RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 TGFB3P10600 412 aa21.64■■□□□ 1.05
PNKP-213ENST00000599543 UBA1P22314 1058 aaKnown RBP21.64■■□□□ 1.05
PNKP-213ENST00000599543 MFSD10Q14728 455 aa21.64■■□□□ 1.05
PNKP-213ENST00000599543 KIAA0753Q2KHM9 967 aa21.64■■□□□ 1.05
PNKP-213ENST00000599543 CELF3Q5SZQ8 465 aaKnown RBP21.64■■□□□ 1.05
PNKP-213ENST00000599543 MYSM1Q5VVJ2 828 aa21.64■■□□□ 1.05
PNKP-213ENST00000599543 USP38Q8NB14 1042 aa21.64■■□□□ 1.05
PNKP-213ENST00000599543 SLC9A7Q96T83 725 aa21.64■■□□□ 1.05
PNKP-213ENST00000599543 MAP3K14Q99558 947 aa21.64■■□□□ 1.05
PNKP-213ENST00000599543 MYL10Q9BUA6 226 aa21.64■■□□□ 1.05
PNKP-213ENST00000599543 HDAC6Q9UBN7 1215 aa21.64■■□□□ 1.05
PNKP-213ENST00000599543 SEC63Q9UGP8 760 aaKnown RBP21.64■■□□□ 1.05
PNKP-213ENST00000599543 DOCK5Q9H7D0 1870 aa21.64■■□□□ 1.05
PNKP-213ENST00000599543 MUC3AQ02505 3323 aa21.63■■□□□ 1.05
PNKP-213ENST00000599543 TRANK1O15050 2925 aa21.63■■□□□ 1.05
PNKP-213ENST00000599543 PRC1O43663 620 aa21.63■■□□□ 1.05
PNKP-213ENST00000599543 PPFIA4O75335 1185 aa21.63■■□□□ 1.05
PNKP-213ENST00000599543 MYOGP15173 224 aa21.63■■□□□ 1.05
PNKP-213ENST00000599543 SELPP16109 830 aa21.63■■□□□ 1.05
PNKP-213ENST00000599543 MCM5P33992 734 aa21.63■■□□□ 1.05
PNKP-213ENST00000599543 GNPTABQ3T906 1256 aa21.63■■□□□ 1.05
PNKP-213ENST00000599543 NFXL1Q6ZNB6 911 aa21.63■■□□□ 1.05
PNKP-213ENST00000599543 RRP36Q96EU6 259 aaKnown RBP21.63■■□□□ 1.05
PNKP-213ENST00000599543 CTAGE1Q96RT6 745 aa21.63■■□□□ 1.05
PNKP-213ENST00000599543 MTA3Q9BTC8 594 aa21.63■■□□□ 1.05
PNKP-213ENST00000599543 SPZ1Q9BXG8 430 aa21.63■■□□□ 1.05
PNKP-213ENST00000599543 LSG1Q9H089 658 aaKnown RBP21.63■■□□□ 1.05
PNKP-213ENST00000599543 CCDC69A6NI79 296 aa21.62■■□□□ 1.05
PNKP-213ENST00000599543 BAIAP3O94812 1187 aa21.62■■□□□ 1.05
PNKP-213ENST00000599543 HOXD8P13378 290 aaPredicted RBP21.62■■□□□ 1.05
PNKP-213ENST00000599543 IGFBP4P22692 258 aa21.62■■□□□ 1.05
PNKP-213ENST00000599543 SP2Q02086 613 aa21.62■■□□□ 1.05
PNKP-213ENST00000599543 HSDL1Q3SXM5 330 aa21.62■■□□□ 1.05
PNKP-213ENST00000599543 LRRC8DQ7L1W4 858 aa21.62■■□□□ 1.05
PNKP-213ENST00000599543 PPM1EQ8WY54 764 aa21.62■■□□□ 1.05
PNKP-213ENST00000599543 ZFP91Q96JP5 570 aaPredicted RBP21.62■■□□□ 1.05
PNKP-213ENST00000599543 MLXIPQ9HAP2 919 aa21.62■■□□□ 1.05
PNKP-213ENST00000599543 PTPRSQ13332 1948 aa21.62■■□□□ 1.05
PNKP-213ENST00000599543 FRMPD4Q14CM0 1322 aa21.61■■□□□ 1.05
PNKP-213ENST00000599543 HAS3O00219 553 aa21.61■■□□□ 1.05
PNKP-213ENST00000599543 STAM2O75886 525 aa21.61■■□□□ 1.05
PNKP-213ENST00000599543 PARNO95453 639 aaKnown RBP21.61■■□□□ 1.05
PNKP-213ENST00000599543 RBL2Q08999 1139 aa21.61■■□□□ 1.05
PNKP-213ENST00000599543 ADGRE1Q14246 886 aa21.61■■□□□ 1.05
PNKP-213ENST00000599543 TMTC2Q8N394 836 aa21.61■■□□□ 1.05
PNKP-213ENST00000599543 PHOSPHO2Q8TCD6 241 aa21.61■■□□□ 1.05
PNKP-213ENST00000599543 DHX38Q92620 1227 aaKnown RBP21.61■■□□□ 1.05
PNKP-213ENST00000599543 CUL5Q93034 780 aa21.61■■□□□ 1.05
PNKP-213ENST00000599543 TMEM87BQ96K49 555 aa21.61■■□□□ 1.05
PNKP-213ENST00000599543 LZTS2Q9BRK4 669 aa21.61■■□□□ 1.05
PNKP-213ENST00000599543 SH2B2O14492 632 aaPredicted RBP21.6■■□□□ 1.05
PNKP-213ENST00000599543 SLC27A2O14975 620 aa21.6■■□□□ 1.05
PNKP-213ENST00000599543 CA3P07451 260 aa21.6■■□□□ 1.05
PNKP-213ENST00000599543 SMARCA1P28370 1054 aa21.6■■□□□ 1.05
PNKP-213ENST00000599543 KCNJ6P48051 423 aa21.6■■□□□ 1.05
PNKP-213ENST00000599543 GNAQP50148 359 aa21.6■■□□□ 1.05
PNKP-213ENST00000599543 SMARCC2Q8TAQ2 1214 aa21.6■■□□□ 1.05
PNKP-213ENST00000599543 GPKOWQ92917 476 aaPredicted RBP eCLIP21.6■■□□□ 1.05
PNKP-213ENST00000599543 ANO2Q9NQ90 1003 aa21.6■■□□□ 1.05
PNKP-213ENST00000599543 NOP56O00567 594 aaKnown RBP21.59■■□□□ 1.05
PNKP-213ENST00000599543 CKBP12277 381 aa21.59■■□□□ 1.05
PNKP-213ENST00000599543 PTK7Q13308 1070 aa21.59■■□□□ 1.05
PNKP-213ENST00000599543 CREB3L3Q68CJ9 461 aa21.59■■□□□ 1.05
PNKP-213ENST00000599543 REV3LO60673 3130 aa21.59■■□□□ 1.05
PNKP-213ENST00000599543 XIRP2A4UGR9 3374 aa21.58■■□□□ 1.05
PNKP-213ENST00000599543 KIF28PB7ZC32 967 aa21.58■■□□□ 1.05
PNKP-213ENST00000599543 PLEKHA8P1O95397 391 aa21.58■■□□□ 1.05
PNKP-213ENST00000599543 CALM1P0DP23 149 aa21.58■■□□□ 1.05
PNKP-213ENST00000599543 CALM2P0DP24 149 aa21.58■■□□□ 1.05
PNKP-213ENST00000599543 CALM3P0DP25 149 aa21.58■■□□□ 1.05
PNKP-213ENST00000599543 MRPS9P82933 396 aaKnown RBP21.58■■□□□ 1.05
PNKP-213ENST00000599543 HERC6Q8IVU3 1022 aa21.58■■□□□ 1.05
PNKP-213ENST00000599543 SYMPKQ92797 1274 aaKnown RBP21.58■■□□□ 1.05
PNKP-213ENST00000599543 INPP4AQ96PE3 977 aaPredicted RBP21.58■■□□□ 1.05
PNKP-213ENST00000599543 C16orf70Q9BSU1 422 aa21.58■■□□□ 1.05
PNKP-213ENST00000599543 SLC12A7Q9Y666 1083 aa21.58■■□□□ 1.05
PNKP-213ENST00000599543 KAT6AQ92794 2004 aa21.57■■□□□ 1.04
PNKP-213ENST00000599543 FIBPO43427 364 aa21.57■■□□□ 1.04
PNKP-213ENST00000599543 RXRAP19793 462 aa21.57■■□□□ 1.04
PNKP-213ENST00000599543 ICAM3P32942 547 aa21.57■■□□□ 1.04
PNKP-213ENST00000599543 LIFRP42702 1097 aa21.57■■□□□ 1.04
PNKP-213ENST00000599543 NEDD9Q14511 834 aa21.57■■□□□ 1.04
PNKP-213ENST00000599543 CCDC85BQ15834 202 aaPredicted RBP21.57■■□□□ 1.04
PNKP-213ENST00000599543 CNKSR3Q6P9H4 555 aa21.57■■□□□ 1.04
PNKP-213ENST00000599543 USP17L6PQ6QN14 398 aa21.57■■□□□ 1.04
PNKP-213ENST00000599543 SRBD1Q8N5C6 995 aaKnown RBP21.57■■□□□ 1.04
PNKP-213ENST00000599543 RTEL1Q9NZ71 1219 aa21.57■■□□□ 1.04
PNKP-213ENST00000599543 PRRC2BQ5JSZ5 2229 aaKnown RBP21.56■■□□□ 1.04
PNKP-213ENST00000599543 H3BRB1 525 aa21.56■■□□□ 1.04
PNKP-213ENST00000599543 PIK3CDO00329 1044 aa21.56■■□□□ 1.04
PNKP-213ENST00000599543 CXCL10P02778 98 aa21.56■■□□□ 1.04
PNKP-213ENST00000599543 LGALS2P05162 132 aa21.56■■□□□ 1.04
PNKP-213ENST00000599543 WDR5P61964 334 aaKnown RBP21.56■■□□□ 1.04
PNKP-213ENST00000599543 ZNF200P98182 395 aaPredicted RBP21.56■■□□□ 1.04
PNKP-213ENST00000599543 NECTIN1Q15223 517 aa21.56■■□□□ 1.04
PNKP-213ENST00000599543 TJAP1Q5JTD0 557 aa21.56■■□□□ 1.04
PNKP-213ENST00000599543 PCNX4Q63HM2 1172 aa21.56■■□□□ 1.04
PNKP-213ENST00000599543 METTL7BQ6UX53 244 aa21.56■■□□□ 1.04
PNKP-213ENST00000599543 CMTR1Q8N1G2 835 aaKnown RBP21.56■■□□□ 1.04
PNKP-213ENST00000599543 TUT1Q9H6E5 874 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms