RNA–Protein interactions for RNA: YDR034C-C

YDR034C-C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR034C-C, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-CYDR034C-C RPN12P32496 274 aa3.65□□□□□ -1.83
YDR034C-CYDR034C-C STB6P36085 766 aa3.65□□□□□ -1.83
YDR034C-CYDR034C-C RIB5P38145 238 aa3.65□□□□□ -1.83
YDR034C-CYDR034C-C MIX23P38162 196 aa3.65□□□□□ -1.83
YDR034C-CYDR034C-C RFS1P38234 210 aaKnown RBP3.65□□□□□ -1.83
YDR034C-CYDR034C-C VHC1P38329 1120 aa3.65□□□□□ -1.83
YDR034C-CYDR034C-C NCA3P46955 337 aa3.65□□□□□ -1.83
YDR034C-CYDR034C-C TOF1P53840 1238 aa3.65□□□□□ -1.83
YDR034C-CYDR034C-C PKH2Q12236 1081 aaKnown RBP3.65□□□□□ -1.83
YDR034C-CYDR034C-C HIS4P00815 799 aaKnown RBP3.64□□□□□ -1.83
YDR034C-CYDR034C-C PRP21P32524 280 aaPredicted RBP3.64□□□□□ -1.83
YDR034C-CYDR034C-C ECM25P32525 599 aa3.64□□□□□ -1.83
YDR034C-CYDR034C-C YHR054CP38780 354 aa3.64□□□□□ -1.83
YDR034C-CYDR034C-C MST28P39552 234 aa3.64□□□□□ -1.83
YDR034C-CYDR034C-C SDT1P53078 280 aa3.64□□□□□ -1.83
YDR034C-CYDR034C-C YIF1P53845 314 aaKnown RBP3.64□□□□□ -1.83
YDR034C-CYDR034C-C MDG1P53885 366 aa3.64□□□□□ -1.83
YDR034C-CYDR034C-C ADD37Q03233 198 aa3.64□□□□□ -1.83
YDR034C-CYDR034C-C TIM18Q08749 192 aa3.64□□□□□ -1.83
YDR034C-CYDR034C-C RRD2Q12461 358 aa3.64□□□□□ -1.83
YDR034C-CYDR034C-C RED1P14291 827 aa3.63□□□□□ -1.83
YDR034C-CYDR034C-C CLB3P24870 427 aa3.63□□□□□ -1.83
YDR034C-CYDR034C-C TIP1P27654 210 aaPredicted RBP3.63□□□□□ -1.83
YDR034C-CYDR034C-C YIM1P28625 365 aa3.63□□□□□ -1.83
YDR034C-CYDR034C-C HCS1P34243 683 aa3.63□□□□□ -1.83
YDR034C-CYDR034C-C ARA1P38115 344 aa3.63□□□□□ -1.83
YDR034C-CYDR034C-C NAB3P38996 802 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
YDR034C-CYDR034C-C CCT2P39076 527 aaKnown RBP3.63□□□□□ -1.83
YDR034C-CYDR034C-C PRE5P40302 234 aaKnown RBP3.63□□□□□ -1.83
YDR034C-CYDR034C-C ESL1P40456 1118 aa3.63□□□□□ -1.83
YDR034C-CYDR034C-C YPR022CQ12139 1133 aa3.63□□□□□ -1.83
YDR034C-CYDR034C-C RTN2Q12443 393 aa3.63□□□□□ -1.83
YDR034C-CYDR034C-C INH1P01097 85 aa3.62□□□□□ -1.83
YDR034C-CYDR034C-C HXT3P32466 567 aaKnown RBP3.62□□□□□ -1.83
YDR034C-CYDR034C-C MTC6P38849 526 aa3.62□□□□□ -1.83
YDR034C-CYDR034C-C PRM5P40476 318 aa3.62□□□□□ -1.83
YDR034C-CYDR034C-C VMA13P41807 478 aaKnown RBP3.62□□□□□ -1.83
YDR034C-CYDR034C-C FMS1P50264 508 aa3.62□□□□□ -1.83
YDR034C-CYDR034C-C COG4Q06096 861 aa3.62□□□□□ -1.83
YDR034C-CYDR034C-C REX4Q08237 289 aa3.62□□□□□ -1.83
YDR034C-CYDR034C-C RRG7Q08774 242 aaPredicted RBP3.62□□□□□ -1.83
YDR034C-CYDR034C-C TMS1Q12116 473 aa3.62□□□□□ -1.83
YDR034C-CYDR034C-C RTP1Q12751 981 aa3.62□□□□□ -1.83
YDR034C-CYDR034C-C RAD61Q99359 647 aa3.62□□□□□ -1.83
YDR034C-CYDR034C-C ARG4P04076 463 aaPredicted RBP3.61□□□□□ -1.83
YDR034C-CYDR034C-C SRV2P17555 526 aaKnown RBP3.61□□□□□ -1.83
YDR034C-CYDR034C-C PET123P17558 318 aa3.61□□□□□ -1.83
YDR034C-CYDR034C-C CLC1P17891 233 aa3.61□□□□□ -1.83
YDR034C-CYDR034C-C REE1P40893 198 aa3.61□□□□□ -1.83
YDR034C-CYDR034C-C DLD2P46681 530 aaKnown RBP3.61□□□□□ -1.83
YDR034C-CYDR034C-C FRE4P53746 719 aa3.61□□□□□ -1.83
YDR034C-CYDR034C-C KTR5P53966 522 aaPredicted RBP3.61□□□□□ -1.83
YDR034C-CYDR034C-C HER2Q03557 464 aa3.61□□□□□ -1.83
YDR034C-CYDR034C-C SGT1Q08446 395 aa3.61□□□□□ -1.83
YDR034C-CYDR034C-C TEF1P02994 458 aaKnown RBP3.6□□□□□ -1.83
YDR034C-CYDR034C-C RIP1P08067 215 aa3.6□□□□□ -1.83
YDR034C-CYDR034C-C DAL2P25335 343 aa3.6□□□□□ -1.83
YDR034C-CYDR034C-C PIM1P36775 1133 aa3.6□□□□□ -1.83
YDR034C-CYDR034C-C FAA2P39518 744 aa3.6□□□□□ -1.83
YDR034C-CYDR034C-C YMR181CQ03231 154 aa3.6□□□□□ -1.83
YDR034C-CYDR034C-C PPM1Q04081 328 aa3.6□□□□□ -1.83
YDR034C-CYDR034C-C TAF11Q04226 346 aa3.6□□□□□ -1.83
YDR034C-CYDR034C-C HRI1Q05905 244 aaKnown RBP3.6□□□□□ -1.83
YDR034C-CYDR034C-C SIL1Q08199 421 aa3.6□□□□□ -1.83
YDR034C-CYDR034C-C HSP42Q12329 375 aa3.6□□□□□ -1.83
YDR034C-CYDR034C-C CLN3P13365 580 aa3.59□□□□□ -1.83
YDR034C-CYDR034C-C SLY1P22213 666 aa3.59□□□□□ -1.83
YDR034C-CYDR034C-C SAS3P34218 831 aa3.59□□□□□ -1.83
YDR034C-CYDR034C-C NTC20P38302 140 aaPredicted RBP3.59□□□□□ -1.83
YDR034C-CYDR034C-C LYS1P38998 373 aaRIP-Chip data3.59□□□□□ -1.83not detected
YDR034C-CYDR034C-C RRP45Q05636 305 aaKnown RBP3.59□□□□□ -1.83
YDR034C-CYDR034C-C MRPL35Q06678 367 aa3.59□□□□□ -1.83
YDR034C-CYDR034C-C RVS161P25343 265 aaKnown RBP3.58□□□□□ -1.84
YDR034C-CYDR034C-C RPS0BP46654 252 aaKnown RBP3.58□□□□□ -1.84
YDR034C-CYDR034C-C HMS2P47175 358 aa3.58□□□□□ -1.84
YDR034C-CYDR034C-C YNR048WP53740 393 aa3.58□□□□□ -1.84
YDR034C-CYDR034C-C RPA49Q01080 415 aaPredicted RBP3.58□□□□□ -1.84
YDR034C-CYDR034C-C PEX25Q02969 394 aa3.58□□□□□ -1.84
YDR034C-CYDR034C-C YLR287CQ05881 355 aa3.58□□□□□ -1.84
YDR034C-CYDR034C-C TMC1Q08422 150 aaPredicted RBP3.58□□□□□ -1.84
YDR034C-CYDR034C-C SNX3Q08826 162 aaKnown RBP3.58□□□□□ -1.84
YDR034C-CYDR034C-C HRT3Q12347 344 aa3.58□□□□□ -1.84
YDR034C-CYDR034C-C REC107P21651 314 aa3.57□□□□□ -1.84
YDR034C-CYDR034C-C MNS1P32906 549 aa3.57□□□□□ -1.84
YDR034C-CYDR034C-C KKQ8P36004 724 aa3.57□□□□□ -1.84
YDR034C-CYDR034C-C PAN6P40459 309 aa3.57□□□□□ -1.84
YDR034C-CYDR034C-C SAS2P40963 338 aa3.57□□□□□ -1.84
YDR034C-CYDR034C-C MDM1Q01846 1127 aa3.57□□□□□ -1.84
YDR034C-CYDR034C-C SYF1Q04048 859 aaPredicted RBP3.57□□□□□ -1.84
YDR034C-CYDR034C-C SFI1Q12369 946 aa3.57□□□□□ -1.84
YDR034C-CYDR034C-C CDC31P06704 161 aaKnown RBP3.56□□□□□ -1.84
YDR034C-CYDR034C-C SPO7P18410 259 aa3.56□□□□□ -1.84
YDR034C-CYDR034C-C ISY1P21374 235 aaPredicted RBP3.56□□□□□ -1.84
YDR034C-CYDR034C-C LSB5P25369 354 aa3.56□□□□□ -1.84
YDR034C-CYDR034C-C ERG3P32353 365 aa3.56□□□□□ -1.84
YDR034C-CYDR034C-C MUD1P32605 298 aaKnown RBP3.56□□□□□ -1.84
YDR034C-CYDR034C-C SWE1P32944 819 aa3.56□□□□□ -1.84
YDR034C-CYDR034C-C SWD3P38123 315 aa3.56□□□□□ -1.84
YDR034C-CYDR034C-C YJR011CP47086 261 aaPredicted RBP3.56□□□□□ -1.84
YDR034C-CYDR034C-C CWC25P53854 179 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms