RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C SPE3Q12074 293 aaKnown RBP4.8□□□□□ -1.64
NMD4YLR363C RRD2Q12461 358 aa4.8□□□□□ -1.64
NMD4YLR363C MAS1P10507 462 aa4.79□□□□□ -1.64
NMD4YLR363C ISY1P21374 235 aaPredicted RBP4.79□□□□□ -1.64
NMD4YLR363C PUP3P25451 205 aaKnown RBP4.79□□□□□ -1.64
NMD4YLR363C CMK1P27466 446 aaKnown RBP4.79□□□□□ -1.64
NMD4YLR363C LAG1P38703 411 aa4.79□□□□□ -1.64
NMD4YLR363C AXL1P40851 1208 aa4.79□□□□□ -1.64
NMD4YLR363C VTC2P43585 828 aa4.79□□□□□ -1.64
NMD4YLR363C FYV8P46949 817 aaKnown RBP4.79□□□□□ -1.64
NMD4YLR363C TOF1P53840 1238 aa4.79□□□□□ -1.64
NMD4YLR363C TDA7P53882 636 aaPredicted RBP4.79□□□□□ -1.64
NMD4YLR363C RSM23Q01163 450 aa4.79□□□□□ -1.64
NMD4YLR363C YMR160WQ03823 816 aa4.79□□□□□ -1.64
NMD4YLR363C DPB4Q04603 196 aaKnown RBP4.79□□□□□ -1.64
NMD4YLR363C RTT103Q05543 409 aa4.79□□□□□ -1.64
NMD4YLR363C TOR1P35169 2470 aa4.79□□□□□ -1.64
NMD4YLR363C GAL80P04387 435 aa4.78□□□□□ -1.64
NMD4YLR363C VPS3P23643 1011 aa4.78□□□□□ -1.64
NMD4YLR363C PRR1P28708 518 aa4.78□□□□□ -1.64
NMD4YLR363C ACH1P32316 526 aa4.78□□□□□ -1.64
NMD4YLR363C AUR1P36107 401 aaPredicted RBP4.78□□□□□ -1.64
NMD4YLR363C YER130CP39959 443 aa4.78□□□□□ -1.64
NMD4YLR363C PTR3P43606 678 aa4.78□□□□□ -1.64
NMD4YLR363C FAR3P46671 204 aa4.78□□□□□ -1.64
NMD4YLR363C CUE3P53137 624 aaKnown RBP4.78□□□□□ -1.64
NMD4YLR363C YGR127WP53275 312 aa4.78□□□□□ -1.64
NMD4YLR363C MEP3P53390 489 aa4.78□□□□□ -1.64
NMD4YLR363C NOP13P53883 403 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
NMD4YLR363C EFM6P53970 246 aa4.78□□□□□ -1.64
NMD4YLR363C YSA1Q01976 231 aa4.78□□□□□ -1.64
NMD4YLR363C ADA2Q02336 434 aa4.78□□□□□ -1.64
NMD4YLR363C FMP45Q07651 309 aa4.78□□□□□ -1.64
NMD4YLR363C SHS1Q07657 551 aa4.78□□□□□ -1.64
NMD4YLR363C SGT2Q12118 346 aaKnown RBP4.78□□□□□ -1.64
NMD4YLR363C PDA1P16387 420 aaKnown RBP4.77□□□□□ -1.65
NMD4YLR363C TYR1P20049 452 aa4.77□□□□□ -1.65
NMD4YLR363C BUD5P25300 642 aaPredicted RBP4.77□□□□□ -1.65
NMD4YLR363C PRX1P34227 261 aaKnown RBP4.77□□□□□ -1.65
NMD4YLR363C YHR054CP38780 354 aa4.77□□□□□ -1.65
NMD4YLR363C YTA12P40341 825 aa4.77□□□□□ -1.65
NMD4YLR363C YLR422WQ06409 1932 aa4.77□□□□□ -1.65
NMD4YLR363C NAT1P12945 854 aaKnown RBP4.76□□□□□ -1.65
NMD4YLR363C PEX34P25584 144 aa4.76□□□□□ -1.65
NMD4YLR363C BMH1P29311 267 aaKnown RBP4.76□□□□□ -1.65
NMD4YLR363C MTR2P34232 184 aaKnown RBP4.76□□□□□ -1.65
NMD4YLR363C COY1P34237 679 aa4.76□□□□□ -1.65
NMD4YLR363C YKL100CP34248 587 aa4.76□□□□□ -1.65
NMD4YLR363C KDX1P36005 433 aa4.76□□□□□ -1.65
NMD4YLR363C YBL029WP38201 376 aa4.76□□□□□ -1.65
NMD4YLR363C SHE3P38272 425 aaKnown RBP4.76□□□□□ -1.65
NMD4YLR363C NAB3P38996 802 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
NMD4YLR363C TAF10Q12030 206 aa4.76□□□□□ -1.65
NMD4YLR363C PDH1Q12428 516 aaKnown RBP4.76□□□□□ -1.65
NMD4YLR363C CTF3Q12748 733 aa4.76□□□□□ -1.65
NMD4YLR363C FAB1P34756 2278 aa4.75□□□□□ -1.65
NMD4YLR363C RPL22AP05749 121 aaKnown RBP4.75□□□□□ -1.65
NMD4YLR363C ASP3-2P0CX77 362 aa4.75□□□□□ -1.65
NMD4YLR363C ASP3-3P0CX78 362 aa4.75□□□□□ -1.65
NMD4YLR363C ASP3-4P0CX79 362 aa4.75□□□□□ -1.65
NMD4YLR363C ASP3-1P0CZ17 362 aa4.75□□□□□ -1.65
NMD4YLR363C RPL4AP10664 362 aaKnown RBP4.75□□□□□ -1.65
NMD4YLR363C HSC82P15108 705 aaKnown RBP4.75□□□□□ -1.65
NMD4YLR363C SWI3P32591 825 aa4.75□□□□□ -1.65
NMD4YLR363C YKL097CP34245 136 aa4.75□□□□□ -1.65
NMD4YLR363C YNK1P36010 153 aaKnown RBP4.75□□□□□ -1.65
NMD4YLR363C YKL023WP36103 277 aaKnown RBP4.75□□□□□ -1.65
NMD4YLR363C RPL4BP49626 362 aaKnown RBP4.75□□□□□ -1.65
NMD4YLR363C HSH155P49955 971 aaKnown RBP4.75□□□□□ -1.65
NMD4YLR363C SMM1P53720 384 aaKnown RBP4.75□□□□□ -1.65
NMD4YLR363C SUB1P54000 292 aaKnown RBP4.75□□□□□ -1.65
NMD4YLR363C VPS20Q04272 221 aa4.75□□□□□ -1.65
NMD4YLR363C BUD22Q04347 519 aaKnown RBP4.75□□□□□ -1.65
NMD4YLR363C DON1Q05610 365 aa4.75□□□□□ -1.65
NMD4YLR363C DIC1Q06143 298 aa4.75□□□□□ -1.65
NMD4YLR363C YDL057WQ07379 328 aa4.75□□□□□ -1.65
NMD4YLR363C NSE1Q07913 336 aa4.75□□□□□ -1.65
NMD4YLR363C YPL272CQ08984 517 aa4.75□□□□□ -1.65
NMD4YLR363C MF(ALPHA)1P01149 165 aa4.74□□□□□ -1.65
NMD4YLR363C ARD1P07347 238 aaPredicted RBP4.74□□□□□ -1.65
NMD4YLR363C BOS1P25385 244 aa4.74□□□□□ -1.65
NMD4YLR363C SGF29P25554 259 aa4.74□□□□□ -1.65
NMD4YLR363C RDS1P25611 832 aa4.74□□□□□ -1.65
NMD4YLR363C YIH1P25637 258 aa4.74□□□□□ -1.65
NMD4YLR363C MCM10P32354 571 aa4.74□□□□□ -1.65
NMD4YLR363C MUD1P32605 298 aaKnown RBP4.74□□□□□ -1.65
NMD4YLR363C VPS17P32913 551 aa4.74□□□□□ -1.65
NMD4YLR363C YBL055CP34220 418 aaPredicted RBP4.74□□□□□ -1.65
NMD4YLR363C RFT1P38206 574 aaPredicted RBP4.74□□□□□ -1.65
NMD4YLR363C ICS2P38284 255 aa4.74□□□□□ -1.65
NMD4YLR363C DSN1P40568 576 aa4.74□□□□□ -1.65
NMD4YLR363C SAM50P53969 484 aa4.74□□□□□ -1.65
NMD4YLR363C SLG1P54867 378 aa4.74□□□□□ -1.65
NMD4YLR363C THI20Q08224 551 aa4.74□□□□□ -1.65
NMD4YLR363C MED1Q12321 566 aa4.74□□□□□ -1.65
NMD4YLR363C MTF1P14908 341 aaKnown RBP4.73□□□□□ -1.65
NMD4YLR363C KGD1P20967 1014 aaKnown RBP4.73□□□□□ -1.65
NMD4YLR363C IMG1P25626 169 aa4.73□□□□□ -1.65
NMD4YLR363C SSE2P32590 693 aaKnown RBP4.73□□□□□ -1.65
NMD4YLR363C DHH1P39517 506 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms