RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W TOF1P53840 1238 aa3.13□□□□□ -1.91
VPS38YLR360W MRP51Q02950 344 aa3.13□□□□□ -1.91
VPS38YLR360W PAL1Q05518 499 aaKnown RBP3.13□□□□□ -1.91
VPS38YLR360W VTA1Q06263 330 aa3.13□□□□□ -1.91
VPS38YLR360W ERV2Q12284 196 aa3.13□□□□□ -1.91
VPS38YLR360W GPH1P06738 902 aaKnown RBP3.12□□□□□ -1.91
VPS38YLR360W LDB16P25587 256 aa3.12□□□□□ -1.91
VPS38YLR360W ECM25P32525 599 aa3.12□□□□□ -1.91
VPS38YLR360W YEL045CP32616 141 aa3.12□□□□□ -1.91
VPS38YLR360W SWE1P32944 819 aa3.12□□□□□ -1.91
VPS38YLR360W SDH3P33421 198 aa3.12□□□□□ -1.91
VPS38YLR360W SAS3P34218 831 aa3.12□□□□□ -1.91
VPS38YLR360W HCS1P34243 683 aa3.12□□□□□ -1.91
VPS38YLR360W MIX23P38162 196 aa3.12□□□□□ -1.91
VPS38YLR360W PTH1P38876 190 aaKnown RBP3.12□□□□□ -1.91
VPS38YLR360W NAB3P38996 802 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
VPS38YLR360W MST28P39552 234 aa3.12□□□□□ -1.91
VPS38YLR360W ECM27P47144 725 aa3.12□□□□□ -1.91
VPS38YLR360W SSN8P47821 323 aa3.12□□□□□ -1.91
VPS38YLR360W SHE10P53075 577 aa3.12□□□□□ -1.91
VPS38YLR360W TIM18Q08749 192 aa3.12□□□□□ -1.91
VPS38YLR360W YPR022CQ12139 1133 aa3.12□□□□□ -1.91
VPS38YLR360W RTN2Q12443 393 aa3.12□□□□□ -1.91
VPS38YLR360W SPS22P25380 463 aa3.11□□□□□ -1.91
VPS38YLR360W STB6P36085 766 aa3.11□□□□□ -1.91
VPS38YLR360W MRPL4P36517 319 aa3.11□□□□□ -1.91
VPS38YLR360W YGR210CP42942 411 aa3.11□□□□□ -1.91
VPS38YLR360W BTN2P53286 410 aa3.11□□□□□ -1.91
VPS38YLR360W FRE4P53746 719 aa3.11□□□□□ -1.91
VPS38YLR360W MDM1Q01846 1127 aa3.11□□□□□ -1.91
VPS38YLR360W ADD37Q03233 198 aa3.11□□□□□ -1.91
VPS38YLR360W TAF11Q04226 346 aa3.11□□□□□ -1.91
VPS38YLR360W TMS1Q12116 473 aa3.11□□□□□ -1.91
VPS38YLR360W PKH2Q12236 1081 aaKnown RBP3.11□□□□□ -1.91
VPS38YLR360W RTP1Q12751 981 aa3.11□□□□□ -1.91
VPS38YLR360W YOL159C-AQ3E769 90 aa3.11□□□□□ -1.91
VPS38YLR360W CLB3P24870 427 aa3.1□□□□□ -1.91
VPS38YLR360W TIP1P27654 210 aaPredicted RBP3.1□□□□□ -1.91
VPS38YLR360W YHR054CP38780 354 aa3.1□□□□□ -1.91
VPS38YLR360W DLD2P46681 530 aaKnown RBP3.1□□□□□ -1.91
VPS38YLR360W RPA49Q01080 415 aaPredicted RBP3.1□□□□□ -1.91
VPS38YLR360W SYF1Q04048 859 aaPredicted RBP3.1□□□□□ -1.91
VPS38YLR360W YLR287CQ05881 355 aa3.1□□□□□ -1.91
VPS38YLR360W RAD61Q99359 647 aa3.1□□□□□ -1.91
VPS38YLR360W HIS4P00815 799 aaKnown RBP3.09□□□□□ -1.91
VPS38YLR360W RIP1P08067 215 aa3.09□□□□□ -1.91
VPS38YLR360W CLN3P13365 580 aa3.09□□□□□ -1.91
VPS38YLR360W SRV2P17555 526 aaKnown RBP3.09□□□□□ -1.91
VPS38YLR360W SLY1P22213 666 aa3.09□□□□□ -1.91
VPS38YLR360W ERG3P32353 365 aa3.09□□□□□ -1.91
VPS38YLR360W ARA1P38115 344 aa3.09□□□□□ -1.91
VPS38YLR360W MTC6P38849 526 aa3.09□□□□□ -1.91
VPS38YLR360W LYS1P38998 373 aaRIP-Chip data3.09□□□□□ -1.91not detected
VPS38YLR360W PRE5P40302 234 aaKnown RBP3.09□□□□□ -1.91
VPS38YLR360W PRM5P40476 318 aa3.09□□□□□ -1.91
VPS38YLR360W SAS2P40963 338 aa3.09□□□□□ -1.91
VPS38YLR360W FMS1P50264 508 aa3.09□□□□□ -1.91
VPS38YLR360W PPM1Q04081 328 aa3.09□□□□□ -1.91
VPS38YLR360W MRPL35Q06678 367 aa3.09□□□□□ -1.91
VPS38YLR360W TEF1P02994 458 aaKnown RBP3.08□□□□□ -1.92
VPS38YLR360W CDC31P06704 161 aaKnown RBP3.08□□□□□ -1.92
VPS38YLR360W ARO2P28777 376 aaKnown RBP3.08□□□□□ -1.92
VPS38YLR360W ITR1P30605 584 aa3.08□□□□□ -1.92
VPS38YLR360W PIM1P36775 1133 aa3.08□□□□□ -1.92
VPS38YLR360W FAA2P39518 744 aa3.08□□□□□ -1.92
VPS38YLR360W GPD2P41911 440 aaKnown RBP3.08□□□□□ -1.92
VPS38YLR360W RPS0BP46654 252 aaKnown RBP3.08□□□□□ -1.92
VPS38YLR360W HMS2P47175 358 aa3.08□□□□□ -1.92
VPS38YLR360W HXT11P54862 567 aa3.08□□□□□ -1.92
VPS38YLR360W RRG7Q08774 242 aaPredicted RBP3.08□□□□□ -1.92
VPS38YLR360W ARG4P04076 463 aaPredicted RBP3.07□□□□□ -1.92
VPS38YLR360W RML2P32611 393 aa3.07□□□□□ -1.92
VPS38YLR360W SWD3P38123 315 aa3.07□□□□□ -1.92
VPS38YLR360W NTC20P38302 140 aaPredicted RBP3.07□□□□□ -1.92
VPS38YLR360W REE1P40893 198 aa3.07□□□□□ -1.92
VPS38YLR360W SDT1P53078 280 aa3.07□□□□□ -1.92
VPS38YLR360W VPS72Q03388 795 aa3.07□□□□□ -1.92
VPS38YLR360W RRP45Q05636 305 aaKnown RBP3.07□□□□□ -1.92
VPS38YLR360W HRI1Q05905 244 aaKnown RBP3.07□□□□□ -1.92
VPS38YLR360W REX4Q08237 289 aa3.07□□□□□ -1.92
VPS38YLR360W TMC1Q08422 150 aaPredicted RBP3.07□□□□□ -1.92
VPS38YLR360W SNX3Q08826 162 aaKnown RBP3.07□□□□□ -1.92
VPS38YLR360W HRT3Q12347 344 aa3.07□□□□□ -1.92
VPS38YLR360W SUP35P05453 685 aaKnown RBP3.06□□□□□ -1.92
VPS38YLR360W SEC63P14906 663 aa3.06□□□□□ -1.92
VPS38YLR360W PET123P17558 318 aa3.06□□□□□ -1.92
VPS38YLR360W CLC1P17891 233 aa3.06□□□□□ -1.92
VPS38YLR360W DAL2P25335 343 aa3.06□□□□□ -1.92
VPS38YLR360W RHB1P25378 209 aa3.06□□□□□ -1.92
VPS38YLR360W MNS1P32906 549 aa3.06□□□□□ -1.92
VPS38YLR360W YJR011CP47086 261 aaPredicted RBP3.06□□□□□ -1.92
VPS38YLR360W YNR048WP53740 393 aa3.06□□□□□ -1.92
VPS38YLR360W YMR181CQ03231 154 aa3.06□□□□□ -1.92
VPS38YLR360W YMR155WQ03795 547 aa3.06□□□□□ -1.92
VPS38YLR360W HSP42Q12329 375 aa3.06□□□□□ -1.92
VPS38YLR360W YRF1-4O13559 1382 aa3.05□□□□□ -1.92
VPS38YLR360W ADH2P00331 348 aaKnown RBP3.05□□□□□ -1.92
VPS38YLR360W FUR1P18562 216 aaKnown RBP3.05□□□□□ -1.92
VPS38YLR360W BEM1P29366 551 aa3.05□□□□□ -1.92
VPS38YLR360W SIN4P32259 974 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms