RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 SPATA33Q96N06 139 aa22.57■■□□□ 1.2
SLC48A1-207ENST00000549243 LZTS2Q9BRK4 669 aa22.57■■□□□ 1.2
SLC48A1-207ENST00000549243 HDAC6Q9UBN7 1215 aa22.57■■□□□ 1.2
SLC48A1-207ENST00000549243 MSRAQ9UJ68 235 aa22.57■■□□□ 1.2
SLC48A1-207ENST00000549243 SLC4A7Q9Y6M7 1214 aa22.57■■□□□ 1.2
SLC48A1-207ENST00000549243 PITPNM1O00562 1244 aa22.56■■□□□ 1.2
SLC48A1-207ENST00000549243 IQCF3P0C7M6 154 aa22.56■■□□□ 1.2
SLC48A1-207ENST00000549243 CALM1P0DP23 149 aa22.56■■□□□ 1.2
SLC48A1-207ENST00000549243 CALM2P0DP24 149 aa22.56■■□□□ 1.2
SLC48A1-207ENST00000549243 CALM3P0DP25 149 aa22.56■■□□□ 1.2
SLC48A1-207ENST00000549243 SMARCA1P28370 1054 aa22.56■■□□□ 1.2
SLC48A1-207ENST00000549243 MRPS9P82933 396 aaKnown RBP22.56■■□□□ 1.2
SLC48A1-207ENST00000549243 KIAA0753Q2KHM9 967 aa22.56■■□□□ 1.2
SLC48A1-207ENST00000549243 MICU3Q86XE3 530 aa22.56■■□□□ 1.2
SLC48A1-207ENST00000549243 CUL5Q93034 780 aa22.56■■□□□ 1.2
SLC48A1-207ENST00000549243 TCEANC2Q96MN5 208 aa22.56■■□□□ 1.2
SLC48A1-207ENST00000549243 CTAGE1Q96RT6 745 aa22.56■■□□□ 1.2
SLC48A1-207ENST00000549243 BCAS3Q9H6U6 928 aa22.56■■□□□ 1.2
SLC48A1-207ENST00000549243 RTEL1Q9NZ71 1219 aa22.56■■□□□ 1.2
SLC48A1-207ENST00000549243 CUL9Q8IWT3 2517 aa22.55■■□□□ 1.2
SLC48A1-207ENST00000549243 DLL1O00548 723 aa22.55■■□□□ 1.2
SLC48A1-207ENST00000549243 CDC45O75419 566 aa22.55■■□□□ 1.2
SLC48A1-207ENST00000549243 PFKMP08237 780 aa22.55■■□□□ 1.2
SLC48A1-207ENST00000549243 RABGGTBP53611 331 aa22.55■■□□□ 1.2
SLC48A1-207ENST00000549243 RAB30Q15771 203 aa22.55■■□□□ 1.2
SLC48A1-207ENST00000549243 SESTD1Q86VW0 696 aa22.55■■□□□ 1.2
SLC48A1-207ENST00000549243 KATNAL1Q9BW62 490 aa22.55■■□□□ 1.2
SLC48A1-207ENST00000549243 FTOQ9C0B1 505 aaKnown RBP eCLIP22.55■■□□□ 1.22e-6■■□□□ 11.5
SLC48A1-207ENST00000549243 NKX2-4Q9H2Z4 354 aa22.55■■□□□ 1.2
SLC48A1-207ENST00000549243 MLXIPQ9HAP2 919 aa22.55■■□□□ 1.2
SLC48A1-207ENST00000549243 GTF2IRD1Q9UHL9 959 aa22.55■■□□□ 1.2
SLC48A1-207ENST00000549243 YBX2Q9Y2T7 364 aaKnown RBP22.55■■□□□ 1.2
SLC48A1-207ENST00000549243 FRMPD4Q14CM0 1322 aa22.55■■□□□ 1.2
SLC48A1-207ENST00000549243 F2P00734 622 aa22.54■■□□□ 1.2
SLC48A1-207ENST00000549243 TGFB3P10600 412 aa22.54■■□□□ 1.2
SLC48A1-207ENST00000549243 GNPTABQ3T906 1256 aa22.54■■□□□ 1.2
SLC48A1-207ENST00000549243 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.54■■□□□ 1.2
SLC48A1-207ENST00000549243 CCDC155Q8N6L0 562 aa22.54■■□□□ 1.2
SLC48A1-207ENST00000549243 FANCBQ8NB91 859 aa22.54■■□□□ 1.2
SLC48A1-207ENST00000549243 NEK1Q96PY6 1258 aa22.54■■□□□ 1.2
SLC48A1-207ENST00000549243 CHD9Q3L8U1 2897 aa22.53■■□□□ 1.2
SLC48A1-207ENST00000549243 PRUNE2Q8WUY3 3088 aa22.53■■□□□ 1.2
SLC48A1-207ENST00000549243 HAS3O00219 553 aa22.53■■□□□ 1.2
SLC48A1-207ENST00000549243 MEIS2O14770 477 aa22.53■■□□□ 1.2
SLC48A1-207ENST00000549243 PPFIA4O75335 1185 aa22.53■■□□□ 1.2
SLC48A1-207ENST00000549243 HOXD8P13378 290 aaPredicted RBP22.53■■□□□ 1.2
SLC48A1-207ENST00000549243 RFC2P35250 354 aa22.53■■□□□ 1.2
SLC48A1-207ENST00000549243 TMTC3Q6ZXV5 915 aa22.53■■□□□ 1.2
SLC48A1-207ENST00000549243 RASEFQ8IZ41 740 aa22.53■■□□□ 1.2
SLC48A1-207ENST00000549243 DHX38Q92620 1227 aaKnown RBP22.53■■□□□ 1.2
SLC48A1-207ENST00000549243 PRDM12Q9H4Q4 367 aa22.53■■□□□ 1.2
SLC48A1-207ENST00000549243 RBAK-RBAKDNI3L0D1 243 aa22.52■■□□□ 1.2
SLC48A1-207ENST00000549243 ACTN1P12814 892 aa22.52■■□□□ 1.2
SLC48A1-207ENST00000549243 MYOGP15173 224 aa22.52■■□□□ 1.2
SLC48A1-207ENST00000549243 ATP2A2P16615 1042 aaKnown RBP22.52■■□□□ 1.2
SLC48A1-207ENST00000549243 ZNF200P98182 395 aaPredicted RBP22.52■■□□□ 1.2
SLC48A1-207ENST00000549243 SEMA3FQ13275 785 aa22.52■■□□□ 1.2
SLC48A1-207ENST00000549243 ADCK5Q3MIX3 580 aa22.52■■□□□ 1.2
SLC48A1-207ENST00000549243 SYNE3Q6ZMZ3 975 aa22.52■■□□□ 1.2
SLC48A1-207ENST00000549243 SGMS1Q86VZ5 419 aa22.52■■□□□ 1.2
SLC48A1-207ENST00000549243 CAGE1Q8TC20 777 aa22.52■■□□□ 1.2
SLC48A1-207ENST00000549243 CCDC136Q96JN2 1154 aa22.52■■□□□ 1.2
SLC48A1-207ENST00000549243 INPP4AQ96PE3 977 aaPredicted RBP22.52■■□□□ 1.2
SLC48A1-207ENST00000549243 SLC28A3Q9HAS3 691 aa22.52■■□□□ 1.2
SLC48A1-207ENST00000549243 PTPRSQ13332 1948 aa22.52■■□□□ 1.2
SLC48A1-207ENST00000549243 PIK3CDO00329 1044 aa22.51■■□□□ 1.19
SLC48A1-207ENST00000549243 STAM2O75886 525 aa22.51■■□□□ 1.19
SLC48A1-207ENST00000549243 UBE2SQ16763 222 aa22.51■■□□□ 1.19
SLC48A1-207ENST00000549243 APOA5Q6Q788 366 aa22.51■■□□□ 1.19
SLC48A1-207ENST00000549243 CYFIP1Q7L576 1253 aa22.51■■□□□ 1.19
SLC48A1-207ENST00000549243 AFAP1L1Q8TED9 768 aa22.51■■□□□ 1.19
SLC48A1-207ENST00000549243 C16orf70Q9BSU1 422 aa22.51■■□□□ 1.19
SLC48A1-207ENST00000549243 PSTPIP2Q9H939 334 aa22.51■■□□□ 1.19
SLC48A1-207ENST00000549243 KAT6AQ92794 2004 aa22.51■■□□□ 1.19
SLC48A1-207ENST00000549243 SPATA31C2B4DYI2 1134 aa22.5■■□□□ 1.19
SLC48A1-207ENST00000549243 NOP56O00567 594 aaKnown RBP22.5■■□□□ 1.19
SLC48A1-207ENST00000549243 FIBPO43427 364 aa22.5■■□□□ 1.19
SLC48A1-207ENST00000549243 SELPP16109 830 aa22.5■■□□□ 1.19
SLC48A1-207ENST00000549243 ICAM3P32942 547 aa22.5■■□□□ 1.19
SLC48A1-207ENST00000549243 EXOSC10Q01780 885 aaKnown RBP22.5■■□□□ 1.19
SLC48A1-207ENST00000549243 HIC1Q14526 733 aa22.5■■□□□ 1.19
SLC48A1-207ENST00000549243 PCNX4Q63HM2 1172 aa22.5■■□□□ 1.19
SLC48A1-207ENST00000549243 LRRC8DQ7L1W4 858 aa22.5■■□□□ 1.19
SLC48A1-207ENST00000549243 DHX32Q7L7V1 743 aaKnown RBP22.5■■□□□ 1.19
SLC48A1-207ENST00000549243 HEATR3Q7Z4Q2 680 aa22.5■■□□□ 1.19
SLC48A1-207ENST00000549243 BRPF3Q9ULD4 1205 aa22.5■■□□□ 1.19
SLC48A1-207ENST00000549243 LGALS2P05162 132 aa22.49■■□□□ 1.19
SLC48A1-207ENST00000549243 CKBP12277 381 aa22.49■■□□□ 1.19
SLC48A1-207ENST00000549243 SP4Q02446 784 aa22.49■■□□□ 1.19
SLC48A1-207ENST00000549243 NEDD9Q14511 834 aa22.49■■□□□ 1.19
SLC48A1-207ENST00000549243 WNT8BQ93098 351 aa22.49■■□□□ 1.19
SLC48A1-207ENST00000549243 GAS2L1Q99501 681 aaPredicted RBP22.49■■□□□ 1.19
SLC48A1-207ENST00000549243 TELO2Q9Y4R8 837 aa22.49■■□□□ 1.19
SLC48A1-207ENST00000549243 PCDHA11Q9Y5I1 949 aa22.49■■□□□ 1.19
SLC48A1-207ENST00000549243 PTK7Q13308 1070 aa22.48■■□□□ 1.19
SLC48A1-207ENST00000549243 METTL7BQ6UX53 244 aa22.48■■□□□ 1.19
SLC48A1-207ENST00000549243 NAP1L2Q9ULW6 460 aaPredicted RBP22.48■■□□□ 1.19
SLC48A1-207ENST00000549243 CNTNAP5Q8WYK1 1306 aa22.48■■□□□ 1.19
SLC48A1-207ENST00000549243 H3BRB1 525 aa22.47■■□□□ 1.19
SLC48A1-207ENST00000549243 ZBTB43O43298 467 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms