RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 IKBKEQ14164 716 aa15.5■□□□□ 0.07
TRAF4-214ENST00000580073 KIAA0753Q2KHM9 967 aa15.5■□□□□ 0.07
TRAF4-214ENST00000580073 GNPTABQ3T906 1256 aa15.5■□□□□ 0.07
TRAF4-214ENST00000580073 RUFY2Q8WXA3 655 aa15.5■□□□□ 0.07
TRAF4-214ENST00000580073 COL20A1Q9P218 1284 aa15.5■□□□□ 0.07
TRAF4-214ENST00000580073 COL4A6Q14031 1691 aa15.5■□□□□ 0.07
TRAF4-214ENST00000580073 KLRF2D3W0D1 207 aa15.49■□□□□ 0.07
TRAF4-214ENST00000580073 SGSM2O43147 1006 aa15.49■□□□□ 0.07
TRAF4-214ENST00000580073 STAM2O75886 525 aa15.49■□□□□ 0.07
TRAF4-214ENST00000580073 ZNF286BP0CG31 522 aa15.49■□□□□ 0.07
TRAF4-214ENST00000580073 CCND2P30279 289 aa15.49■□□□□ 0.07
TRAF4-214ENST00000580073 PTH1RQ03431 593 aa15.49■□□□□ 0.07
TRAF4-214ENST00000580073 KAT2BQ92831 832 aa15.49■□□□□ 0.07
TRAF4-214ENST00000580073 PDCD2LQ9BRP1 358 aa15.49■□□□□ 0.07
TRAF4-214ENST00000580073 ALG1Q9BT22 464 aa15.49■□□□□ 0.07
TRAF4-214ENST00000580073 CERS4Q9HA82 394 aa15.49■□□□□ 0.07
TRAF4-214ENST00000580073 VAT1LQ9HCJ6 419 aa15.49■□□□□ 0.07
TRAF4-214ENST00000580073 HDAC6Q9UBN7 1215 aa15.49■□□□□ 0.07
TRAF4-214ENST00000580073 PCDHA1Q9Y5I3 950 aa15.49■□□□□ 0.07
TRAF4-214ENST00000580073 PPFIA4O75335 1185 aa15.48■□□□□ 0.07
TRAF4-214ENST00000580073 MYCLP12524 364 aaPredicted RBP15.48■□□□□ 0.07
TRAF4-214ENST00000580073 HOXD8P13378 290 aaPredicted RBP15.48■□□□□ 0.07
TRAF4-214ENST00000580073 RALYLQ86SE5 291 aaKnown RBP15.48■□□□□ 0.07
TRAF4-214ENST00000580073 HLA-CQ95604 372 aa15.48■□□□□ 0.07
TRAF4-214ENST00000580073 SPATA33Q96N06 139 aa15.48■□□□□ 0.07
TRAF4-214ENST00000580073 RAD9AQ99638 391 aa15.48■□□□□ 0.07
TRAF4-214ENST00000580073 GCOM1H8Y6P7 765 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-214ENST00000580073 HAS3O00219 553 aa15.47■□□□□ 0.07
TRAF4-214ENST00000580073 NOP56O00567 594 aaKnown RBP15.47■□□□□ 0.07
TRAF4-214ENST00000580073 CAND2O75155 1236 aa15.47■□□□□ 0.07
TRAF4-214ENST00000580073 GJB5O95377 273 aa15.47■□□□□ 0.07
TRAF4-214ENST00000580073 POLR2MP0CAP2 368 aa15.47■□□□□ 0.07
TRAF4-214ENST00000580073 PGM5Q15124 567 aa15.47■□□□□ 0.07
TRAF4-214ENST00000580073 STOX1Q6ZVD7 989 aa15.47■□□□□ 0.07
TRAF4-214ENST00000580073 PPP1R13LQ8WUF5 828 aa15.47■□□□□ 0.07
TRAF4-214ENST00000580073 TBC1D5Q92609 795 aa15.47■□□□□ 0.07
TRAF4-214ENST00000580073 DHX38Q92620 1227 aaKnown RBP15.47■□□□□ 0.07
TRAF4-214ENST00000580073 MTMR8Q96EF0 704 aa15.47■□□□□ 0.07
TRAF4-214ENST00000580073 TGS1Q96RS0 853 aaKnown RBP15.47■□□□□ 0.07
TRAF4-214ENST00000580073 CTAGE1Q96RT6 745 aa15.47■□□□□ 0.07
TRAF4-214ENST00000580073 ESYT1Q9BSJ8 1104 aa15.47■□□□□ 0.07
TRAF4-214ENST00000580073 MLXIPQ9HAP2 919 aa15.47■□□□□ 0.07
TRAF4-214ENST00000580073 U3KPZ7 1027 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-214ENST00000580073 LGR5O75473 907 aa15.46■□□□□ 0.07
TRAF4-214ENST00000580073 GGPS1O95749 300 aa15.46■□□□□ 0.07
TRAF4-214ENST00000580073 AMHP03971 560 aa15.46■□□□□ 0.07
TRAF4-214ENST00000580073 GNAT1P11488 350 aa15.46■□□□□ 0.07
TRAF4-214ENST00000580073 BMP1P13497 986 aa15.46■□□□□ 0.07
TRAF4-214ENST00000580073 GRB10Q13322 594 aa15.46■□□□□ 0.07
TRAF4-214ENST00000580073 GRM4Q14833 912 aa15.46■□□□□ 0.07
TRAF4-214ENST00000580073 SEC23AQ15436 765 aa15.46■□□□□ 0.07
TRAF4-214ENST00000580073 CELF3Q5SZQ8 465 aaKnown RBP15.46■□□□□ 0.07
TRAF4-214ENST00000580073 MYSM1Q5VVJ2 828 aa15.46■□□□□ 0.07
TRAF4-214ENST00000580073 HOMER1Q86YM7 354 aa15.46■□□□□ 0.07
TRAF4-214ENST00000580073 ZNF215Q9UL58 517 aaPredicted RBP15.46■□□□□ 0.07
TRAF4-214ENST00000580073 INSL6Q9Y581 213 aa15.46■□□□□ 0.07
TRAF4-214ENST00000580073 REV3LO60673 3130 aa15.45■□□□□ 0.06
TRAF4-214ENST00000580073 PALM3A6NDB9 673 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-214ENST00000580073 EPOPA6NHQ4 379 aa15.45■□□□□ 0.06
TRAF4-214ENST00000580073 RFXAPO00287 272 aa15.45■□□□□ 0.06
TRAF4-214ENST00000580073 NBNO60934 754 aa15.45■□□□□ 0.06
TRAF4-214ENST00000580073 UBA1P22314 1058 aaKnown RBP15.45■□□□□ 0.06
TRAF4-214ENST00000580073 KCNQ1P51787 676 aa15.45■□□□□ 0.06
TRAF4-214ENST00000580073 DEFB103AP81534 67 aa15.45■□□□□ 0.06
TRAF4-214ENST00000580073 TFF2Q03403 129 aa15.45■□□□□ 0.06
TRAF4-214ENST00000580073 NEDD9Q14511 834 aa15.45■□□□□ 0.06
TRAF4-214ENST00000580073 WTAPQ15007 396 aa15.45■□□□□ 0.06
TRAF4-214ENST00000580073 VSIG10LQ86VR7 867 aa15.45■□□□□ 0.06
TRAF4-214ENST00000580073 STAG2Q8N3U4 1231 aa15.45■□□□□ 0.06
TRAF4-214ENST00000580073 SAMD11Q96NU1 681 aa15.45■□□□□ 0.06
TRAF4-214ENST00000580073 MAD2L2Q9UI95 211 aa15.45■□□□□ 0.06
TRAF4-214ENST00000580073 C17orf102A2RUQ5 167 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 RSPH10B2B2RC85 870 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 OPLAHO14841 1288 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 IFIT3O14879 490 aaKnown RBP15.44■□□□□ 0.06
TRAF4-214ENST00000580073 CDC45O75419 566 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 RSPH10BP0C881 870 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 THPOP40225 353 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 ERVK-21P61565 698 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 HSDL1Q3SXM5 330 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 ZNF618Q5T7W0 954 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 SERINC5Q86VE9 423 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 NCOA7Q8NI08 942 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 GDPD5Q8WTR4 605 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 CUL5Q93034 780 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 USP26Q9BXU7 913 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 LSG1Q9H089 658 aaKnown RBP15.44■□□□□ 0.06
TRAF4-214ENST00000580073 RIOX1Q9H6W3 641 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 HCN4Q9Y3Q4 1203 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 TAF6LQ9Y6J9 622 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 BRWD1Q9NSI6 2320 aa15.44■□□□□ 0.06
TRAF4-214ENST00000580073 FRMPD4Q14CM0 1322 aa15.43■□□□□ 0.06
TRAF4-214ENST00000580073 PNMA6FA0A0J9YX94 578 aa15.43■□□□□ 0.06
TRAF4-214ENST00000580073 H3BRB1 525 aa15.43■□□□□ 0.06
TRAF4-214ENST00000580073 HOXA13P31271 388 aaPredicted RBP15.43■□□□□ 0.06
TRAF4-214ENST00000580073 PTPROQ16827 1216 aa15.43■□□□□ 0.06
TRAF4-214ENST00000580073 TRIM71Q2Q1W2 868 aaKnown RBP15.43■□□□□ 0.06
TRAF4-214ENST00000580073 CATIPQ7Z7H3 387 aa15.43■□□□□ 0.06
TRAF4-214ENST00000580073 FBXO22Q8NEZ5 403 aa15.43■□□□□ 0.06
TRAF4-214ENST00000580073 SEPT8Q92599 483 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms