RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C MIX23P38162 196 aa1.69□□□□□ -2.14
SWI5YDR146C MST28P39552 234 aa1.69□□□□□ -2.14
SWI5YDR146C SPG5P42933 373 aa1.69□□□□□ -2.14
SWI5YDR146C YPI1P43587 155 aa1.69□□□□□ -2.14
SWI5YDR146C YJR011CP47086 261 aaPredicted RBP1.69□□□□□ -2.14
SWI5YDR146C ECM27P47144 725 aa1.69□□□□□ -2.14
SWI5YDR146C COS5P47187 383 aa1.69□□□□□ -2.14
SWI5YDR146C FMS1P50264 508 aa1.69□□□□□ -2.14
SWI5YDR146C MNP1P53163 194 aaPredicted RBP1.69□□□□□ -2.14
SWI5YDR146C SCW10Q04951 389 aa1.69□□□□□ -2.14
SWI5YDR146C RRP45Q05636 305 aaKnown RBP1.69□□□□□ -2.14
SWI5YDR146C COS7Q07788 383 aa1.69□□□□□ -2.14
SWI5YDR146C THP3Q12049 470 aaKnown RBP1.69□□□□□ -2.14
SWI5YDR146C VAM3Q12241 283 aa1.69□□□□□ -2.14
SWI5YDR146C RMD5Q12508 421 aa1.69□□□□□ -2.14
SWI5YDR146C RRP12Q12754 1228 aaKnown RBP1.69□□□□□ -2.14
SWI5YDR146C ILV5P06168 395 aaKnown RBP1.68□□□□□ -2.14
SWI5YDR146C CPR1P14832 162 aaKnown RBP1.68□□□□□ -2.14
SWI5YDR146C PDX1P16451 410 aa1.68□□□□□ -2.14
SWI5YDR146C FUR1P18562 216 aaKnown RBP1.68□□□□□ -2.14
SWI5YDR146C CTR86P25355 563 aa1.68□□□□□ -2.14
SWI5YDR146C YCR051WP25631 222 aa1.68□□□□□ -2.14
SWI5YDR146C TIP1P27654 210 aaPredicted RBP1.68□□□□□ -2.14
SWI5YDR146C HIR2P32480 875 aa1.68□□□□□ -2.14
SWI5YDR146C REC114P32841 428 aa1.68□□□□□ -2.14
SWI5YDR146C YOX1P34161 385 aa1.68□□□□□ -2.14
SWI5YDR146C ARA1P38115 344 aa1.68□□□□□ -2.14
SWI5YDR146C YBR137WP38276 179 aa1.68□□□□□ -2.14
SWI5YDR146C VHC1P38329 1120 aa1.68□□□□□ -2.14
SWI5YDR146C MKT1P40850 830 aaKnown RBP1.68□□□□□ -2.14
SWI5YDR146C TOM22P49334 152 aa1.68□□□□□ -2.14
SWI5YDR146C POP6P53218 158 aa1.68□□□□□ -2.14
SWI5YDR146C PCP1P53259 346 aa1.68□□□□□ -2.14
SWI5YDR146C IBD2P53892 351 aa1.68□□□□□ -2.14
SWI5YDR146C SKO1Q02100 647 aa1.68□□□□□ -2.14
SWI5YDR146C KAP120Q02932 1032 aa1.68□□□□□ -2.14
SWI5YDR146C YDR387CQ04162 555 aa1.68□□□□□ -2.14
SWI5YDR146C ROY1Q04847 553 aa1.68□□□□□ -2.14
SWI5YDR146C RAD61Q99359 647 aa1.68□□□□□ -2.14
SWI5YDR146C HIS4P00815 799 aaKnown RBP1.67□□□□□ -2.14
SWI5YDR146C SCEIP03882 235 aa1.67□□□□□ -2.14
SWI5YDR146C YAR066WP0CX18 203 aa1.67□□□□□ -2.14
SWI5YDR146C YHR214WP0CX19 203 aa1.67□□□□□ -2.14
SWI5YDR146C MPE1P35728 441 aaKnown RBP1.67□□□□□ -2.14
SWI5YDR146C RSM22P36056 628 aa1.67□□□□□ -2.14
SWI5YDR146C STB6P36085 766 aa1.67□□□□□ -2.14
SWI5YDR146C YBP1P38315 674 aa1.67□□□□□ -2.14
SWI5YDR146C YHR054CP38780 354 aa1.67□□□□□ -2.14
SWI5YDR146C YNR048WP53740 393 aa1.67□□□□□ -2.14
SWI5YDR146C ERB1Q04660 807 aaKnown RBP1.67□□□□□ -2.14
SWI5YDR146C YPR022CQ12139 1133 aa1.67□□□□□ -2.14
SWI5YDR146C ORT1Q12375 292 aa1.67□□□□□ -2.14
SWI5YDR146C BEM1P29366 551 aa1.67□□□□□ -2.14
SWI5YDR146C APE2P32454 952 aaKnown RBP1.67□□□□□ -2.14
SWI5YDR146C MRP4P32902 394 aa1.67□□□□□ -2.14
SWI5YDR146C SOR1P35497 357 aaKnown RBP1.67□□□□□ -2.14
SWI5YDR146C APE3P37302 537 aaKnown RBP1.67□□□□□ -2.14
SWI5YDR146C FAA2P39518 744 aa1.67□□□□□ -2.14
SWI5YDR146C YIL067CP40514 678 aa1.67□□□□□ -2.14
SWI5YDR146C REE1P40893 198 aa1.67□□□□□ -2.14
SWI5YDR146C SSN8P47821 323 aa1.67□□□□□ -2.14
SWI5YDR146C TCB2P48231 1178 aa1.67□□□□□ -2.14
SWI5YDR146C DSL1P53847 754 aa1.67□□□□□ -2.14
SWI5YDR146C TAF12Q03761 539 aa1.67□□□□□ -2.14
SWI5YDR146C SPC19Q03954 165 aa1.67□□□□□ -2.14
SWI5YDR146C DON1Q05610 365 aa1.67□□□□□ -2.14
SWI5YDR146C SOR2Q07786 357 aa1.67□□□□□ -2.14
SWI5YDR146C SGT1Q08446 395 aa1.67□□□□□ -2.14
SWI5YDR146C RSA1Q08932 381 aa1.67□□□□□ -2.14
SWI5YDR146C TMS1Q12116 473 aa1.67□□□□□ -2.14
SWI5YDR146C COX3P00420 269 aa1.66□□□□□ -2.14
SWI5YDR146C SAM1P10659 382 aaKnown RBP1.66□□□□□ -2.14
SWI5YDR146C SPT15P13393 240 aaKnown RBP1.66□□□□□ -2.14
SWI5YDR146C SAM2P19358 384 aaKnown RBP1.66□□□□□ -2.14
SWI5YDR146C RPI1P23250 407 aaKnown RBP1.66□□□□□ -2.14
SWI5YDR146C CLB1P24868 471 aa1.66□□□□□ -2.14
SWI5YDR146C RHB1P25378 209 aa1.66□□□□□ -2.14
SWI5YDR146C YAL037WP39728 267 aa1.66□□□□□ -2.14
SWI5YDR146C OST1P41543 476 aaKnown RBP1.66□□□□□ -2.14
SWI5YDR146C RPS0BP46654 252 aaKnown RBP1.66□□□□□ -2.14
SWI5YDR146C GIS2P53849 153 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
SWI5YDR146C GPI15P53961 229 aa1.66□□□□□ -2.14
SWI5YDR146C HXT11P54862 567 aa1.66□□□□□ -2.14
SWI5YDR146C ELP3Q02908 557 aaKnown RBP1.66□□□□□ -2.14
SWI5YDR146C YMR181CQ03231 154 aa1.66□□□□□ -2.14
SWI5YDR146C ACL4Q03771 387 aa1.66□□□□□ -2.14
SWI5YDR146C MMR1Q06324 491 aa1.66□□□□□ -2.14
SWI5YDR146C MRPL35Q06678 367 aa1.66□□□□□ -2.14
SWI5YDR146C SKI7Q08491 747 aaPredicted RBP1.66□□□□□ -2.14
SWI5YDR146C ESA1Q08649 445 aa1.66□□□□□ -2.14
SWI5YDR146C YOR387CQ08910 206 aa1.66□□□□□ -2.14
SWI5YDR146C CPR4P25334 318 aa1.66□□□□□ -2.14
SWI5YDR146C LSB5P25369 354 aa1.66□□□□□ -2.14
SWI5YDR146C SPS22P25380 463 aa1.66□□□□□ -2.14
SWI5YDR146C NAM9P27929 486 aa1.66□□□□□ -2.14
SWI5YDR146C SMY1P32364 656 aaKnown RBP1.66□□□□□ -2.14
SWI5YDR146C NAT2P37293 288 aa1.66□□□□□ -2.14
SWI5YDR146C NTC20P38302 140 aaPredicted RBP1.66□□□□□ -2.14
SWI5YDR146C RRT2P38332 387 aa1.66□□□□□ -2.14
SWI5YDR146C LYS1P38998 373 aaRIP-Chip data1.66□□□□□ -2.14not detected
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms