RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C SPT3P06844 337 aa10.7□□□□□ -0.7
SPT8YLR055C RSR1P13856 272 aa10.7□□□□□ -0.7
SPT8YLR055C UTP30P36144 274 aaKnown RBP10.7□□□□□ -0.7
SPT8YLR055C SEA4P38164 1038 aa10.7□□□□□ -0.7
SPT8YLR055C FMP23P38231 175 aa10.7□□□□□ -0.7
SPT8YLR055C GAB1P41733 394 aa10.7□□□□□ -0.7
SPT8YLR055C AIM14P53109 570 aa10.7□□□□□ -0.7
SPT8YLR055C FLC3P53121 802 aa10.7□□□□□ -0.7
SPT8YLR055C MRPL13Q02204 264 aa10.7□□□□□ -0.7
SPT8YLR055C SMA1Q02651 245 aa10.7□□□□□ -0.7
SPT8YLR055C YLL007CQ07799 665 aa10.7□□□□□ -0.7
SPT8YLR055C RBD2Q12270 262 aa10.7□□□□□ -0.7
SPT8YLR055C FAB1P34756 2278 aa10.69□□□□□ -0.7
SPT8YLR055C DAP2P18962 818 aa10.69□□□□□ -0.7
SPT8YLR055C DBF2P22204 572 aa10.69□□□□□ -0.7
SPT8YLR055C YCL049CP25577 312 aa10.69□□□□□ -0.7
SPT8YLR055C MEP2P41948 499 aa10.69□□□□□ -0.7
SPT8YLR055C PET130P47065 347 aa10.69□□□□□ -0.7
SPT8YLR055C CPR8P53728 308 aa10.69□□□□□ -0.7
SPT8YLR055C PEX13P80667 386 aa10.69□□□□□ -0.7
SPT8YLR055C DBP9Q06218 594 aaKnown RBP10.69□□□□□ -0.7
SPT8YLR055C GRS2Q06817 618 aa10.69□□□□□ -0.7
SPT8YLR055C CLP1Q08685 445 aaPredicted RBP10.69□□□□□ -0.7
SPT8YLR055C SNF8Q12483 233 aa10.69□□□□□ -0.7
SPT8YLR055C MSF1P08425 469 aa10.68□□□□□ -0.7
SPT8YLR055C FPR1P20081 114 aaKnown RBP10.68□□□□□ -0.7
SPT8YLR055C DCC1P25559 380 aa10.68□□□□□ -0.7
SPT8YLR055C DDI1P40087 428 aa10.68□□□□□ -0.7
SPT8YLR055C OSW5P40219 148 aa10.68□□□□□ -0.7
SPT8YLR055C ALG8P40351 577 aa10.68□□□□□ -0.7
SPT8YLR055C ALR2P43553 858 aa10.68□□□□□ -0.7
SPT8YLR055C FET5P43561 622 aa10.68□□□□□ -0.7
SPT8YLR055C RSM7P47150 247 aa10.68□□□□□ -0.7
SPT8YLR055C TIS11P47977 285 aa10.68□□□□□ -0.7
SPT8YLR055C NUP49Q02199 472 aa10.68□□□□□ -0.7
SPT8YLR055C YPS7Q06325 596 aa10.68□□□□□ -0.7
SPT8YLR055C PER33Q12144 273 aa10.68□□□□□ -0.7
SPT8YLR055C UBR1P19812 1950 aa10.68□□□□□ -0.7
SPT8YLR055C TY4B-PA0A0B7P3V8 1104 aa10.68□□□□□ -0.7
SPT8YLR055C SCH9P11792 824 aaKnown RBP10.68□□□□□ -0.7
SPT8YLR055C CLN2P20438 545 aa10.68□□□□□ -0.7
SPT8YLR055C RBK1P25332 333 aa10.68□□□□□ -0.7
SPT8YLR055C AAR2P32357 355 aaPredicted RBP10.68□□□□□ -0.7
SPT8YLR055C LIP5P32875 414 aa10.68□□□□□ -0.7
SPT8YLR055C SDH3P33421 198 aa10.68□□□□□ -0.7
SPT8YLR055C CTF13P35203 478 aa10.68□□□□□ -0.7
SPT8YLR055C SOK1P40317 901 aa10.68□□□□□ -0.7
SPT8YLR055C BUD13P46947 266 aaPredicted RBP10.68□□□□□ -0.7
SPT8YLR055C SPC105P53148 917 aa10.68□□□□□ -0.7
SPT8YLR055C RRN5Q02983 363 aa10.68□□□□□ -0.7
SPT8YLR055C MAK3Q03503 176 aa10.68□□□□□ -0.7
SPT8YLR055C ACF2Q12168 779 aa10.68□□□□□ -0.7
SPT8YLR055C YLR126CQ12288 251 aa10.68□□□□□ -0.7
SPT8YLR055C PXA2P34230 853 aa10.67□□□□□ -0.7
SPT8YLR055C MUM2P38236 366 aa10.67□□□□□ -0.7
SPT8YLR055C YHK8P38776 514 aa10.67□□□□□ -0.7
SPT8YLR055C PAN6P40459 309 aa10.67□□□□□ -0.7
SPT8YLR055C RIM21P48565 533 aa10.67□□□□□ -0.7
SPT8YLR055C ROM1P53046 1155 aa10.67□□□□□ -0.7
SPT8YLR055C ART5P53244 586 aaKnown RBP10.67□□□□□ -0.7
SPT8YLR055C PRM1P53835 661 aa10.67□□□□□ -0.7
SPT8YLR055C YPR084WQ06821 456 aa10.67□□□□□ -0.7
SPT8YLR055C HRK1Q08732 759 aaKnown RBP10.67□□□□□ -0.7
SPT8YLR055C SMF3Q12078 473 aaPredicted RBP10.67□□□□□ -0.7
SPT8YLR055C YJU3P28321 313 aa10.66□□□□□ -0.7
SPT8YLR055C ARO7P32178 256 aa10.66□□□□□ -0.7
SPT8YLR055C IPI1P38803 334 aaPredicted RBP10.66□□□□□ -0.7
SPT8YLR055C YHR219WP38900 624 aa10.66□□□□□ -0.7
SPT8YLR055C PAC11P40960 533 aa10.66□□□□□ -0.7
SPT8YLR055C TES1P41903 349 aaKnown RBP10.66□□□□□ -0.7
SPT8YLR055C YJR098CP47139 656 aa10.66□□□□□ -0.7
SPT8YLR055C TOM22P49334 152 aa10.66□□□□□ -0.7
SPT8YLR055C BIO3P50277 480 aa10.66□□□□□ -0.7
SPT8YLR055C NQM1P53228 333 aaPredicted RBP10.66□□□□□ -0.7
SPT8YLR055C IDP3P53982 420 aaKnown RBP10.66□□□□□ -0.7
SPT8YLR055C RPL34AP87262 121 aaPredicted RBP10.66□□□□□ -0.7
SPT8YLR055C YLR345WQ06137 509 aa10.66□□□□□ -0.7
SPT8YLR055C MCA1Q08601 432 aa10.66□□□□□ -0.7
SPT8YLR055C YDL199CQ12407 687 aa10.66□□□□□ -0.7
SPT8YLR055C CHA1P25379 360 aaKnown RBP10.65□□□□□ -0.7
SPT8YLR055C GUT1P32190 709 aa10.65□□□□□ -0.7
SPT8YLR055C GND1P38720 489 aaKnown RBP10.65□□□□□ -0.7
SPT8YLR055C MIT1P40002 666 aa10.65□□□□□ -0.7
SPT8YLR055C LSB3P43603 459 aaKnown RBP10.65□□□□□ -0.7
SPT8YLR055C YPR114WQ06107 315 aa10.65□□□□□ -0.7
SPT8YLR055C LEU1P07264 779 aaKnown RBP10.65□□□□□ -0.71
SPT8YLR055C PHO4P07270 312 aaKnown RBP10.65□□□□□ -0.71
SPT8YLR055C CDC4P07834 779 aa10.65□□□□□ -0.71
SPT8YLR055C GAL3P13045 520 aa10.65□□□□□ -0.71
SPT8YLR055C ALY1P36117 915 aa10.65□□□□□ -0.71
SPT8YLR055C LDB7P38210 180 aa10.65□□□□□ -0.71
SPT8YLR055C MPT5P39016 859 aaKnown RBP RIP-Chip data10.65□□□□□ -0.71 RIP-Chip
SPT8YLR055C SER2P42941 309 aa10.65□□□□□ -0.71
SPT8YLR055C SIP4P46954 829 aa10.65□□□□□ -0.71
SPT8YLR055C EMC4P53073 190 aa10.65□□□□□ -0.71
SPT8YLR055C PRM8P53174 237 aa10.65□□□□□ -0.71
SPT8YLR055C YDR132CQ03900 495 aa10.65□□□□□ -0.71
SPT8YLR055C MCP2Q06567 569 aa10.65□□□□□ -0.71
SPT8YLR055C SYO1Q07395 620 aa10.65□□□□□ -0.71
SPT8YLR055C YOL131WQ08270 108 aa10.65□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms