RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C IDH2P28241 369 aaKnown RBP3.93□□□□□ -1.78
USB1YLR132C GYP6P32806 458 aa3.93□□□□□ -1.78
USB1YLR132C MSN2P33748 704 aa3.93□□□□□ -1.78
USB1YLR132C SAS3P34218 831 aa3.93□□□□□ -1.78
USB1YLR132C ELP2P42935 788 aa3.93□□□□□ -1.78
USB1YLR132C GUF1P46943 645 aa3.93□□□□□ -1.78
USB1YLR132C YGR149WP48236 432 aa3.93□□□□□ -1.78
USB1YLR132C GIS2P53849 153 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
USB1YLR132C VPS74Q06385 345 aa3.93□□□□□ -1.78
USB1YLR132C PDX1P16451 410 aa3.92□□□□□ -1.78
USB1YLR132C PXA2P34230 853 aa3.92□□□□□ -1.78
USB1YLR132C RSM22P36056 628 aa3.92□□□□□ -1.78
USB1YLR132C NTC20P38302 140 aaPredicted RBP3.92□□□□□ -1.78
USB1YLR132C RTT107P38850 1070 aa3.92□□□□□ -1.78
USB1YLR132C BUD27P43573 796 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
USB1YLR132C SCD6P45978 349 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
USB1YLR132C IKS1P47042 667 aa3.92□□□□□ -1.78
USB1YLR132C FMS1P50264 508 aa3.92□□□□□ -1.78
USB1YLR132C YGL108CP53139 140 aa3.92□□□□□ -1.78
USB1YLR132C IRC15Q02733 499 aa3.92□□□□□ -1.78
USB1YLR132C SLD5Q03406 294 aa3.92□□□□□ -1.78
USB1YLR132C RBS1Q05672 457 aaKnown RBP3.92□□□□□ -1.78
USB1YLR132C MRPL51Q06090 140 aaPredicted RBP3.92□□□□□ -1.78
USB1YLR132C PHO92Q06390 306 aa3.92□□□□□ -1.78
USB1YLR132C PGA3Q12746 312 aaKnown RBP3.92□□□□□ -1.78
USB1YLR132C GSC2P40989 1895 aa3.92□□□□□ -1.78
USB1YLR132C SUC2P00724 532 aa3.91□□□□□ -1.78
USB1YLR132C LEU4P06208 619 aaKnown RBP3.91□□□□□ -1.78
USB1YLR132C GLK1P17709 500 aaKnown RBP3.91□□□□□ -1.78
USB1YLR132C PTR2P32901 601 aa3.91□□□□□ -1.78
USB1YLR132C YER130CP39959 443 aa3.91□□□□□ -1.78
USB1YLR132C YND1P40009 630 aa3.91□□□□□ -1.78
USB1YLR132C YJL070CP40361 888 aa3.91□□□□□ -1.78
USB1YLR132C NCS2P53923 493 aaPredicted RBP3.91□□□□□ -1.78
USB1YLR132C RBA50Q04418 439 aa3.91□□□□□ -1.78
USB1YLR132C RRP45Q05636 305 aaKnown RBP3.91□□□□□ -1.78
USB1YLR132C YTH1Q06102 208 aaPredicted RBP3.91□□□□□ -1.78
USB1YLR132C YDL009CQ12210 107 aa3.91□□□□□ -1.78
USB1YLR132C ISA2Q12425 185 aa3.91□□□□□ -1.78
USB1YLR132C YOL159C-AQ3E769 90 aa3.91□□□□□ -1.78
USB1YLR132C MES1P00958 751 aaKnown RBP3.9□□□□□ -1.79
USB1YLR132C GPH1P06738 902 aaKnown RBP3.9□□□□□ -1.79
USB1YLR132C PMS1P14242 873 aa3.9□□□□□ -1.79
USB1YLR132C MTF1P14908 341 aaKnown RBP3.9□□□□□ -1.79
USB1YLR132C PPH22P23595 377 aa3.9□□□□□ -1.79
USB1YLR132C YCR051WP25631 222 aa3.9□□□□□ -1.79
USB1YLR132C PPZ1P26570 692 aa3.9□□□□□ -1.79
USB1YLR132C HXT3P32466 567 aaKnown RBP3.9□□□□□ -1.79
USB1YLR132C TUL1P36096 758 aa3.9□□□□□ -1.79
USB1YLR132C ARA1P38115 344 aa3.9□□□□□ -1.79
USB1YLR132C LSM5P40089 93 aaKnown RBP3.9□□□□□ -1.79
USB1YLR132C OGG1P53397 376 aaPredicted RBP3.9□□□□□ -1.79
USB1YLR132C CRZ1P53968 678 aa3.9□□□□□ -1.79
USB1YLR132C SOV1Q04748 898 aa3.9□□□□□ -1.79
USB1YLR132C SYO1Q07395 620 aa3.9□□□□□ -1.79
USB1YLR132C HSP42Q12329 375 aa3.9□□□□□ -1.79
USB1YLR132C CYB2P00175 591 aa3.89□□□□□ -1.79
USB1YLR132C FUN19P28003 413 aaPredicted RBP3.89□□□□□ -1.79
USB1YLR132C PRO3P32263 286 aaKnown RBP3.89□□□□□ -1.79
USB1YLR132C TFB1P32776 642 aa3.89□□□□□ -1.79
USB1YLR132C SIP2P34164 415 aaKnown RBP3.89□□□□□ -1.79
USB1YLR132C YGL138CP53122 345 aa3.89□□□□□ -1.79
USB1YLR132C DRN1P53255 507 aaKnown RBP3.89□□□□□ -1.79
USB1YLR132C MDG1P53885 366 aa3.89□□□□□ -1.79
USB1YLR132C SLG1P54867 378 aa3.89□□□□□ -1.79
USB1YLR132C RMT2Q03305 412 aa3.89□□□□□ -1.79
USB1YLR132C TAP42Q04372 366 aa3.89□□□□□ -1.79
USB1YLR132C CFT2Q12102 859 aaPredicted RBP3.89□□□□□ -1.79
USB1YLR132C CDC23P16522 626 aa3.88□□□□□ -1.79
USB1YLR132C SGV1P23293 657 aaKnown RBP3.88□□□□□ -1.79
USB1YLR132C RPC53P25441 422 aa3.88□□□□□ -1.79
USB1YLR132C BUD14P27637 709 aa3.88□□□□□ -1.79
USB1YLR132C HSP104P31539 908 aaKnown RBP3.88□□□□□ -1.79
USB1YLR132C FRE1P32791 686 aa3.88□□□□□ -1.79
USB1YLR132C VHC1P38329 1120 aa3.88□□□□□ -1.79
USB1YLR132C SRP72P38688 640 aaKnown RBP3.88□□□□□ -1.79
USB1YLR132C VPS52P39904 641 aa3.88□□□□□ -1.79
USB1YLR132C YFR016CP43597 1233 aaKnown RBP3.88□□□□□ -1.79
USB1YLR132C DSL1P53847 754 aa3.88□□□□□ -1.79
USB1YLR132C RPA49Q01080 415 aaPredicted RBP3.88□□□□□ -1.79
USB1YLR132C KAP120Q02932 1032 aa3.88□□□□□ -1.79
USB1YLR132C DON1Q05610 365 aa3.88□□□□□ -1.79
USB1YLR132C BNA5Q05979 453 aa3.88□□□□□ -1.79
USB1YLR132C DIB1Q06819 143 aaPredicted RBP3.88□□□□□ -1.79
USB1YLR132C ERP4Q12450 207 aa3.88□□□□□ -1.79
USB1YLR132C SMC6Q12749 1114 aa3.88□□□□□ -1.79
USB1YLR132C PHO2P07269 559 aa3.87□□□□□ -1.79
USB1YLR132C ATP10P18496 279 aa3.87□□□□□ -1.79
USB1YLR132C ATP11P32453 318 aa3.87□□□□□ -1.79
USB1YLR132C NDC1P32500 655 aa3.87□□□□□ -1.79
USB1YLR132C YME2P32843 850 aa3.87□□□□□ -1.79
USB1YLR132C STB6P36085 766 aa3.87□□□□□ -1.79
USB1YLR132C SYG1P40528 902 aa3.87□□□□□ -1.79
USB1YLR132C YGL260WP53056 76 aa3.87□□□□□ -1.79
USB1YLR132C YGR117CP53270 476 aa3.87□□□□□ -1.79
USB1YLR132C YMR087WQ04299 284 aa3.87□□□□□ -1.79
USB1YLR132C DAP1Q12091 152 aa3.87□□□□□ -1.79
USB1YLR132C TIP41Q12199 356 aa3.87□□□□□ -1.79
USB1YLR132C AFI1Q99222 893 aa3.87□□□□□ -1.79
USB1YLR132C YML002WP0CF17 737 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms