RNA–Protein interactions for RNA: YLR410W-A

YLR410W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YLR410W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR410W-AYLR410W-A RPN12P32496 274 aa3.65□□□□□ -1.83
YLR410W-AYLR410W-A STB6P36085 766 aa3.65□□□□□ -1.83
YLR410W-AYLR410W-A RIB5P38145 238 aa3.65□□□□□ -1.83
YLR410W-AYLR410W-A MIX23P38162 196 aa3.65□□□□□ -1.83
YLR410W-AYLR410W-A RFS1P38234 210 aaKnown RBP3.65□□□□□ -1.83
YLR410W-AYLR410W-A VHC1P38329 1120 aa3.65□□□□□ -1.83
YLR410W-AYLR410W-A NCA3P46955 337 aa3.65□□□□□ -1.83
YLR410W-AYLR410W-A TOF1P53840 1238 aa3.65□□□□□ -1.83
YLR410W-AYLR410W-A PKH2Q12236 1081 aaKnown RBP3.65□□□□□ -1.83
YLR410W-AYLR410W-A HIS4P00815 799 aaKnown RBP3.64□□□□□ -1.83
YLR410W-AYLR410W-A PRP21P32524 280 aaPredicted RBP3.64□□□□□ -1.83
YLR410W-AYLR410W-A ECM25P32525 599 aa3.64□□□□□ -1.83
YLR410W-AYLR410W-A YHR054CP38780 354 aa3.64□□□□□ -1.83
YLR410W-AYLR410W-A MST28P39552 234 aa3.64□□□□□ -1.83
YLR410W-AYLR410W-A SDT1P53078 280 aa3.64□□□□□ -1.83
YLR410W-AYLR410W-A YIF1P53845 314 aaKnown RBP3.64□□□□□ -1.83
YLR410W-AYLR410W-A MDG1P53885 366 aa3.64□□□□□ -1.83
YLR410W-AYLR410W-A ADD37Q03233 198 aa3.64□□□□□ -1.83
YLR410W-AYLR410W-A TIM18Q08749 192 aa3.64□□□□□ -1.83
YLR410W-AYLR410W-A RRD2Q12461 358 aa3.64□□□□□ -1.83
YLR410W-AYLR410W-A RED1P14291 827 aa3.63□□□□□ -1.83
YLR410W-AYLR410W-A CLB3P24870 427 aa3.63□□□□□ -1.83
YLR410W-AYLR410W-A TIP1P27654 210 aaPredicted RBP3.63□□□□□ -1.83
YLR410W-AYLR410W-A YIM1P28625 365 aa3.63□□□□□ -1.83
YLR410W-AYLR410W-A HCS1P34243 683 aa3.63□□□□□ -1.83
YLR410W-AYLR410W-A ARA1P38115 344 aa3.63□□□□□ -1.83
YLR410W-AYLR410W-A NAB3P38996 802 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
YLR410W-AYLR410W-A CCT2P39076 527 aaKnown RBP3.63□□□□□ -1.83
YLR410W-AYLR410W-A PRE5P40302 234 aaKnown RBP3.63□□□□□ -1.83
YLR410W-AYLR410W-A ESL1P40456 1118 aa3.63□□□□□ -1.83
YLR410W-AYLR410W-A YPR022CQ12139 1133 aa3.63□□□□□ -1.83
YLR410W-AYLR410W-A RTN2Q12443 393 aa3.63□□□□□ -1.83
YLR410W-AYLR410W-A INH1P01097 85 aa3.62□□□□□ -1.83
YLR410W-AYLR410W-A HXT3P32466 567 aaKnown RBP3.62□□□□□ -1.83
YLR410W-AYLR410W-A MTC6P38849 526 aa3.62□□□□□ -1.83
YLR410W-AYLR410W-A PRM5P40476 318 aa3.62□□□□□ -1.83
YLR410W-AYLR410W-A VMA13P41807 478 aaKnown RBP3.62□□□□□ -1.83
YLR410W-AYLR410W-A FMS1P50264 508 aa3.62□□□□□ -1.83
YLR410W-AYLR410W-A COG4Q06096 861 aa3.62□□□□□ -1.83
YLR410W-AYLR410W-A REX4Q08237 289 aa3.62□□□□□ -1.83
YLR410W-AYLR410W-A RRG7Q08774 242 aaPredicted RBP3.62□□□□□ -1.83
YLR410W-AYLR410W-A TMS1Q12116 473 aa3.62□□□□□ -1.83
YLR410W-AYLR410W-A RTP1Q12751 981 aa3.62□□□□□ -1.83
YLR410W-AYLR410W-A RAD61Q99359 647 aa3.62□□□□□ -1.83
YLR410W-AYLR410W-A ARG4P04076 463 aaPredicted RBP3.61□□□□□ -1.83
YLR410W-AYLR410W-A SRV2P17555 526 aaKnown RBP3.61□□□□□ -1.83
YLR410W-AYLR410W-A PET123P17558 318 aa3.61□□□□□ -1.83
YLR410W-AYLR410W-A CLC1P17891 233 aa3.61□□□□□ -1.83
YLR410W-AYLR410W-A REE1P40893 198 aa3.61□□□□□ -1.83
YLR410W-AYLR410W-A DLD2P46681 530 aaKnown RBP3.61□□□□□ -1.83
YLR410W-AYLR410W-A FRE4P53746 719 aa3.61□□□□□ -1.83
YLR410W-AYLR410W-A KTR5P53966 522 aaPredicted RBP3.61□□□□□ -1.83
YLR410W-AYLR410W-A HER2Q03557 464 aa3.61□□□□□ -1.83
YLR410W-AYLR410W-A SGT1Q08446 395 aa3.61□□□□□ -1.83
YLR410W-AYLR410W-A TEF1P02994 458 aaKnown RBP3.6□□□□□ -1.83
YLR410W-AYLR410W-A RIP1P08067 215 aa3.6□□□□□ -1.83
YLR410W-AYLR410W-A DAL2P25335 343 aa3.6□□□□□ -1.83
YLR410W-AYLR410W-A PIM1P36775 1133 aa3.6□□□□□ -1.83
YLR410W-AYLR410W-A FAA2P39518 744 aa3.6□□□□□ -1.83
YLR410W-AYLR410W-A YMR181CQ03231 154 aa3.6□□□□□ -1.83
YLR410W-AYLR410W-A PPM1Q04081 328 aa3.6□□□□□ -1.83
YLR410W-AYLR410W-A TAF11Q04226 346 aa3.6□□□□□ -1.83
YLR410W-AYLR410W-A HRI1Q05905 244 aaKnown RBP3.6□□□□□ -1.83
YLR410W-AYLR410W-A SIL1Q08199 421 aa3.6□□□□□ -1.83
YLR410W-AYLR410W-A HSP42Q12329 375 aa3.6□□□□□ -1.83
YLR410W-AYLR410W-A CLN3P13365 580 aa3.59□□□□□ -1.83
YLR410W-AYLR410W-A SLY1P22213 666 aa3.59□□□□□ -1.83
YLR410W-AYLR410W-A SAS3P34218 831 aa3.59□□□□□ -1.83
YLR410W-AYLR410W-A NTC20P38302 140 aaPredicted RBP3.59□□□□□ -1.83
YLR410W-AYLR410W-A LYS1P38998 373 aaRIP-Chip data3.59□□□□□ -1.83not detected
YLR410W-AYLR410W-A RRP45Q05636 305 aaKnown RBP3.59□□□□□ -1.83
YLR410W-AYLR410W-A MRPL35Q06678 367 aa3.59□□□□□ -1.83
YLR410W-AYLR410W-A RVS161P25343 265 aaKnown RBP3.58□□□□□ -1.84
YLR410W-AYLR410W-A RPS0BP46654 252 aaKnown RBP3.58□□□□□ -1.84
YLR410W-AYLR410W-A HMS2P47175 358 aa3.58□□□□□ -1.84
YLR410W-AYLR410W-A YNR048WP53740 393 aa3.58□□□□□ -1.84
YLR410W-AYLR410W-A RPA49Q01080 415 aaPredicted RBP3.58□□□□□ -1.84
YLR410W-AYLR410W-A PEX25Q02969 394 aa3.58□□□□□ -1.84
YLR410W-AYLR410W-A YLR287CQ05881 355 aa3.58□□□□□ -1.84
YLR410W-AYLR410W-A TMC1Q08422 150 aaPredicted RBP3.58□□□□□ -1.84
YLR410W-AYLR410W-A SNX3Q08826 162 aaKnown RBP3.58□□□□□ -1.84
YLR410W-AYLR410W-A HRT3Q12347 344 aa3.58□□□□□ -1.84
YLR410W-AYLR410W-A REC107P21651 314 aa3.57□□□□□ -1.84
YLR410W-AYLR410W-A MNS1P32906 549 aa3.57□□□□□ -1.84
YLR410W-AYLR410W-A KKQ8P36004 724 aa3.57□□□□□ -1.84
YLR410W-AYLR410W-A PAN6P40459 309 aa3.57□□□□□ -1.84
YLR410W-AYLR410W-A SAS2P40963 338 aa3.57□□□□□ -1.84
YLR410W-AYLR410W-A MDM1Q01846 1127 aa3.57□□□□□ -1.84
YLR410W-AYLR410W-A SYF1Q04048 859 aaPredicted RBP3.57□□□□□ -1.84
YLR410W-AYLR410W-A SFI1Q12369 946 aa3.57□□□□□ -1.84
YLR410W-AYLR410W-A CDC31P06704 161 aaKnown RBP3.56□□□□□ -1.84
YLR410W-AYLR410W-A SPO7P18410 259 aa3.56□□□□□ -1.84
YLR410W-AYLR410W-A ISY1P21374 235 aaPredicted RBP3.56□□□□□ -1.84
YLR410W-AYLR410W-A LSB5P25369 354 aa3.56□□□□□ -1.84
YLR410W-AYLR410W-A ERG3P32353 365 aa3.56□□□□□ -1.84
YLR410W-AYLR410W-A MUD1P32605 298 aaKnown RBP3.56□□□□□ -1.84
YLR410W-AYLR410W-A SWE1P32944 819 aa3.56□□□□□ -1.84
YLR410W-AYLR410W-A SWD3P38123 315 aa3.56□□□□□ -1.84
YLR410W-AYLR410W-A YJR011CP47086 261 aaPredicted RBP3.56□□□□□ -1.84
YLR410W-AYLR410W-A CWC25P53854 179 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms