RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DEG1	YFL001W	GDB1	Q06625	1536 aa		4.66	□□□□□ -1.66
DEG1	YFL001W	IQG1	Q12280	1495 aa		4.66	□□□□□ -1.66
DEG1	YFL001W	TY1B-A	O13527	1196 aa	Known RBP	4.66	□□□□□ -1.66
DEG1	YFL001W	YMR085W	P0CF18	432 aa		4.66	□□□□□ -1.66
DEG1	YFL001W	RHB1	P25378	209 aa		4.66	□□□□□ -1.66
DEG1	YFL001W	RPS2	P25443	254 aa	Known RBP	4.66	□□□□□ -1.66
DEG1	YFL001W	REC114	P32841	428 aa		4.66	□□□□□ -1.66
DEG1	YFL001W	PPZ2	P33329	710 aa		4.66	□□□□□ -1.66
DEG1	YFL001W	MRPL4	P36517	319 aa		4.66	□□□□□ -1.66
DEG1	YFL001W	ASC1	P38011	319 aa	Known RBP	4.66	□□□□□ -1.66
DEG1	YFL001W	EFM2	P38347	419 aa		4.66	□□□□□ -1.66
DEG1	YFL001W	YER130C	P39959	443 aa		4.66	□□□□□ -1.66
DEG1	YFL001W	YTA12	P40341	825 aa		4.66	□□□□□ -1.66
DEG1	YFL001W	CHS6	P40955	746 aa		4.66	□□□□□ -1.66
DEG1	YFL001W	ORM2	Q06144	216 aa		4.66	□□□□□ -1.66
DEG1	YFL001W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.66	□□□□□ -1.66
DEG1	YFL001W	SPO14	P36126	1683 aa		4.65	□□□□□ -1.66
DEG1	YFL001W	BUD3	P25558	1636 aa		4.65	□□□□□ -1.66
DEG1	YFL001W	SCEI	P03882	235 aa		4.65	□□□□□ -1.67
DEG1	YFL001W	TUB1	P09733	447 aa	Known RBP	4.65	□□□□□ -1.67
DEG1	YFL001W	BAR1	P12630	587 aa		4.65	□□□□□ -1.67
DEG1	YFL001W	FLO10	P36170	1169 aa		4.65	□□□□□ -1.67
DEG1	YFL001W	PFF1	P38244	976 aa		4.65	□□□□□ -1.67
DEG1	YFL001W	TOM71	P38825	639 aa	Known RBP	4.65	□□□□□ -1.67
DEG1	YFL001W	CCT2	P39076	527 aa	Known RBP	4.65	□□□□□ -1.67
DEG1	YFL001W	VRG4	P40107	337 aa		4.65	□□□□□ -1.67
DEG1	YFL001W	POP1	P41812	875 aa		4.65	□□□□□ -1.67
DEG1	YFL001W	SNO3	P43544	222 aa		4.65	□□□□□ -1.67
DEG1	YFL001W	EPL1	P43572	832 aa		4.65	□□□□□ -1.67
DEG1	YFL001W	VPS25	P47142	202 aa		4.65	□□□□□ -1.67
DEG1	YFL001W	RSC9	Q03124	581 aa		4.65	□□□□□ -1.67
DEG1	YFL001W	NDL1	Q06568	189 aa		4.65	□□□□□ -1.67
DEG1	YFL001W	YFH1	Q07540	174 aa		4.65	□□□□□ -1.67
DEG1	YFL001W	PDR10	P51533	1564 aa		4.64	□□□□□ -1.67
DEG1	YFL001W	MMS1	Q06211	1407 aa		4.64	□□□□□ -1.67
DEG1	YFL001W	IKI3	Q06706	1349 aa	Known RBP	4.64	□□□□□ -1.67
DEG1	YFL001W	COX3	P00420	269 aa		4.64	□□□□□ -1.67
DEG1	YFL001W	MES1	P00958	751 aa	Known RBP	4.64	□□□□□ -1.67
DEG1	YFL001W	FUN19	P28003	413 aa	Predicted RBP	4.64	□□□□□ -1.67
DEG1	YFL001W	PCA1	P38360	1216 aa		4.64	□□□□□ -1.67
DEG1	YFL001W	YJR011C	P47086	261 aa	Predicted RBP	4.64	□□□□□ -1.67
DEG1	YFL001W	COP1	P53622	1201 aa	Known RBP	4.64	□□□□□ -1.67
DEG1	YFL001W	PDR16	P53860	351 aa	Known RBP	4.64	□□□□□ -1.67
DEG1	YFL001W	NCS2	P53923	493 aa	Predicted RBP	4.64	□□□□□ -1.67
DEG1	YFL001W	DIC1	Q06143	298 aa		4.64	□□□□□ -1.67
DEG1	YFL001W	PML1	Q07930	204 aa	Predicted RBP	4.64	□□□□□ -1.67
DEG1	YFL001W	YDR061W	Q12298	539 aa		4.64	□□□□□ -1.67
DEG1	YFL001W	TRM3	Q07527	1436 aa		4.63	□□□□□ -1.67
DEG1	YFL001W	BNR1	P40450	1375 aa		4.63	□□□□□ -1.67
DEG1	YFL001W	PMR1	P13586	950 aa		4.63	□□□□□ -1.67
DEG1	YFL001W	GLK1	P17709	500 aa	Known RBP	4.63	□□□□□ -1.67
DEG1	YFL001W	GID7	P25569	745 aa		4.63	□□□□□ -1.67
DEG1	YFL001W	RIM1	P32445	135 aa	Known RBP	4.63	□□□□□ -1.67
DEG1	YFL001W	NIP1	P32497	812 aa	Known RBP	4.63	□□□□□ -1.67
DEG1	YFL001W	UTR4	P32626	227 aa		4.63	□□□□□ -1.67
DEG1	YFL001W	CBP4	P37267	147 aa		4.63	□□□□□ -1.67
DEG1	YFL001W	MEP1	P40260	492 aa		4.63	□□□□□ -1.67
DEG1	YFL001W	CFD1	P40558	293 aa		4.63	□□□□□ -1.67
DEG1	YFL001W	SAS2	P40963	338 aa		4.63	□□□□□ -1.67
DEG1	YFL001W	ADA2	Q02336	434 aa		4.63	□□□□□ -1.67
DEG1	YFL001W	HSP31	Q04432	237 aa		4.63	□□□□□ -1.67
DEG1	YFL001W	MGR3	Q04472	501 aa		4.63	□□□□□ -1.67
DEG1	YFL001W	YLR112W	Q12130	139 aa		4.63	□□□□□ -1.67
DEG1	YFL001W	UBX3	Q12229	455 aa		4.63	□□□□□ -1.67
DEG1	YFL001W	BNI1	P41832	1953 aa		4.62	□□□□□ -1.67
DEG1	YFL001W	ADE4	P04046	510 aa	Known RBP	4.62	□□□□□ -1.67
DEG1	YFL001W	PDE2	P06776	526 aa		4.62	□□□□□ -1.67
DEG1	YFL001W	HOM2	P13663	365 aa	Known RBP	4.62	□□□□□ -1.67
DEG1	YFL001W	YCR007C	P25354	239 aa		4.62	□□□□□ -1.67
DEG1	YFL001W	FAA1	P30624	700 aa	Known RBP	4.62	□□□□□ -1.67
DEG1	YFL001W	PHD1	P36093	366 aa		4.62	□□□□□ -1.67
DEG1	YFL001W	OLA1	P38219	394 aa	Known RBP	4.62	□□□□□ -1.67
DEG1	YFL001W	YPT11	P48559	417 aa		4.62	□□□□□ -1.67
DEG1	YFL001W	SHE4	P51534	789 aa		4.62	□□□□□ -1.67
DEG1	YFL001W	LGE1	Q02796	332 aa	Known RBP	4.62	□□□□□ -1.67
DEG1	YFL001W	EKI1	Q03764	534 aa		4.62	□□□□□ -1.67
DEG1	YFL001W	HER1	Q12276	1246 aa		4.62	□□□□□ -1.67
DEG1	YFL001W	TY3B-G	Q99315	1547 aa		4.62	□□□□□ -1.67
DEG1	YFL001W	SRB8	P25648	1427 aa		4.61	□□□□□ -1.67
DEG1	YFL001W	ERG11	P10614	530 aa		4.61	□□□□□ -1.67
DEG1	YFL001W	PPZ1	P26570	692 aa		4.61	□□□□□ -1.67
DEG1	YFL001W	RAD24	P32641	659 aa		4.61	□□□□□ -1.67
DEG1	YFL001W	RRP1	P35178	278 aa	Predicted RBP	4.61	□□□□□ -1.67
DEG1	YFL001W	SOR1	P35497	357 aa	Known RBP	4.61	□□□□□ -1.67
DEG1	YFL001W	YPK3	P38070	525 aa		4.61	□□□□□ -1.67
DEG1	YFL001W	RRN10	P38204	145 aa		4.61	□□□□□ -1.67
DEG1	YFL001W	FAU1	P40099	211 aa		4.61	□□□□□ -1.67
DEG1	YFL001W	IAH1	P41734	238 aa		4.61	□□□□□ -1.67
DEG1	YFL001W	MPP10	P47083	593 aa	Known RBP	4.61	□□□□□ -1.67
DEG1	YFL001W	CUE3	P53137	624 aa	Known RBP	4.61	□□□□□ -1.67
DEG1	YFL001W	GPI1	P53306	609 aa		4.61	□□□□□ -1.67
DEG1	YFL001W	PRO2	P54885	456 aa	Known RBP	4.61	□□□□□ -1.67
DEG1	YFL001W	ECI1	Q05871	280 aa		4.61	□□□□□ -1.67
DEG1	YFL001W	PHO92	Q06390	306 aa		4.61	□□□□□ -1.67
DEG1	YFL001W	SOR2	Q07786	357 aa		4.61	□□□□□ -1.67
DEG1	YFL001W	CRC1	Q12289	327 aa		4.61	□□□□□ -1.67
DEG1	YFL001W	ARP6	Q12509	438 aa		4.61	□□□□□ -1.67
DEG1	YFL001W	NBL1	Q3E7Y6	73 aa		4.61	□□□□□ -1.67
DEG1	YFL001W	LEU4	P06208	619 aa	Known RBP	4.6	□□□□□ -1.67
DEG1	YFL001W	ALG1	P16661	449 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms