RNA–Protein interactions for RNA: YCR067C

SED4, Transcript of Integral ER membrane protein that stimulates Sar1p GTPase activity, yeast

Gene SED4, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SED4	YCR067C	NET1	P47035	1189 aa		4.84	□□□□□ -1.63
SED4	YCR067C	YJL007C	P47080	104 aa		4.84	□□□□□ -1.63
SED4	YCR067C	NQM1	P53228	333 aa	Predicted RBP	4.84	□□□□□ -1.63
SED4	YCR067C	DBP6	P53734	629 aa	Known RBP	4.84	□□□□□ -1.63
SED4	YCR067C	MPS1	P54199	764 aa		4.84	□□□□□ -1.63
SED4	YCR067C	HXT11	P54862	567 aa		4.84	□□□□□ -1.63
SED4	YCR067C	DID2	P69771	204 aa		4.84	□□□□□ -1.63
SED4	YCR067C	AIM36	Q03798	255 aa		4.84	□□□□□ -1.63
SED4	YCR067C	ARA2	Q04212	335 aa		4.84	□□□□□ -1.63
SED4	YCR067C	CDD1	Q06549	142 aa		4.84	□□□□□ -1.63
SED4	YCR067C	YOL131W	Q08270	108 aa		4.84	□□□□□ -1.63
SED4	YCR067C	RPS10A	Q08745	105 aa	Predicted RBP	4.84	□□□□□ -1.63
SED4	YCR067C	HTA1	P04911	132 aa	Known RBP	4.84	□□□□□ -1.63
SED4	YCR067C	MOD5	P07884	428 aa		4.84	□□□□□ -1.63
SED4	YCR067C	FBP1	P09201	348 aa		4.84	□□□□□ -1.63
SED4	YCR067C	PRI2	P20457	528 aa		4.84	□□□□□ -1.63
SED4	YCR067C	YCR102C	P25608	368 aa		4.84	□□□□□ -1.63
SED4	YCR067C	ATP3	P38077	311 aa	Known RBP	4.84	□□□□□ -1.63
SED4	YCR067C	REG2	P38232	338 aa		4.84	□□□□□ -1.63
SED4	YCR067C	YBR053C	P38235	358 aa		4.84	□□□□□ -1.63
SED4	YCR067C	GND1	P38720	489 aa	Known RBP	4.84	□□□□□ -1.63
SED4	YCR067C	PTI1	P39927	425 aa	Predicted RBP	4.84	□□□□□ -1.63
SED4	YCR067C	RGI1	P40043	161 aa	Predicted RBP	4.84	□□□□□ -1.63
SED4	YCR067C	QDR2	P40474	542 aa		4.84	□□□□□ -1.63
SED4	YCR067C	VMA13	P41807	478 aa	Known RBP	4.84	□□□□□ -1.63
SED4	YCR067C	YFL052W	P43551	465 aa		4.84	□□□□□ -1.63
SED4	YCR067C	FMP48	P53233	369 aa		4.84	□□□□□ -1.63
SED4	YCR067C	LSM7	P53905	115 aa	Known RBP	4.84	□□□□□ -1.63
SED4	YCR067C	KTR6	P54070	446 aa		4.84	□□□□□ -1.63
SED4	YCR067C	NAM8	Q00539	523 aa	Known RBP	4.84	□□□□□ -1.63
SED4	YCR067C	ESC8	Q08119	714 aa		4.84	□□□□□ -1.63
SED4	YCR067C	SYC1	Q08553	188 aa	Predicted RBP	4.84	□□□□□ -1.63
SED4	YCR067C	FEX1	Q08913	375 aa		4.84	□□□□□ -1.63
SED4	YCR067C	NUS1	Q12063	375 aa		4.84	□□□□□ -1.63
SED4	YCR067C	AEP3	Q12089	606 aa		4.84	□□□□□ -1.63
SED4	YCR067C	PSF1	Q12488	208 aa		4.84	□□□□□ -1.63
SED4	YCR067C	TSC13	Q99190	310 aa		4.84	□□□□□ -1.63
SED4	YCR067C	SWI5	P08153	709 aa		4.83	□□□□□ -1.64
SED4	YCR067C	RAM1	P22007	431 aa		4.83	□□□□□ -1.64
SED4	YCR067C	MSN2	P33748	704 aa		4.83	□□□□□ -1.64
SED4	YCR067C	MAK5	P38112	773 aa	Predicted RBP	4.83	□□□□□ -1.64
SED4	YCR067C	MSC7	P38694	644 aa		4.83	□□□□□ -1.64
SED4	YCR067C	YAP1801	P38856	637 aa		4.83	□□□□□ -1.64
SED4	YCR067C	MLH1	P38920	769 aa		4.83	□□□□□ -1.64
SED4	YCR067C	MEP1	P40260	492 aa		4.83	□□□□□ -1.64
SED4	YCR067C	PHB1	P40961	287 aa		4.83	□□□□□ -1.64
SED4	YCR067C	HMS2	P47175	358 aa		4.83	□□□□□ -1.64
SED4	YCR067C	NUP100	Q02629	959 aa		4.83	□□□□□ -1.64
SED4	YCR067C	SCS7	Q03529	384 aa		4.83	□□□□□ -1.64
SED4	YCR067C	MFB1	Q04922	465 aa		4.83	□□□□□ -1.64
SED4	YCR067C	NUT2	Q06213	157 aa		4.83	□□□□□ -1.64
SED4	YCR067C	YLR352W	Q06479	807 aa		4.83	□□□□□ -1.64
SED4	YCR067C	RCL1	Q08096	367 aa	Predicted RBP	4.83	□□□□□ -1.64
SED4	YCR067C	REC8	Q12188	680 aa		4.83	□□□□□ -1.64
SED4	YCR067C	SFG1	Q12507	346 aa		4.83	□□□□□ -1.64
SED4	YCR067C	YPR096C	O13587	100 aa		4.83	□□□□□ -1.64
SED4	YCR067C	MRPL33	P20084	86 aa		4.83	□□□□□ -1.64
SED4	YCR067C	PGS1	P25578	521 aa		4.83	□□□□□ -1.64
SED4	YCR067C	RAD55	P38953	406 aa		4.83	□□□□□ -1.64
SED4	YCR067C	MIT1	P40002	666 aa		4.83	□□□□□ -1.64
SED4	YCR067C	BUR6	P40096	142 aa		4.83	□□□□□ -1.64
SED4	YCR067C	SOK1	P40317	901 aa		4.83	□□□□□ -1.64
SED4	YCR067C	DLD2	P46681	530 aa	Known RBP	4.83	□□□□□ -1.64
SED4	YCR067C	IPI3	P53877	555 aa		4.83	□□□□□ -1.64
SED4	YCR067C	PET117	Q02771	107 aa		4.83	□□□□□ -1.64
SED4	YCR067C	MAK3	Q03503	176 aa		4.83	□□□□□ -1.64
SED4	YCR067C	YDR056C	Q12025	205 aa		4.83	□□□□□ -1.64
SED4	YCR067C	SIA1	Q12212	622 aa		4.83	□□□□□ -1.64
SED4	YCR067C	YDL199C	Q12407	687 aa		4.83	□□□□□ -1.64
SED4	YCR067C	SPS2	P08459	502 aa		4.83	□□□□□ -1.64
SED4	YCR067C	CKS1	P20486	150 aa	Known RBP	4.83	□□□□□ -1.64
SED4	YCR067C	SLM5	P25345	492 aa	Known RBP	4.83	□□□□□ -1.64
SED4	YCR067C	RMA1	P36001	430 aa	Known RBP	4.83	□□□□□ -1.64
SED4	YCR067C	APD1	P38281	316 aa		4.83	□□□□□ -1.64
SED4	YCR067C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
SED4	YCR067C	OSH7	P38755	437 aa		4.83	□□□□□ -1.64
SED4	YCR067C	BIG1	P38813	335 aa		4.83	□□□□□ -1.64
SED4	YCR067C	RET2	P43621	546 aa		4.83	□□□□□ -1.64
SED4	YCR067C	PMT4	P46971	762 aa		4.83	□□□□□ -1.64
SED4	YCR067C	EXG2	P52911	562 aa		4.83	□□□□□ -1.64
SED4	YCR067C	CAF40	P53829	373 aa		4.83	□□□□□ -1.64
SED4	YCR067C	NHP10	Q03435	203 aa		4.83	□□□□□ -1.64
SED4	YCR067C	MSC2	Q03455	724 aa		4.83	□□□□□ -1.64
SED4	YCR067C	YMD8	Q03697	442 aa		4.83	□□□□□ -1.64
SED4	YCR067C	PEX27	Q08580	376 aa		4.83	□□□□□ -1.64
SED4	YCR067C	PHO4	P07270	312 aa	Known RBP	4.82	□□□□□ -1.64
SED4	YCR067C	CLN2	P20438	545 aa		4.82	□□□□□ -1.64
SED4	YCR067C	RRP7	P25368	297 aa	Predicted RBP	4.82	□□□□□ -1.64
SED4	YCR067C	BIO2	P32451	375 aa		4.82	□□□□□ -1.64
SED4	YCR067C	CDC5	P32562	705 aa		4.82	□□□□□ -1.64
SED4	YCR067C	MRS6	P32864	603 aa	Known RBP	4.82	□□□□□ -1.64
SED4	YCR067C	THI80	P35202	319 aa		4.82	□□□□□ -1.64
SED4	YCR067C	GEM1	P39722	662 aa		4.82	□□□□□ -1.64
SED4	YCR067C	ERG10	P41338	398 aa	Known RBP	4.82	□□□□□ -1.64
SED4	YCR067C	PFD1	P46988	109 aa		4.82	□□□□□ -1.64
SED4	YCR067C	JHD2	P47156	728 aa	Predicted RBP	4.82	□□□□□ -1.64
SED4	YCR067C	UPF3	P48412	387 aa	Known RBP	4.82	□□□□□ -1.64
SED4	YCR067C	SNX41	Q04053	625 aa		4.82	□□□□□ -1.64
SED4	YCR067C	YHC1	Q05900	231 aa	Known RBP	4.82	□□□□□ -1.64
SED4	YCR067C	SWC7	Q06707	132 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms