RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W NMD5P46970 1048 aa2.05□□□□□ -2.08
SIR4YDR227W IMD4P50094 524 aaKnown RBP2.05□□□□□ -2.08
SIR4YDR227W MRPL50P53724 139 aa2.05□□□□□ -2.08
SIR4YDR227W ZRG17P53735 605 aa2.05□□□□□ -2.08
SIR4YDR227W NOG2P53742 486 aaKnown RBP2.05□□□□□ -2.08
SIR4YDR227W SLD5Q03406 294 aa2.05□□□□□ -2.08
SIR4YDR227W UTP5Q04177 643 aaKnown RBP2.05□□□□□ -2.08
SIR4YDR227W YMR130WQ04223 302 aa2.05□□□□□ -2.08
SIR4YDR227W URC2Q04411 772 aa2.05□□□□□ -2.08
SIR4YDR227W CTS2Q06350 511 aa2.05□□□□□ -2.08
SIR4YDR227W ARO10Q06408 635 aa2.05□□□□□ -2.08
SIR4YDR227W YDL057WQ07379 328 aa2.05□□□□□ -2.08
SIR4YDR227W YLR031WQ07978 186 aa2.05□□□□□ -2.08
SIR4YDR227W YOR029WQ12243 111 aa2.05□□□□□ -2.08
SIR4YDR227W YBR085C-AO43137 85 aa2.04□□□□□ -2.08
SIR4YDR227W MATALPHA1P0CY06 175 aa2.04□□□□□ -2.08
SIR4YDR227W HMLALPHA1P0CY07 175 aa2.04□□□□□ -2.08
SIR4YDR227W SCH9P11792 824 aaKnown RBP2.04□□□□□ -2.08
SIR4YDR227W OLE1P21147 510 aaKnown RBP2.04□□□□□ -2.08
SIR4YDR227W TKL1P23254 680 aaKnown RBP2.04□□□□□ -2.08
SIR4YDR227W RAD24P32641 659 aa2.04□□□□□ -2.08
SIR4YDR227W AUR1P36107 401 aaPredicted RBP2.04□□□□□ -2.08
SIR4YDR227W TVP38P36164 337 aa2.04□□□□□ -2.08
SIR4YDR227W AKL1P38080 1108 aaKnown RBP2.04□□□□□ -2.08
SIR4YDR227W PRE6P40303 254 aaKnown RBP2.04□□□□□ -2.08
SIR4YDR227W ALK1P43633 760 aaKnown RBP2.04□□□□□ -2.08
SIR4YDR227W MPS2P53159 387 aa2.04□□□□□ -2.08
SIR4YDR227W HLR1Q04429 423 aa2.04□□□□□ -2.08
SIR4YDR227W SLP1Q12232 587 aa2.04□□□□□ -2.08
SIR4YDR227W MED4Q12343 284 aa2.04□□□□□ -2.08
SIR4YDR227W RIB2Q12362 591 aaKnown RBP2.04□□□□□ -2.08
SIR4YDR227W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
SIR4YDR227W SEY1Q99287 776 aa2.04□□□□□ -2.08
SIR4YDR227W MOD5P07884 428 aa2.04□□□□□ -2.08
SIR4YDR227W TY1A-LR4P0C2I8 440 aaKnown RBP2.04□□□□□ -2.08
SIR4YDR227W TY1A-DR6P0CX70 440 aa2.04□□□□□ -2.08
SIR4YDR227W TY1A-ER1P0CX71 440 aa2.04□□□□□ -2.08
SIR4YDR227W TY1A-LR2P0CX72 440 aa2.04□□□□□ -2.08
SIR4YDR227W TY1A-PLP0CX73 440 aa2.04□□□□□ -2.08
SIR4YDR227W TY1A-JR1P0CX74 440 aa2.04□□□□□ -2.08
SIR4YDR227W TY1A-LR3P0CX75 440 aa2.04□□□□□ -2.08
SIR4YDR227W TY1A-ML2P0CX76 440 aa2.04□□□□□ -2.08
SIR4YDR227W PRP6P19735 899 aaPredicted RBP2.04□□□□□ -2.08
SIR4YDR227W MSB1P21339 1137 aaKnown RBP2.04□□□□□ -2.08
SIR4YDR227W UTR4P32626 227 aa2.04□□□□□ -2.08
SIR4YDR227W ARA1P38115 344 aa2.04□□□□□ -2.08
SIR4YDR227W YHR078WP38799 552 aa2.04□□□□□ -2.08
SIR4YDR227W SMF1P38925 575 aa2.04□□□□□ -2.08
SIR4YDR227W YER184CP39961 794 aa2.04□□□□□ -2.08
SIR4YDR227W ATM1P40416 690 aa2.04□□□□□ -2.08
SIR4YDR227W TED1P40533 473 aa2.04□□□□□ -2.08
SIR4YDR227W CAF16P43569 289 aa2.04□□□□□ -2.08
SIR4YDR227W AIM22P47051 409 aa2.04□□□□□ -2.08
SIR4YDR227W SNX4P47057 423 aa2.04□□□□□ -2.08
SIR4YDR227W YGR168CP53293 376 aa2.04□□□□□ -2.08
SIR4YDR227W YNR040WP53736 256 aa2.04□□□□□ -2.08
SIR4YDR227W MRS2Q01926 470 aa2.04□□□□□ -2.08
SIR4YDR227W ARG7Q04728 441 aa2.04□□□□□ -2.08
SIR4YDR227W ASM4Q05166 528 aa2.04□□□□□ -2.08
SIR4YDR227W TY1A-GR1Q12085 440 aa2.04□□□□□ -2.08
SIR4YDR227W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.04□□□□□ -2.08
SIR4YDR227W TY1A-OLQ92392 440 aaKnown RBP2.04□□□□□ -2.08
SIR4YDR227W PET494P07390 489 aaPredicted RBP2.04□□□□□ -2.08
SIR4YDR227W MAS2P11914 482 aa2.04□□□□□ -2.08
SIR4YDR227W ARO3P14843 370 aaKnown RBP2.04□□□□□ -2.08
SIR4YDR227W SRP54P20424 541 aaKnown RBP2.04□□□□□ -2.08
SIR4YDR227W BUD5P25300 642 aaPredicted RBP2.04□□□□□ -2.08
SIR4YDR227W YNL092WP53934 400 aa2.04□□□□□ -2.08
SIR4YDR227W YDR541CQ03049 344 aa2.04□□□□□ -2.08
SIR4YDR227W UFO1Q04511 668 aa2.04□□□□□ -2.08
SIR4YDR227W COG8Q04632 607 aa2.04□□□□□ -2.08
SIR4YDR227W SMC5Q08204 1093 aa2.04□□□□□ -2.08
SIR4YDR227W ENV7Q12003 364 aa2.04□□□□□ -2.08
SIR4YDR227W YVC1Q12324 675 aa2.04□□□□□ -2.08
SIR4YDR227W EMP46Q12396 444 aa2.04□□□□□ -2.08
SIR4YDR227W MGR1P25573 417 aa2.03□□□□□ -2.08
SIR4YDR227W POP5P28005 173 aa2.03□□□□□ -2.08
SIR4YDR227W YIM1P28625 365 aa2.03□□□□□ -2.08
SIR4YDR227W YME2P32843 850 aa2.03□□□□□ -2.08
SIR4YDR227W YKL102CP34249 101 aa2.03□□□□□ -2.08
SIR4YDR227W PCH2P38126 564 aa2.03□□□□□ -2.08
SIR4YDR227W RTC2P38279 296 aa2.03□□□□□ -2.08
SIR4YDR227W ALP1P38971 573 aa2.03□□□□□ -2.08
SIR4YDR227W VRG4P40107 337 aa2.03□□□□□ -2.08
SIR4YDR227W UTP18P40362 594 aaPredicted RBP2.03□□□□□ -2.08
SIR4YDR227W HOT1Q03213 719 aa2.03□□□□□ -2.08
SIR4YDR227W GTB1Q04924 702 aa2.03□□□□□ -2.08
SIR4YDR227W YPQ2Q06328 317 aa2.03□□□□□ -2.08
SIR4YDR227W BRE4Q07660 1125 aa2.03□□□□□ -2.08
SIR4YDR227W AEP3Q12089 606 aa2.03□□□□□ -2.08
SIR4YDR227W YDR215CQ12240 137 aa2.03□□□□□ -2.08
SIR4YDR227W HEM2P05373 342 aa2.03□□□□□ -2.08
SIR4YDR227W ILV2P07342 687 aaKnown RBP2.03□□□□□ -2.08
SIR4YDR227W MAS1P10507 462 aa2.03□□□□□ -2.08
SIR4YDR227W GSH1P32477 678 aa2.03□□□□□ -2.08
SIR4YDR227W GDA1P32621 518 aa2.03□□□□□ -2.08
SIR4YDR227W RSM22P36056 628 aa2.03□□□□□ -2.08
SIR4YDR227W EHT1P38295 451 aa2.03□□□□□ -2.08
SIR4YDR227W MCX1P38323 520 aaPredicted RBP2.03□□□□□ -2.08
SIR4YDR227W SEC72P39742 193 aaKnown RBP2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms