RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	YNL260C	P53846	198 aa		5.7	□□□□□ -1.5
CHL4	YDR254W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
CHL4	YDR254W	GCN5	Q03330	439 aa		5.7	□□□□□ -1.5
CHL4	YDR254W	RCR2	Q03446	210 aa	Known RBP	5.7	□□□□□ -1.5
CHL4	YDR254W	YDR222W	Q04925	415 aa		5.7	□□□□□ -1.5
CHL4	YDR254W	COX20	Q04935	205 aa		5.7	□□□□□ -1.5
CHL4	YDR254W	DCR2	Q05924	578 aa		5.7	□□□□□ -1.5
CHL4	YDR254W	CDD1	Q06549	142 aa		5.7	□□□□□ -1.5
CHL4	YDR254W	YRA1	Q12159	226 aa	Known RBP	5.7	□□□□□ -1.5
CHL4	YDR254W	PDA1	P16387	420 aa	Known RBP	5.69	□□□□□ -1.5
CHL4	YDR254W	SNF6	P18888	332 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	VPS33	P20795	691 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	MGR1	P25573	417 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	PEX3	P28795	441 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	ECT1	P33412	323 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	SOP4	P39543	234 aa	Predicted RBP	5.69	□□□□□ -1.5
CHL4	YDR254W	YJL118W	P47022	219 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	AIM22	P47051	409 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	COS5	P47187	383 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	VMA10	P48836	114 aa	Known RBP	5.69	□□□□□ -1.5
CHL4	YDR254W	LSG1	P53145	640 aa	Known RBP	5.69	□□□□□ -1.5
CHL4	YDR254W	ADE16	P54113	591 aa	Known RBP	5.69	□□□□□ -1.5
CHL4	YDR254W	YKR011C	Q02209	353 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	VPS60	Q03390	229 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	EKI1	Q03764	534 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	RPC11	Q04307	110 aa	Predicted RBP	5.69	□□□□□ -1.5
CHL4	YDR254W	COS7	Q07788	383 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	YEH2	Q07950	538 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	SDO1	Q07953	250 aa	Known RBP	5.69	□□□□□ -1.5
CHL4	YDR254W	SIL1	Q08199	421 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	YOL075C	Q08234	1294 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	GPN2	Q08726	347 aa	Predicted RBP	5.69	□□□□□ -1.5
CHL4	YDR254W	RLM1	Q12224	676 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	RRP12	Q12754	1228 aa	Known RBP	5.69	□□□□□ -1.5
CHL4	YDR254W	TAD3	Q9URQ3	322 aa		5.69	□□□□□ -1.5
CHL4	YDR254W	YBR085C-A	O43137	85 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
CHL4	YDR254W	RAD3	P06839	778 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	CDC33	P07260	213 aa	Known RBP	5.68	□□□□□ -1.5
CHL4	YDR254W	FBA1	P14540	359 aa	Known RBP	5.68	□□□□□ -1.5
CHL4	YDR254W	POL30	P15873	258 aa	Known RBP	5.68	□□□□□ -1.5
CHL4	YDR254W	YAP1	P19880	650 aa	Known RBP	5.68	□□□□□ -1.5
CHL4	YDR254W	VPS1	P21576	704 aa	Known RBP	5.68	□□□□□ -1.5
CHL4	YDR254W	YUR1	P26725	428 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	GSY2	P27472	705 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	MEI4	P29467	408 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	RAD23	P32628	398 aa	Known RBP	5.68	□□□□□ -1.5
CHL4	YDR254W	TYE7	P33122	291 aa	Predicted RBP	5.68	□□□□□ -1.5
CHL4	YDR254W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
CHL4	YDR254W	AST1	P35183	429 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	IML3	P38265	245 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	SEC24	P40482	926 aa	Known RBP	5.68	□□□□□ -1.5
CHL4	YDR254W	STB2	P46679	850 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	IMD4	P50094	524 aa	Known RBP	5.68	□□□□□ -1.5
CHL4	YDR254W	YGL159W	P53110	370 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	MFM1	Q02783	413 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	FMP30	Q02883	468 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	FIN1	Q03898	291 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	HMO1	Q03973	246 aa	Known RBP	5.68	□□□□□ -1.5
CHL4	YDR254W	SPC24	Q04477	213 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	ORM2	Q06144	216 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	CRT10	Q08226	957 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	RAX1	Q08760	435 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	SEY1	Q99287	776 aa		5.68	□□□□□ -1.5
CHL4	YDR254W	CYC1	P00044	109 aa	Predicted RBP	5.67	□□□□□ -1.5
CHL4	YDR254W	CAR1	P00812	333 aa	Known RBP	5.67	□□□□□ -1.5
CHL4	YDR254W	RAD1	P06777	1100 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	FRS1	P15624	595 aa	Known RBP	5.67	□□□□□ -1.5
CHL4	YDR254W	CBF1	P17106	351 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	YSR3	P23501	404 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	RPL24B	P24000	155 aa	Known RBP	5.67	□□□□□ -1.5
CHL4	YDR254W	GIT1	P25346	518 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	PRP45	P28004	379 aa	Predicted RBP	5.67	□□□□□ -1.5
CHL4	YDR254W	SPO23	P33757	523 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	DOA1	P36037	715 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	YJL193W	P39542	402 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	VHS2	P40463	436 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	ICE2	P40499	491 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	GAB1	P41733	394 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	DCS1	Q06151	350 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	PAM18	Q07914	168 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	DDC1	Q08949	612 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	YOR029W	Q12243	111 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	YOR012W	Q12351	137 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	RHO1	P06780	209 aa	Known RBP	5.67	□□□□□ -1.5
CHL4	YDR254W	MET16	P18408	261 aa	Predicted RBP	5.67	□□□□□ -1.5
CHL4	YDR254W	PRP4	P20053	465 aa	Known RBP	5.67	□□□□□ -1.5
CHL4	YDR254W	SIN4	P32259	974 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	SKG6	P32900	734 aa	Predicted RBP	5.67	□□□□□ -1.5
CHL4	YDR254W	RPC25	P35718	212 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	FES1	P38260	290 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	STB5	P38699	743 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	YEL020C	P39994	560 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	YMR147W	P40218	223 aa	Known RBP	5.67	□□□□□ -1.5
CHL4	YDR254W	SOK1	P40317	901 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	PHB1	P40961	287 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	DPB11	P47027	764 aa	Predicted RBP	5.67	□□□□□ -1.5
CHL4	YDR254W	COX16	P47081	118 aa		5.67	□□□□□ -1.5
CHL4	YDR254W	MTG1	Q03151	367 aa	Predicted RBP	5.67	□□□□□ -1.5
CHL4	YDR254W	ROT1	Q03691	256 aa		5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms