RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C NTC20P38302 140 aaPredicted RBP1.24□□□□□ -2.21
SEC3YER008C MMS21P38632 267 aa1.24□□□□□ -2.21
SEC3YER008C SAD1P43589 448 aa1.24□□□□□ -2.21
SEC3YER008C ORC5P50874 479 aa1.24□□□□□ -2.21
SEC3YER008C DIA3P52290 468 aa1.24□□□□□ -2.21
SEC3YER008C MPS2P53159 387 aa1.24□□□□□ -2.21
SEC3YER008C TWF1P53250 332 aa1.24□□□□□ -2.21
SEC3YER008C EFM6P53970 246 aa1.24□□□□□ -2.21
SEC3YER008C RTC5Q12108 567 aaKnown RBP1.24□□□□□ -2.21
SEC3YER008C SFI1Q12369 946 aa1.24□□□□□ -2.21
SEC3YER008C FKS1P38631 1876 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C STE2D6VTK4 431 aa1.23□□□□□ -2.21
SEC3YER008C TDH1P00360 332 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C MES1P00958 751 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C OPI3P05375 206 aa1.23□□□□□ -2.21
SEC3YER008C UBA1P22515 1024 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C LRE1P25579 583 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C IMG1P25626 169 aa1.23□□□□□ -2.21
SEC3YER008C ELO1P39540 310 aa1.23□□□□□ -2.21
SEC3YER008C BUD27P43573 796 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
SEC3YER008C STB2P46679 850 aa1.23□□□□□ -2.21
SEC3YER008C YGR149WP48236 432 aa1.23□□□□□ -2.21
SEC3YER008C BPL1P48445 690 aaPredicted RBP1.23□□□□□ -2.21
SEC3YER008C TIM21P53220 239 aa1.23□□□□□ -2.21
SEC3YER008C DCP2P53550 970 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C RPS15Q01855 142 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C RRN5Q02983 363 aa1.23□□□□□ -2.21
SEC3YER008C KAP95Q06142 861 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C SMD2Q06217 110 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C MRI1Q06489 411 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C YLR413WQ06689 675 aa1.23□□□□□ -2.21
SEC3YER008C APC5Q08683 685 aa1.23□□□□□ -2.21
SEC3YER008C APL5Q08951 932 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C PFA4Q12006 378 aa1.23□□□□□ -2.21
SEC3YER008C TAF3Q12297 353 aa1.23□□□□□ -2.21
SEC3YER008C NDJ1Q12366 352 aa1.23□□□□□ -2.21
SEC3YER008C UBR2Q07963 1872 aa1.23□□□□□ -2.21
SEC3YER008C CBP1P07252 654 aa1.23□□□□□ -2.21
SEC3YER008C SPO7P18410 259 aa1.23□□□□□ -2.21
SEC3YER008C YAP1P19880 650 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C TRS65P32893 560 aa1.23□□□□□ -2.21
SEC3YER008C IMP3P32899 183 aaPredicted RBP1.23□□□□□ -2.21
SEC3YER008C BUD2P33314 1104 aa1.23□□□□□ -2.21
SEC3YER008C YER034WP40022 185 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C CHS6P40955 746 aa1.23□□□□□ -2.21
SEC3YER008C EFM3P47163 339 aa1.23□□□□□ -2.21
SEC3YER008C PHB2P50085 310 aa1.23□□□□□ -2.21
SEC3YER008C YGL138CP53122 345 aa1.23□□□□□ -2.21
SEC3YER008C YGL082WP53155 381 aa1.23□□□□□ -2.21
SEC3YER008C RSM23Q01163 450 aa1.23□□□□□ -2.21
SEC3YER008C SKO1Q02100 647 aa1.23□□□□□ -2.21
SEC3YER008C KAP120Q02932 1032 aa1.23□□□□□ -2.21
SEC3YER008C MDM30Q05930 598 aa1.23□□□□□ -2.21
SEC3YER008C ATG23Q06671 453 aa1.23□□□□□ -2.21
SEC3YER008C GRE1Q08969 168 aa1.23□□□□□ -2.21
SEC3YER008C LDB17Q12342 491 aa1.23□□□□□ -2.21
SEC3YER008C YLR278CQ05854 1341 aa1.23□□□□□ -2.21
SEC3YER008C RIF1P29539 1916 aa1.23□□□□□ -2.21
SEC3YER008C COR1P07256 457 aa1.23□□□□□ -2.21
SEC3YER008C DFR1P07807 211 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
SEC3YER008C TAL1P15019 335 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C PET123P17558 318 aa1.23□□□□□ -2.21
SEC3YER008C DAL81P21657 970 aa1.23□□□□□ -2.21
SEC3YER008C ILV6P25605 309 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C BEM1P29366 551 aa1.23□□□□□ -2.21
SEC3YER008C AFG1P32317 509 aa1.23□□□□□ -2.21
SEC3YER008C RIM1P32445 135 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C RAD23P32628 398 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C MRE11P32829 692 aa1.23□□□□□ -2.21
SEC3YER008C YBR144CP34215 104 aa1.23□□□□□ -2.21
SEC3YER008C VBA2P38358 474 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C PSA1P41940 361 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C GAT1P43574 510 aa1.23□□□□□ -2.21
SEC3YER008C RIB4P50861 169 aaPredicted RBP1.23□□□□□ -2.21
SEC3YER008C YGL117WP53133 265 aa1.23□□□□□ -2.21
SEC3YER008C MLC1P53141 149 aa1.23□□□□□ -2.21
SEC3YER008C YMR178WQ03219 274 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C EMI2Q04409 500 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C ADE13Q05911 482 aaKnown RBP1.23□□□□□ -2.21
SEC3YER008C AFT2Q08957 416 aa1.23□□□□□ -2.21
SEC3YER008C RKM5Q12367 367 aa1.23□□□□□ -2.21
SEC3YER008C SPO24Q3E752 67 aa1.23□□□□□ -2.21
SEC3YER008C CLN1P20437 546 aa1.22□□□□□ -2.21
SEC3YER008C GSH1P32477 678 aa1.22□□□□□ -2.21
SEC3YER008C HIR2P32480 875 aa1.22□□□□□ -2.21
SEC3YER008C DOA4P32571 926 aa1.22□□□□□ -2.21
SEC3YER008C SSE1P32589 693 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C SSE2P32590 693 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C YSC83P32792 385 aa1.22□□□□□ -2.21
SEC3YER008C COT1P32798 439 aa1.22□□□□□ -2.21
SEC3YER008C ASC1P38011 319 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C HSM3P38348 480 aa1.22□□□□□ -2.21
SEC3YER008C ARP1P38696 384 aa1.22□□□□□ -2.21
SEC3YER008C MSR1P38714 643 aa1.22□□□□□ -2.21
SEC3YER008C MKT1P40850 830 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C MSY1P48527 492 aa1.22□□□□□ -2.21
SEC3YER008C TOS2P50078 622 aa1.22□□□□□ -2.21
SEC3YER008C PMT5P52867 743 aa1.22□□□□□ -2.21
SEC3YER008C HEF3P53978 1044 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C SNT309Q06091 175 aaPredicted RBP1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms