RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 TCP1P17987 556 aaKnown RBP18.68■□□□□ 0.58
PRKCSH-205ENST00000587327 EHHADHQ08426 723 aa18.68■□□□□ 0.58
PRKCSH-205ENST00000587327 PSMD2Q13200 908 aa18.68■□□□□ 0.58
PRKCSH-205ENST00000587327 DRC1Q96MC2 740 aa18.68■□□□□ 0.58
PRKCSH-205ENST00000587327 LRRC1Q9BTT6 524 aa18.68■□□□□ 0.58
PRKCSH-205ENST00000587327 ATP6V0A2Q9Y487 856 aa18.68■□□□□ 0.58
PRKCSH-205ENST00000587327 DAGLAQ9Y4D2 1042 aa18.68■□□□□ 0.58
PRKCSH-205ENST00000587327 POTEMA6NI47 508 aa18.67■□□□□ 0.58
PRKCSH-205ENST00000587327 PJA2O43164 708 aa18.67■□□□□ 0.58
PRKCSH-205ENST00000587327 TDP2O95551 362 aa18.67■□□□□ 0.58
PRKCSH-205ENST00000587327 PDHBP11177 359 aa18.67■□□□□ 0.58
PRKCSH-205ENST00000587327 MAGEA1P43355 309 aa18.67■□□□□ 0.58
PRKCSH-205ENST00000587327 ASTE1Q2TB18 679 aaPredicted RBP18.67■□□□□ 0.58
PRKCSH-205ENST00000587327 FOXR2Q6PJQ5 311 aa18.67■□□□□ 0.58
PRKCSH-205ENST00000587327 HDAC7Q8WUI4 952 aa18.67■□□□□ 0.58
PRKCSH-205ENST00000587327 DDX12PQ92771 950 aa18.67■□□□□ 0.58
PRKCSH-205ENST00000587327 EDEM3Q9BZQ6 932 aa18.67■□□□□ 0.58
PRKCSH-205ENST00000587327 LRRC27Q9C0I9 530 aa18.67■□□□□ 0.58
PRKCSH-205ENST00000587327 RIC8AQ9NPQ8 531 aa18.67■□□□□ 0.58
PRKCSH-205ENST00000587327 HYOU1Q9Y4L1 999 aa18.67■□□□□ 0.58
PRKCSH-205ENST00000587327 GOLGA6BA6NDN3 693 aa18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 ADCY7P51828 1080 aa18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 GTF2IP78347 998 aa18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 KRT79Q5XKE5 535 aa18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 NFRKBQ6P4R8 1299 aa18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 SLF2Q8IX21 1173 aa18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 COA7Q96BR5 231 aa18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 NUDT12Q9BQG2 462 aa18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 DMGDHQ9UI17 866 aaKnown RBP18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 TRIM66O15016 1216 aa18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 RIMBP2O15034 1052 aa18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 EZH2Q15910 746 aaKnown RBP18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 COL23A1Q86Y22 540 aaPredicted RBP18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 SNX29Q8TEQ0 813 aa18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 AKT1S1Q96B36 256 aa18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 HINFPQ9BQA5 517 aa18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 RASSF4Q9H2L5 321 aa18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 SALL4Q9UJQ4 1053 aa18.66■□□□□ 0.58
PRKCSH-205ENST00000587327 FRMPD2Q68DX3 1309 aaPredicted RBP18.65■□□□□ 0.58
PRKCSH-205ENST00000587327 SSU72P8A0A1W2PR75 194 aa18.65■□□□□ 0.58
PRKCSH-205ENST00000587327 MAPK8IP2Q13387 824 aaPredicted RBP18.65■□□□□ 0.58
PRKCSH-205ENST00000587327 TMEM119Q4V9L6 283 aa18.65■□□□□ 0.58
PRKCSH-205ENST00000587327 PDXDC1Q6P996 788 aa18.65■□□□□ 0.58
PRKCSH-205ENST00000587327 ARHGAP27Q6ZUM4 889 aa18.65■□□□□ 0.58
PRKCSH-205ENST00000587327 CACNA2D4Q7Z3S7 1137 aa18.65■□□□□ 0.58
PRKCSH-205ENST00000587327 KCNK18Q7Z418 384 aa18.65■□□□□ 0.58
PRKCSH-205ENST00000587327 C10orf67Q8IYJ2 551 aa18.65■□□□□ 0.58
PRKCSH-205ENST00000587327 GLIS3Q8NEA6 775 aa18.65■□□□□ 0.58
PRKCSH-205ENST00000587327 TSG101Q99816 390 aa18.65■□□□□ 0.58
PRKCSH-205ENST00000587327 ERCC3P19447 782 aa18.65■□□□□ 0.58
PRKCSH-205ENST00000587327 CXCR5P32302 372 aa18.65■□□□□ 0.58
PRKCSH-205ENST00000587327 GFPT1Q06210 699 aaPredicted RBP18.65■□□□□ 0.58
PRKCSH-205ENST00000587327 LRRC41Q15345 812 aa18.65■□□□□ 0.58
PRKCSH-205ENST00000587327 COA1Q9GZY4 146 aa18.65■□□□□ 0.58
PRKCSH-205ENST00000587327 ATP2B2Q01814 1243 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 KCNMA1Q12791 1236 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 ASPRV1Q53RT3 343 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 CCDC181Q5TID7 509 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 HGSNATQ68CP4 663 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 PPP4R3AQ6IN85 833 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 MYOCDQ8IZQ8 938 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 CERS5Q8N5B7 392 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 RNF10Q8N5U6 811 aaKnown RBP18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 PSMB7Q99436 277 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 MTMR4Q9NYA4 1195 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 ADAMTSL1Q8N6G6 1762 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 FKBP3Q00688 224 aaKnown RBP18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 RASSF7Q02833 373 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 SND1Q7KZF4 910 aaKnown RBP eCLIP18.64■□□□□ 0.576e-11■■■■■ 29.5
PRKCSH-205ENST00000587327 NLGN1Q8N2Q7 840 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 CCDC155Q8N6L0 562 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 ANKRD13CQ8N6S4 541 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 DNAJC19Q96DA6 116 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 NOX5Q96PH1 765 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 TLR10Q9BXR5 811 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 TANGO6Q9C0B7 1094 aa18.64■□□□□ 0.57
PRKCSH-205ENST00000587327 MYH10P35580 1976 aa18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 RBAK-RBAKDNI3L0D1 243 aa18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 SHOX2O60902 331 aaPredicted RBP18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 PPFIA4O75335 1185 aa18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 NPR1P16066 1061 aa18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 PAFAH1B1P43034 410 aa18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 MATR3P43243 847 aaKnown RBP eCLIP18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 SEPT2Q15019 361 aa18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 ECM1Q16610 540 aa18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 ZCWPW2Q504Y3 356 aa18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 GPIHBP1Q8IV16 184 aa18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 FAM76AQ8TAV0 307 aa18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 MTMR8Q96EF0 704 aa18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 STIM2Q9P246 746 aa18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 RSPH14Q9UHP6 348 aa18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 COL4A3BPQ9Y5P4 624 aa18.63■□□□□ 0.57
PRKCSH-205ENST00000587327 GOLGA6CA6NDK9 693 aa18.62■□□□□ 0.57
PRKCSH-205ENST00000587327 NCK2O43639 380 aa18.62■□□□□ 0.57
PRKCSH-205ENST00000587327 GOLGA6DP0CG33 693 aa18.62■□□□□ 0.57
PRKCSH-205ENST00000587327 SNHG28P0DPA3 235 aa18.62■□□□□ 0.57
PRKCSH-205ENST00000587327 SLC1A4P43007 532 aa18.62■□□□□ 0.57
PRKCSH-205ENST00000587327 SLC7A5Q01650 507 aa18.62■□□□□ 0.57
PRKCSH-205ENST00000587327 KLHDC7AQ5VTJ3 777 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms