0.66□□□□□ -2.3
PRP39YML046W CSE2P33308 149 aa0.66□□□□□ -2.3
PRP39YML046W ALG5P40350 334 aa0.66□□□□□ -2.3
PRP39YML046W YFL012WP43580 148 aa0.66□□□□□ -2.3
PRP39YML046W YMR181CQ03231 154 aa0.66□□□□□ -2.3
PRP39YML046W YML037CQ03703 340 aa0.66□□□□□ -2.3
PRP39YML046W MFB1Q04922 465 aa0.66□□□□□ -2.3
PRP39YML046W SSP2Q08646 371 aa0.66□□□□□ -2.3
PRP39YML046W TIM18Q08749 192 aa0.66□□□□□ -2.3
PRP39YML046W SNX3Q08826 162 aaKnown RBP0.66□□□□□ -2.3
PRP39YML046W PLP2Q12017 286 aa0.66□□□□□ -2.3
PRP39YML046W IZH2Q12442 317 aa0.66□□□□□ -2.3
PRP39YML046W TSC11P40061 1430 aa0.66□□□□□ -2.3
PRP39YML046W COX4P04037 155 aa0.65□□□□□ -2.3
PRP39YML046W COR1P07256 457 aa0.65□□□□□ -2.3
PRP39YML046W DPH2P32461 534 aa0.65□□□□□ -2.3
PRP39YML046W SLC1P33333 303 aa0.65□□□□□ -2.3
PRP39YML046W YCR041WP37265 110 aa0.65□□□□□ -2.3
PRP39YML046W RTC2P38279 296 aa0.65□□□□□ -2.3
PRP39YML046W ERP2P39704 215 aa0.65□□□□□ -2.3
PRP39YML046W YER184CP39961 794 aa0.65□□□□□ -2.3
PRP39YML046W KTR6P54070 446 aa0.65□□□□□ -2.3
PRP39YML046W RAD30Q04049 632 aa0.65□□□□□ -2.3
PRP39YML046W SOV1Q04748 898 aa0.65□□□□□ -2.3
PRP39YML046W COQ9Q05779 260 aa0.65□□□□□ -2.3
PRP39YML046W VID22Q05934 901 aa0.65□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms