RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeast

Gene LSB1, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSB1	YGR136W	YGR266W	P53326	701 aa		4.11	□□□□□ -1.75
LSB1	YGR136W	YNR071C	P53757	342 aa		4.11	□□□□□ -1.75
LSB1	YGR136W	RPM2	Q02773	1202 aa		4.11	□□□□□ -1.75
LSB1	YGR136W	INA17	Q02888	182 aa		4.11	□□□□□ -1.75
LSB1	YGR136W	FDC1	Q03034	503 aa		4.11	□□□□□ -1.75
LSB1	YGR136W	RLI1	Q03195	608 aa	Known RBP	4.11	□□□□□ -1.75
LSB1	YGR136W	DML1	Q03652	475 aa		4.11	□□□□□ -1.75
LSB1	YGR136W	ARA2	Q04212	335 aa		4.11	□□□□□ -1.75
LSB1	YGR136W	TAF11	Q04226	346 aa		4.11	□□□□□ -1.75
LSB1	YGR136W	TMN2	Q04562	672 aa		4.11	□□□□□ -1.75
LSB1	YGR136W	CDC123	Q05791	360 aa		4.11	□□□□□ -1.75
LSB1	YGR136W	VPS36	Q06696	566 aa		4.11	□□□□□ -1.75
LSB1	YGR136W	RPS10A	Q08745	105 aa	Predicted RBP	4.11	□□□□□ -1.75
LSB1	YGR136W	YOR387C	Q08910	206 aa		4.11	□□□□□ -1.75
LSB1	YGR136W	RSA1	Q08932	381 aa		4.11	□□□□□ -1.75
LSB1	YGR136W	DIN7	Q12086	430 aa		4.11	□□□□□ -1.75
LSB1	YGR136W	RTK1	Q12100	620 aa	Predicted RBP	4.11	□□□□□ -1.75
LSB1	YGR136W	RUP1	Q12242	671 aa		4.11	□□□□□ -1.75
LSB1	YGR136W	DBP10	Q12389	995 aa	Known RBP	4.11	□□□□□ -1.75
LSB1	YGR136W	NOT5	Q12514	560 aa	Predicted RBP	4.11	□□□□□ -1.75
LSB1	YGR136W	HRP1	Q99383	534 aa	Known RBP	4.11	□□□□□ -1.75
LSB1	YGR136W	ACC1	Q00955	2233 aa	Known RBP	4.11	□□□□□ -1.75
LSB1	YGR136W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
LSB1	YGR136W	PRP28	P23394	588 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	SPS22	P25380	463 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	ADY2	P25613	283 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	YCR016W	P25617	290 aa	Known RBP	4.1	□□□□□ -1.75
LSB1	YGR136W	HRR25	P29295	494 aa	Known RBP	4.1	□□□□□ -1.75
LSB1	YGR136W	PHA2	P32452	334 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	MTC7	P32633	139 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	BEM3	P32873	1128 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	CYM1	P32898	989 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	SGE1	P33335	543 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	AST1	P35183	429 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	RCN1	P36054	211 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	RRN3	P36070	627 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	RFC3	P38629	340 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	ARP1	P38696	384 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	VMA22	P38784	181 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	EDC3	P39998	551 aa	Known RBP	4.1	□□□□□ -1.75
LSB1	YGR136W	PEP8	P40335	379 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	ALG5	P40350	334 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	ATM1	P40416	690 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	PFK26	P40433	827 aa	Known RBP	4.1	□□□□□ -1.75
LSB1	YGR136W	IMA5	P40884	581 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	SMK1	P41808	388 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	ROK1	P45818	564 aa	Predicted RBP	4.1	□□□□□ -1.75
LSB1	YGR136W	FAR3	P46671	204 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	FMP33	P46998	180 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	YNR061C	P53747	219 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	TMA20	P89886	181 aa	Predicted RBP	4.1	□□□□□ -1.75
LSB1	YGR136W	MRPL13	Q02204	264 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	SRL4	Q03085	281 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	PIR3	Q03180	325 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	RSM28	Q03430	361 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	FIN1	Q03898	291 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	BUD22	Q04347	519 aa	Known RBP	4.1	□□□□□ -1.75
LSB1	YGR136W	MCP2	Q06567	569 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	UIP4	Q08926	304 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	RKM1	Q08961	583 aa	Predicted RBP	4.1	□□□□□ -1.75
LSB1	YGR136W	BBP1	Q12365	385 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	RGS2	Q99188	309 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	IRA2	P19158	3079 aa		4.1	□□□□□ -1.75
LSB1	YGR136W	RPL24A	P04449	155 aa	Known RBP	4.09	□□□□□ -1.75
LSB1	YGR136W	NMT1	P14743	455 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	SEN2	P16658	377 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	ARF2	P19146	181 aa	Known RBP	4.09	□□□□□ -1.75
LSB1	YGR136W	EXO70	P19658	623 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	KIN3	P22209	435 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	UBA1	P22515	1024 aa	Known RBP	4.09	□□□□□ -1.75
LSB1	YGR136W	GFD2	P25370	566 aa	Known RBP	4.09	□□□□□ -1.75
LSB1	YGR136W	HCS1	P34243	683 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	MUM2	P38236	366 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	FMO1	P38866	432 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	HEM14	P40012	539 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	PIG2	P40187	538 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	CAB2	P40506	365 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	YFL012W	P43580	148 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	DLD2	P46681	530 aa	Known RBP	4.09	□□□□□ -1.75
LSB1	YGR136W	PRP24	P49960	444 aa	Known RBP	4.09	□□□□□ -1.75
LSB1	YGR136W	IMA1	P53051	589 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	TRM112	P53738	135 aa	Predicted RBP	4.09	□□□□□ -1.75
LSB1	YGR136W	EFM6	P53970	246 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	YPL014W	Q02606	381 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	LGE1	Q02796	332 aa	Known RBP	4.09	□□□□□ -1.75
LSB1	YGR136W	YMR209C	Q03648	457 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	FMN1	Q03778	218 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	TVP15	Q03860	143 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	DLT1	Q04216	342 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	RTN1	Q04947	295 aa	Known RBP	4.09	□□□□□ -1.75
LSB1	YGR136W	ARP9	Q05123	467 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	TMA10	Q06177	86 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	YPR172W	Q06608	200 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	RIP-Chip
LSB1	YGR136W	LCB4	Q12246	624 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	LDB17	Q12342	491 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	LSO2	Q3E772	92 aa	Known RBP	4.09	□□□□□ -1.75
LSB1	YGR136W	AFI1	Q99222	893 aa		4.09	□□□□□ -1.75
LSB1	YGR136W	MEX67	Q99257	599 aa	Known RBP	4.09	□□□□□ -1.75
LSB1	YGR136W	SEC12	P11655	471 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms