RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 MPHOSPH6Q99547 160 aaKnown RBP17.13■□□□□ 0.33
UBXN1-218ENST00000616865 SH2B1Q9NRF2 756 aaPredicted RBP17.13■□□□□ 0.33
UBXN1-218ENST00000616865 PTPRSQ13332 1948 aa17.12■□□□□ 0.33
UBXN1-218ENST00000616865 KLRF2D3W0D1 207 aa17.12■□□□□ 0.33
UBXN1-218ENST00000616865 SNHG28P0DPA3 235 aa17.12■□□□□ 0.33
UBXN1-218ENST00000616865 RFC2P35250 354 aa17.12■□□□□ 0.33
UBXN1-218ENST00000616865 FAM47CQ5HY64 1035 aa17.12■□□□□ 0.33
UBXN1-218ENST00000616865 DEFB128Q7Z7B8 93 aa17.12■□□□□ 0.33
UBXN1-218ENST00000616865 DNERQ8NFT8 737 aa17.12■□□□□ 0.33
UBXN1-218ENST00000616865 SCFD2Q8WU76 684 aa17.12■□□□□ 0.33
UBXN1-218ENST00000616865 UHRF1Q96T88 793 aaPredicted RBP17.12■□□□□ 0.33
UBXN1-218ENST00000616865 LZTS2Q9BRK4 669 aa17.12■□□□□ 0.33
UBXN1-218ENST00000616865 COL4A4P53420 1690 aaPredicted RBP17.11■□□□□ 0.33
UBXN1-218ENST00000616865 A6NJR5 290 aa17.11■□□□□ 0.33
UBXN1-218ENST00000616865 PITPNM1O00562 1244 aa17.11■□□□□ 0.33
UBXN1-218ENST00000616865 PFKFB2O60825 505 aa17.11■□□□□ 0.33
UBXN1-218ENST00000616865 CA3P07451 260 aa17.11■□□□□ 0.33
UBXN1-218ENST00000616865 ACTN1P12814 892 aa17.11■□□□□ 0.33
UBXN1-218ENST00000616865 COL9A1P20849 921 aa17.11■□□□□ 0.33
UBXN1-218ENST00000616865 ANP32AP39687 249 aaKnown RBP17.11■□□□□ 0.33
UBXN1-218ENST00000616865 NBPF20Q3BBV1 942 aa17.11■□□□□ 0.33
UBXN1-218ENST00000616865 NFRKBQ6P4R8 1299 aa17.11■□□□□ 0.33
UBXN1-218ENST00000616865 MICALL1Q8N3F8 863 aa17.11■□□□□ 0.33
UBXN1-218ENST00000616865 SLC9A7Q96T83 725 aa17.11■□□□□ 0.33
UBXN1-218ENST00000616865 TSPYL2Q9H2G4 693 aaPredicted RBP17.11■□□□□ 0.33
UBXN1-218ENST00000616865 MAD2L2Q9UI95 211 aa17.11■□□□□ 0.33
UBXN1-218ENST00000616865 TRANK1O15050 2925 aa17.11■□□□□ 0.33
UBXN1-218ENST00000616865 KIAA1217Q5T5P2 1943 aa17.1■□□□□ 0.33
UBXN1-218ENST00000616865 PALM3A6NDB9 673 aaPredicted RBP17.1■□□□□ 0.33
UBXN1-218ENST00000616865 KPNA6O60684 536 aa17.1■□□□□ 0.33
UBXN1-218ENST00000616865 CD2BP2O95400 341 aaKnown RBP17.1■□□□□ 0.33
UBXN1-218ENST00000616865 PTPN11Q06124 597 aaPredicted RBP17.1■□□□□ 0.33
UBXN1-218ENST00000616865 BECN1Q14457 450 aa17.1■□□□□ 0.33
UBXN1-218ENST00000616865 ME3Q16798 604 aa17.1■□□□□ 0.33
UBXN1-218ENST00000616865 STAG2Q8N3U4 1231 aa17.1■□□□□ 0.33
UBXN1-218ENST00000616865 NECAB1Q8N987 351 aa17.1■□□□□ 0.33
UBXN1-218ENST00000616865 PPP1R13LQ8WUF5 828 aa17.1■□□□□ 0.33
UBXN1-218ENST00000616865 COPS5Q92905 334 aa17.1■□□□□ 0.33
UBXN1-218ENST00000616865 SNX21Q969T3 373 aa17.1■□□□□ 0.33
UBXN1-218ENST00000616865 UBA5Q9GZZ9 404 aa17.1■□□□□ 0.33
UBXN1-218ENST00000616865 NCOA5Q9HCD5 579 aaKnown RBP17.1■□□□□ 0.33
UBXN1-218ENST00000616865 CDKL5O76039 1030 aa17.09■□□□□ 0.33
UBXN1-218ENST00000616865 ARIH2O95376 493 aa17.09■□□□□ 0.33
UBXN1-218ENST00000616865 LARGE1O95461 756 aa17.09■□□□□ 0.33
UBXN1-218ENST00000616865 IQCF3P0C7M6 154 aa17.09■□□□□ 0.33
UBXN1-218ENST00000616865 TXNP10599 105 aaKnown RBP17.09■□□□□ 0.33
UBXN1-218ENST00000616865 AKAP17AQ02040 695 aaKnown RBP17.09■□□□□ 0.33
UBXN1-218ENST00000616865 USH1GQ495M9 461 aa17.09■□□□□ 0.33
UBXN1-218ENST00000616865 CCDC82Q8N4S0 544 aa17.09■□□□□ 0.33
UBXN1-218ENST00000616865 TMX3Q96JJ7 454 aa17.09■□□□□ 0.33
UBXN1-218ENST00000616865 VAT1LQ9HCJ6 419 aa17.09■□□□□ 0.33
UBXN1-218ENST00000616865 TCF20Q9UGU0 1960 aaKnown RBP17.08■□□□□ 0.33
UBXN1-218ENST00000616865 MYH6P13533 1939 aa17.08■□□□□ 0.33
UBXN1-218ENST00000616865 NID2Q14112 1375 aa17.08■□□□□ 0.32
UBXN1-218ENST00000616865 B4DLN1 442 aa17.08■□□□□ 0.32
UBXN1-218ENST00000616865 K7ELQ4 463 aaPredicted RBP17.08■□□□□ 0.32
UBXN1-218ENST00000616865 PLEKHA8P1O95397 391 aa17.08■□□□□ 0.32
UBXN1-218ENST00000616865 POU3F3P20264 500 aaPredicted RBP17.08■□□□□ 0.32
UBXN1-218ENST00000616865 CDC27P30260 824 aa17.08■□□□□ 0.32
UBXN1-218ENST00000616865 ADD1P35611 737 aaKnown RBP17.08■□□□□ 0.32
UBXN1-218ENST00000616865 MRPL12P52815 198 aaKnown RBP17.08■□□□□ 0.32
UBXN1-218ENST00000616865 BFSP2Q13515 415 aa17.08■□□□□ 0.32
UBXN1-218ENST00000616865 TMTC3Q6ZXV5 915 aa17.08■□□□□ 0.32
UBXN1-218ENST00000616865 CCDC83Q8IWF9 413 aa17.08■□□□□ 0.32
UBXN1-218ENST00000616865 RETREG2Q8NC44 543 aa17.08■□□□□ 0.32
UBXN1-218ENST00000616865 PHOSPHO2Q8TCD6 241 aa17.08■□□□□ 0.32
UBXN1-218ENST00000616865 GTF3C6Q969F1 213 aa17.08■□□□□ 0.32
UBXN1-218ENST00000616865 NOD1Q9Y239 953 aa17.08■□□□□ 0.32
UBXN1-218ENST00000616865 TET1Q8NFU7 2136 aa17.08■□□□□ 0.32
UBXN1-218ENST00000616865 RFXAPO00287 272 aa17.07■□□□□ 0.32
UBXN1-218ENST00000616865 GTPBP6O43824 516 aaPredicted RBP17.07■□□□□ 0.32
UBXN1-218ENST00000616865 HSP90AA1P07900 732 aaKnown RBP17.07■□□□□ 0.32
UBXN1-218ENST00000616865 TFF2Q03403 129 aa17.07■□□□□ 0.32
UBXN1-218ENST00000616865 SCRN1Q12765 414 aa17.07■□□□□ 0.32
UBXN1-218ENST00000616865 TRIM22Q8IYM9 498 aa17.07■□□□□ 0.32
UBXN1-218ENST00000616865 CMTR1Q8N1G2 835 aaKnown RBP17.07■□□□□ 0.32
UBXN1-218ENST00000616865 RGS22Q8NE09 1264 aa17.07■□□□□ 0.32
UBXN1-218ENST00000616865 PIBF1Q8WXW3 757 aa17.07■□□□□ 0.32
UBXN1-218ENST00000616865 RRP36Q96EU6 259 aaKnown RBP17.07■□□□□ 0.32
UBXN1-218ENST00000616865 CPVLQ9H3G5 476 aa17.07■□□□□ 0.32
UBXN1-218ENST00000616865 CERS4Q9HA82 394 aa17.07■□□□□ 0.32
UBXN1-218ENST00000616865 TSHZ2Q9NRE2 1034 aa17.07■□□□□ 0.32
UBXN1-218ENST00000616865 SEC63Q9UGP8 760 aaKnown RBP17.07■□□□□ 0.32
UBXN1-218ENST00000616865 MTCH2Q9Y6C9 303 aa17.07■□□□□ 0.32
UBXN1-218ENST00000616865 TRIP12Q14669 1992 aaPredicted RBP17.07■□□□□ 0.32
UBXN1-218ENST00000616865 EPOPA6NHQ4 379 aa17.06■□□□□ 0.32
UBXN1-218ENST00000616865 BAIAP3O94812 1187 aa17.06■□□□□ 0.32
UBXN1-218ENST00000616865 MMP3P08254 477 aa17.06■□□□□ 0.32
UBXN1-218ENST00000616865 TAP1Q03518 808 aa17.06■□□□□ 0.32
UBXN1-218ENST00000616865 SSRP1Q08945 709 aaKnown RBP17.06■□□□□ 0.32
UBXN1-218ENST00000616865 CDC37Q16543 378 aaPredicted RBP17.06■□□□□ 0.32
UBXN1-218ENST00000616865 AAK1Q2M2I8 961 aa17.06■□□□□ 0.32
UBXN1-218ENST00000616865 CCDC62Q6P9F0 684 aa17.06■□□□□ 0.32
UBXN1-218ENST00000616865 HERC6Q8IVU3 1022 aa17.06■□□□□ 0.32
UBXN1-218ENST00000616865 ADGRF4Q8IZF3 695 aa17.06■□□□□ 0.32
UBXN1-218ENST00000616865 SRBD1Q8N5C6 995 aaKnown RBP17.06■□□□□ 0.32
UBXN1-218ENST00000616865 SPZ1Q9BXG8 430 aa17.06■□□□□ 0.32
UBXN1-218ENST00000616865 FTOQ9C0B1 505 aaKnown RBP eCLIP17.06■□□□□ 0.32
UBXN1-218ENST00000616865 MAF1Q9H063 256 aa17.06■□□□□ 0.32
UBXN1-218ENST00000616865 FAM217BQ9NTX9 383 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms