RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeast

Gene PRE7, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRE7	YBL041W	YOL107W	Q12239	342 aa		4.88	□□□□□ -1.63
PRE7	YBL041W	FRE7	Q12333	620 aa		4.88	□□□□□ -1.63
PRE7	YBL041W	PST1	Q12355	444 aa		4.88	□□□□□ -1.63
PRE7	YBL041W	CDC21	P06785	304 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	GAL7	P08431	366 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	RPB2	P08518	1224 aa	Known RBP	4.87	□□□□□ -1.63
PRE7	YBL041W	ADH4	P10127	382 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	TYR1	P20049	452 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	HOP1	P20050	605 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	MRPL25	P23369	157 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	YCL002C	P25565	263 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	IMG1	P25626	169 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	BUB3	P26449	341 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	MEI5	P32489	222 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	YME1	P32795	747 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	CYM1	P32898	989 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	YKL100C	P34248	587 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	ETR1	P38071	380 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	SPP381	P38282	291 aa	Predicted RBP	4.87	□□□□□ -1.63
PRE7	YBL041W	TDP1	P38319	544 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	CCT2	P39076	527 aa	Known RBP	4.87	□□□□□ -1.63
PRE7	YBL041W	SSP120	P39931	234 aa	Known RBP	4.87	□□□□□ -1.63
PRE7	YBL041W	FAU1	P40099	211 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	YJR149W	P47177	404 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	SGF73	P53165	657 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	YGR015C	P53208	328 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	CLD1	P53264	445 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	AAT1	Q01802	451 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	VPS60	Q03390	229 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	NHP10	Q03435	203 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	VHS1	Q03785	461 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	LRS4	Q04087	347 aa	Known RBP	4.87	□□□□□ -1.63
PRE7	YBL041W	YMR034C	Q05131	434 aa	Predicted RBP	4.87	□□□□□ -1.63
PRE7	YBL041W	YLR177W	Q06251	628 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	YET3	Q07451	203 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	IRC13	Q08630	104 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	YDR056C	Q12025	205 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	YOR114W	Q12219	294 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	YLR111W	Q12528	110 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	YMR030W-A	Q3E760	96 aa		4.87	□□□□□ -1.63
PRE7	YBL041W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
PRE7	YBL041W	RPB4	P20433	221 aa	Predicted RBP	4.86	□□□□□ -1.63
PRE7	YBL041W	RPO26	P20435	155 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	SEC14	P24280	304 aa	Known RBP	4.86	□□□□□ -1.63
PRE7	YBL041W	MRPL15	P36523	253 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	INM1	P38710	295 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	AXL2	P38928	823 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	NPT1	P39683	429 aa	Known RBP	4.86	□□□□□ -1.63
PRE7	YBL041W	NDE1	P40215	560 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	HOS4	P40480	1083 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	YJR039W	P47107	1121 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	PMT3	P47190	753 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	TIS11	P47977	285 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	ASK10	P48361	1146 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	MDM34	P53083	459 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	YGR250C	P53316	781 aa	Known RBP	4.86	□□□□□ -1.63
PRE7	YBL041W	LSC1	P53598	329 aa	Known RBP	4.86	□□□□□ -1.63
PRE7	YBL041W	YNL058C	P53947	316 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	PRO2	P54885	456 aa	Known RBP	4.86	□□□□□ -1.63
PRE7	YBL041W	GOT1	Q03554	138 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	TRS23	Q03784	219 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	CRR1	Q05790	422 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	CRN1	Q06440	651 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	UBX3	Q12229	455 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	RRP42	Q12277	265 aa	Predicted RBP	4.86	□□□□□ -1.63
PRE7	YBL041W	GLE1	Q12315	538 aa		4.86	□□□□□ -1.63
PRE7	YBL041W	BRR1	Q99177	341 aa	Predicted RBP	4.86	□□□□□ -1.63
PRE7	YBL041W	PNO1	Q99216	274 aa	Known RBP	4.86	□□□□□ -1.63
PRE7	YBL041W	TRA1	P38811	3744 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	STE3	P06783	470 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	BCY1	P07278	416 aa	Known RBP	4.85	□□□□□ -1.63
PRE7	YBL041W	SEC15	P22224	910 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	MVD1	P32377	396 aa	Known RBP	4.85	□□□□□ -1.63
PRE7	YBL041W	PTM1	P32857	523 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	REV7	P38927	245 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	GGC1	P38988	300 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	YER034W	P40022	185 aa	Known RBP	4.85	□□□□□ -1.63
PRE7	YBL041W	EMP65	P40085	556 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	YIL086C	P40503	102 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	STB2	P46679	850 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	ZIP2	P53061	704 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	ERG26	P53199	349 aa	Known RBP	4.85	□□□□□ -1.63
PRE7	YBL041W	SHY1	P53266	389 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	YGR266W	P53326	701 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	NRG1	Q03125	231 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	TAF12	Q03761	539 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	HPT1	Q04178	221 aa	Known RBP	4.85	□□□□□ -1.63
PRE7	YBL041W	RRB1	Q04225	511 aa	Known RBP	4.85	□□□□□ -1.63
PRE7	YBL041W	TAF11	Q04226	346 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	BUD22	Q04347	519 aa	Known RBP	4.85	□□□□□ -1.63
PRE7	YBL041W	RSF1	Q05043	376 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	ASM4	Q05166	528 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	VAM6	Q07468	1049 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	MDY2	Q12285	212 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	RGS2	Q99188	309 aa		4.85	□□□□□ -1.63
PRE7	YBL041W	YLR415C	O13578	112 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	SSC1	P0CS90	654 aa	Known RBP	4.84	□□□□□ -1.63
PRE7	YBL041W	LDB16	P25587	256 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	AAD3	P25612	363 aa		4.84	□□□□□ -1.63
PRE7	YBL041W	CRM1	P30822	1084 aa	Known RBP	4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms