RNA–Protein interactions for RNA: YFL048C

EMP47, Transcript of Integral membrane component of ER-derived COPII-coated vesicles, yeast

Gene EMP47, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EMP47	YFL048C	KSS1	P14681	368 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	NSP1	P14907	823 aa	Known RBP	4.15	□□□□□ -1.75
EMP47	YFL048C	FRS1	P15624	595 aa	Known RBP	4.15	□□□□□ -1.75
EMP47	YFL048C	MET16	P18408	261 aa	Predicted RBP	4.15	□□□□□ -1.75
EMP47	YFL048C	FAR1	P21268	830 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	FEN2	P25621	512 aa	Known RBP	4.15	□□□□□ -1.75
EMP47	YFL048C	IMG2	P25642	146 aa	Predicted RBP	4.15	□□□□□ -1.75
EMP47	YFL048C	YCR090C	P25654	182 aa	Known RBP	4.15	□□□□□ -1.75
EMP47	YFL048C	UBC8	P28263	218 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	BEM1	P29366	551 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	PAH1	P32567	862 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	MRS6	P32864	603 aa	Known RBP	4.15	□□□□□ -1.75
EMP47	YFL048C	IST2	P38250	946 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	KSP1	P38691	1029 aa	Known RBP	4.15	□□□□□ -1.75
EMP47	YFL048C	FAD1	P38913	306 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	YEL028W	P39989	153 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	YEL020C	P39994	560 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	IES5	P40060	125 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	YJR061W	P40355	935 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	YJL070C	P40361	888 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	SEC28	P40509	296 aa	Known RBP	4.15	□□□□□ -1.75
EMP47	YFL048C	BIT61	P47041	543 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	YJL055W	P47044	245 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	IMA1	P53051	589 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	RRT6	P53117	311 aa	Predicted RBP	4.15	□□□□□ -1.75
EMP47	YFL048C	YGR151C	P53287	111 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	YNL095C	P53932	642 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	CEG1	Q01159	459 aa	Predicted RBP	4.15	□□□□□ -1.75
EMP47	YFL048C	ECM9	Q02202	377 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	RMI1	Q02685	241 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	RSN1	Q03516	953 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	YMR210W	Q03649	449 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	ARA2	Q04212	335 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	MGR3	Q04472	501 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	ARO10	Q06408	635 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	VPS36	Q06696	566 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	YPL191C	Q08930	360 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	DDC1	Q08949	612 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	MDY2	Q12285	212 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	APM4	Q99186	491 aa		4.15	□□□□□ -1.75
EMP47	YFL048C	COX5A	P00424	153 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	REP1	P03871	373 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	MIS1	P09440	975 aa	Known RBP	4.14	□□□□□ -1.75
EMP47	YFL048C	GCN3	P14741	305 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	YAP1	P19880	650 aa	Known RBP	4.14	□□□□□ -1.75
EMP47	YFL048C	UBA1	P22515	1024 aa	Known RBP	4.14	□□□□□ -1.75
EMP47	YFL048C	YSP3	P25036	478 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	BUB2	P26448	306 aa	Predicted RBP	4.14	□□□□□ -1.75
EMP47	YFL048C	NTH1	P32356	751 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	EMP70	P32802	667 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	RGT1	P32862	1170 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	TOM20	P35180	183 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	SPC34	P36131	295 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	YPK3	P38070	525 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	YBR241C	P38142	488 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	RFS1	P38234	210 aa	Known RBP	4.14	□□□□□ -1.75
EMP47	YFL048C	FSH1	P38777	243 aa	Known RBP	4.14	□□□□□ -1.75
EMP47	YFL048C	VMA22	P38784	181 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	THO1	P40040	218 aa	Known RBP	4.14	□□□□□ -1.75
EMP47	YFL048C	IMA5	P40884	581 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	IRC6	P43615	237 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	RTT101	P47050	842 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	MPS3	P47069	682 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	YJR096W	P47137	282 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	IMD4	P50094	524 aa	Known RBP	4.14	□□□□□ -1.75
EMP47	YFL048C	ALT2	P52892	507 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	ESF2	P53743	316 aa	Known RBP	4.14	□□□□□ -1.75
EMP47	YFL048C	DSL1	P53847	754 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	CIK1	Q01649	594 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	RLI1	Q03195	608 aa	Known RBP	4.14	□□□□□ -1.75
EMP47	YFL048C	TRS31	Q03337	283 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	GAS3	Q03655	524 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	TAF12	Q03761	539 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	PLP1	Q04004	230 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	TRM12	Q04235	462 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	VBA4	Q04602	768 aa	Known RBP	4.14	□□□□□ -1.75
EMP47	YFL048C	YDL086W	Q07505	273 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	FMP45	Q07651	309 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	PSR1	Q07800	427 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	TRE2	Q08693	809 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	CFT2	Q12102	859 aa	Predicted RBP	4.14	□□□□□ -1.75
EMP47	YFL048C	HER1	Q12276	1246 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	ATG34	Q12292	412 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	SAS5	Q99314	248 aa		4.14	□□□□□ -1.75
EMP47	YFL048C	THP2	O13539	261 aa	Known RBP	4.13	□□□□□ -1.75
EMP47	YFL048C	MF(ALPHA)1	P01149	165 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	ARG81	P05085	880 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	ARG3	P05150	338 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	MET17	P06106	444 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	TPK1	P06244	397 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	PUT2	P07275	575 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	SEC53	P07283	254 aa	Known RBP	4.13	□□□□□ -1.75
EMP47	YFL048C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
EMP47	YFL048C	TRX2	P22803	104 aa	Known RBP	4.13	□□□□□ -1.75
EMP47	YFL048C	DBR1	P24309	405 aa	Known RBP	4.13	□□□□□ -1.75
EMP47	YFL048C	CIN8	P27895	1000 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	GAC1	P28006	793 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	NTG1	P31378	399 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	NUP2	P32499	720 aa		4.13	□□□□□ -1.75
EMP47	YFL048C	PTM1	P32857	523 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms