RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 BCAS3Q9H6U6 928 aa20.39■□□□□ 0.85
CIITA-206ENST00000571190 IFIT3O14879 490 aaKnown RBP20.38■□□□□ 0.85
CIITA-206ENST00000571190 PTK7Q13308 1070 aa20.38■□□□□ 0.85
CIITA-206ENST00000571190 ADAMTS19Q8TE59 1207 aa20.38■□□□□ 0.85
CIITA-206ENST00000571190 TTC28Q96AY4 2481 aa20.38■□□□□ 0.85
CIITA-206ENST00000571190 LAMA4Q16363 1823 aa20.38■□□□□ 0.85
CIITA-206ENST00000571190 LCHNA4D1U4 455 aa20.37■□□□□ 0.85
CIITA-206ENST00000571190 E7EWF7 191 aa20.37■□□□□ 0.85
CIITA-206ENST00000571190 GCOM1H8Y6P7 765 aaPredicted RBP20.37■□□□□ 0.85
CIITA-206ENST00000571190 PPFIA4O75335 1185 aa20.37■□□□□ 0.85
CIITA-206ENST00000571190 GGPS1O95749 300 aa20.37■□□□□ 0.85
CIITA-206ENST00000571190 POLR2MP0CAP2 368 aa20.37■□□□□ 0.85
CIITA-206ENST00000571190 UBA1P22314 1058 aaKnown RBP20.37■□□□□ 0.85
CIITA-206ENST00000571190 ANTXR2P58335 489 aa20.37■□□□□ 0.85
CIITA-206ENST00000571190 DEFB103AP81534 67 aa20.37■□□□□ 0.85
CIITA-206ENST00000571190 TFF2Q03403 129 aa20.37■□□□□ 0.85
CIITA-206ENST00000571190 TRDNQ13061 729 aa20.37■□□□□ 0.85
CIITA-206ENST00000571190 MBTPS1Q14703 1052 aa20.37■□□□□ 0.85
CIITA-206ENST00000571190 CNKSR3Q6P9H4 555 aa20.37■□□□□ 0.85
CIITA-206ENST00000571190 ARNTL2Q8WYA1 636 aa20.37■□□□□ 0.85
CIITA-206ENST00000571190 C16orf70Q9BSU1 422 aa20.37■□□□□ 0.85
CIITA-206ENST00000571190 KATNAL1Q9BW62 490 aa20.37■□□□□ 0.85
CIITA-206ENST00000571190 SUPT16HQ9Y5B9 1047 aaKnown RBP20.37■□□□□ 0.85
CIITA-206ENST00000571190 U3KPZ7 1027 aaPredicted RBP20.37■□□□□ 0.85
CIITA-206ENST00000571190 PNMA6FA0A0J9YX94 578 aa20.36■□□□□ 0.85
CIITA-206ENST00000571190 LPXNO60711 386 aa20.36■□□□□ 0.85
CIITA-206ENST00000571190 BMP1P13497 986 aa20.36■□□□□ 0.85
CIITA-206ENST00000571190 ZNF618Q5T7W0 954 aa20.36■□□□□ 0.85
CIITA-206ENST00000571190 KCNV1Q6PIU1 500 aa20.36■□□□□ 0.85
CIITA-206ENST00000571190 FCHSD1Q86WN1 690 aa20.36■□□□□ 0.85
CIITA-206ENST00000571190 SPATA33Q96N06 139 aa20.36■□□□□ 0.85
CIITA-206ENST00000571190 KIF28PB7ZC32 967 aa20.35■□□□□ 0.85
CIITA-206ENST00000571190 SGSM2O43147 1006 aa20.35■□□□□ 0.85
CIITA-206ENST00000571190 TLL1O43897 1013 aa20.35■□□□□ 0.85
CIITA-206ENST00000571190 PARNO95453 639 aaKnown RBP20.35■□□□□ 0.85
CIITA-206ENST00000571190 TGFB3P10600 412 aa20.35■□□□□ 0.85
CIITA-206ENST00000571190 CCND2P30279 289 aa20.35■□□□□ 0.85
CIITA-206ENST00000571190 MRPS9P82933 396 aaKnown RBP20.35■□□□□ 0.85
CIITA-206ENST00000571190 IGDCC4Q8TDY8 1250 aa20.35■□□□□ 0.85
CIITA-206ENST00000571190 RUFY2Q8WXA3 655 aa20.35■□□□□ 0.85
CIITA-206ENST00000571190 MUC3AQ02505 3323 aa20.34■□□□□ 0.85
CIITA-206ENST00000571190 KCNJ6P48051 423 aa20.34■□□□□ 0.85
CIITA-206ENST00000571190 GRB10Q13322 594 aa20.34■□□□□ 0.85
CIITA-206ENST00000571190 WTAPQ15007 396 aa20.34■□□□□ 0.85
CIITA-206ENST00000571190 MB21D2Q8IYB1 491 aaPredicted RBP20.34■□□□□ 0.85
CIITA-206ENST00000571190 NCOA7Q8NI08 942 aa20.34■□□□□ 0.85
CIITA-206ENST00000571190 UHRF1Q96T88 793 aaPredicted RBP20.34■□□□□ 0.85
CIITA-206ENST00000571190 SCN5AQ14524 2016 aa20.34■□□□□ 0.85
CIITA-206ENST00000571190 FRMPD4Q14CM0 1322 aa20.33■□□□□ 0.85
CIITA-206ENST00000571190 ABHD14A-ACY1A0A1B0GW23 586 aa20.33■□□□□ 0.85
CIITA-206ENST00000571190 GTPBP6O43824 516 aaPredicted RBP20.33■□□□□ 0.85
CIITA-206ENST00000571190 HOXC8P31273 242 aa20.33■□□□□ 0.85
CIITA-206ENST00000571190 SEMA3FQ13275 785 aa20.33■□□□□ 0.85
CIITA-206ENST00000571190 MKRN4PQ13434 485 aaPredicted RBP20.33■□□□□ 0.85
CIITA-206ENST00000571190 SERINC5Q86VE9 423 aa20.33■□□□□ 0.85
CIITA-206ENST00000571190 MAP4K1Q92918 833 aa20.33■□□□□ 0.85
CIITA-206ENST00000571190 NECAB3Q96P71 396 aaPredicted RBP20.33■□□□□ 0.85
CIITA-206ENST00000571190 INPP4AQ96PE3 977 aaPredicted RBP20.33■□□□□ 0.85
CIITA-206ENST00000571190 TSPYL2Q9H2G4 693 aaPredicted RBP20.33■□□□□ 0.85
CIITA-206ENST00000571190 TELO2Q9Y4R8 837 aa20.33■□□□□ 0.85
CIITA-206ENST00000571190 ERICH2A1L162 156 aa20.32■□□□□ 0.84
CIITA-206ENST00000571190 GJB5O95377 273 aa20.32■□□□□ 0.84
CIITA-206ENST00000571190 KCNQ1P51787 676 aa20.32■□□□□ 0.84
CIITA-206ENST00000571190 TRAF1Q13077 416 aa20.32■□□□□ 0.84
CIITA-206ENST00000571190 COL9A3Q14050 684 aaPredicted RBP20.32■□□□□ 0.84
CIITA-206ENST00000571190 RALYLQ86SE5 291 aaKnown RBP20.32■□□□□ 0.84
CIITA-206ENST00000571190 PIBF1Q8WXW3 757 aa20.32■□□□□ 0.84
CIITA-206ENST00000571190 MLXIPQ9HAP2 919 aa20.32■□□□□ 0.84
CIITA-206ENST00000571190 ICAM3P32942 547 aa20.31■□□□□ 0.84
CIITA-206ENST00000571190 SKIV2LQ15477 1246 aaKnown RBP20.31■□□□□ 0.84
CIITA-206ENST00000571190 RAD9AQ99638 391 aa20.31■□□□□ 0.84
CIITA-206ENST00000571190 MYL10Q9BUA6 226 aa20.31■□□□□ 0.84
CIITA-206ENST00000571190 OSBPL7Q9BZF2 842 aa20.31■□□□□ 0.84
CIITA-206ENST00000571190 GBF1Q92538 1859 aa20.3■□□□□ 0.84
CIITA-206ENST00000571190 SPATA31C2B4DYI2 1134 aa20.3■□□□□ 0.84
CIITA-206ENST00000571190 H3BRB1 525 aa20.3■□□□□ 0.84
CIITA-206ENST00000571190 LGR5O75473 907 aa20.3■□□□□ 0.84
CIITA-206ENST00000571190 LGALS2P05162 132 aa20.3■□□□□ 0.84
CIITA-206ENST00000571190 IKBKEQ14164 716 aa20.3■□□□□ 0.84
CIITA-206ENST00000571190 SART3Q15020 963 aaKnown RBP20.3■□□□□ 0.84
CIITA-206ENST00000571190 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.3■□□□□ 0.84
CIITA-206ENST00000571190 CATIPQ7Z7H3 387 aa20.3■□□□□ 0.84
CIITA-206ENST00000571190 DBF4BQ8NFT6 615 aa20.3■□□□□ 0.84
CIITA-206ENST00000571190 ZBED2Q9BTP6 218 aa20.3■□□□□ 0.84
CIITA-206ENST00000571190 RNPEPQ9H4A4 650 aa20.3■□□□□ 0.84
CIITA-206ENST00000571190 TUT1Q9H6E5 874 aaKnown RBP20.3■□□□□ 0.84
CIITA-206ENST00000571190 LY9Q9HBG7 655 aa20.3■□□□□ 0.84
CIITA-206ENST00000571190 RTEL1Q9NZ71 1219 aa20.3■□□□□ 0.84
CIITA-206ENST00000571190 RBM8AQ9Y5S9 174 aaKnown RBP20.3■□□□□ 0.84
CIITA-206ENST00000571190 TANC1Q9C0D5 1861 aa20.3■□□□□ 0.84
CIITA-206ENST00000571190 SMIM10L2AP0DMW4 78 aa20.29■□□□□ 0.84
CIITA-206ENST00000571190 SMIM10L2BP0DMW5 78 aa20.29■□□□□ 0.84
CIITA-206ENST00000571190 THPOP40225 353 aa20.29■□□□□ 0.84
CIITA-206ENST00000571190 IRX6P78412 446 aaPredicted RBP20.29■□□□□ 0.84
CIITA-206ENST00000571190 MAP3K14Q99558 947 aa20.29■□□□□ 0.84
CIITA-206ENST00000571190 GPR20Q99678 358 aa20.29■□□□□ 0.84
CIITA-206ENST00000571190 SPZ1Q9BXG8 430 aa20.29■□□□□ 0.84
CIITA-206ENST00000571190 SUGCTQ9HAC7 445 aa20.29■□□□□ 0.84
CIITA-206ENST00000571190 C17orf102A2RUQ5 167 aa20.28■□□□□ 0.84
CIITA-206ENST00000571190 LINC01553A4QN01 128 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms