RNA–Protein interactions for RNA: ENST00000538689.4

FDFT1-222, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

TSL 2 BASIC

Gene FDFT1, Length 2,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-222	ENST00000538689	CASP1	P29466	404 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	TXK	P42681	527 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	FMR1	Q06787	632 aa	Known RBP eCLIP	7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	TMEM266	Q2M3C6	531 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	FAM83B	Q5T0W9	1011 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	C6orf132	Q5T0Z8	1188 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	MOXD1	Q6UVY6	613 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	CCDC186	Q7Z3E2	898 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	CABP7	Q86V35	215 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	RASSF8	Q8NHQ8	419 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	CRYGN	Q8WXF5	182 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	STAM	Q92783	540 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	HLA-C	Q95604	372 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	ZNF830	Q96NB3	372 aa	Predicted RBP	7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	RAB34	Q9BZG1	259 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	DEFB129	Q9H1M3	183 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	FANCL	Q9NW38	375 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	DDX25	Q9UHL0	483 aa	Known RBP	7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	HACL1	Q9UJ83	578 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689		H7C1D1	291 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	CTNND1	O60716	968 aa	Known RBP	7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	ATP1A3	P13637	1013 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	EPHX2	P34913	555 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	SNAP25	P60880	206 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	CUL4B	Q13620	913 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	KIF4B	Q2VIQ3	1234 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	USH1G	Q495M9	461 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	DPH6	Q7L8W6	267 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	FAM160B2	Q86V87	743 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	HAS1	Q92839	578 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	MMTAG2	Q9BU76	263 aa	Known RBP	7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	KCNF1	Q9H3M0	494 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	LRWD1	Q9UFC0	647 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	NRBP1	Q9UHY1	535 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	FEM1B	Q9UK73	627 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	PCDHGC3	Q9UN70	934 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	ATAD5	Q96QE3	1844 aa		7.91	□□□□□ -1.14
FDFT1-222	ENST00000538689	OPLAH	O14841	1288 aa		7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	RPN1	P04843	607 aa	Known RBP	7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	FDX1	P10109	184 aa		7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	PLCG1	P19174	1290 aa		7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	PTGS1	P23219	599 aa		7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	FANCC	Q00597	558 aa		7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	EAPP	Q56P03	285 aa	Predicted RBP	7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	LRRC15	Q8TF66	581 aa		7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	MBOAT7	Q96N66	472 aa		7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	MED15	Q96RN5	788 aa		7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	P2RX7	Q99572	595 aa	Known RBP	7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	ANO3	Q9BYT9	981 aa		7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	GLIS2	Q9BZE0	524 aa	Predicted RBP	7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	XPO4	Q9C0E2	1151 aa	Known RBP	7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	BLZF1	Q9H2G9	400 aa		7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	RANBP17	Q9H2T7	1088 aa	Known RBP	7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	RMND1	Q9NWS8	449 aa		7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	IFNK	Q9P0W0	207 aa		7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	NFE2L3	Q9Y4A8	694 aa		7.9	□□□□□ -1.14
FDFT1-222	ENST00000538689	SPDYE3	A6NKU9	549 aa		7.9	□□□□□ -1.15
FDFT1-222	ENST00000538689	PPP1R3G	B7ZBB8	358 aa		7.9	□□□□□ -1.15
FDFT1-222	ENST00000538689	ZNF18	P17022	549 aa		7.9	□□□□□ -1.15
FDFT1-222	ENST00000538689	ARHGAP4	P98171	946 aa		7.9	□□□□□ -1.15
FDFT1-222	ENST00000538689	KCNB1	Q14721	858 aa		7.9	□□□□□ -1.15
FDFT1-222	ENST00000538689	ZYX	Q15942	572 aa	Known RBP	7.9	□□□□□ -1.15
FDFT1-222	ENST00000538689	ZNF658	Q5TYW1	1059 aa	Predicted RBP	7.9	□□□□□ -1.15
FDFT1-222	ENST00000538689	LPAR1	Q92633	364 aa		7.9	□□□□□ -1.15
FDFT1-222	ENST00000538689	CALML4	Q96GE6	196 aa		7.9	□□□□□ -1.15
FDFT1-222	ENST00000538689	ZNF341	Q9BYN7	854 aa		7.9	□□□□□ -1.15
FDFT1-222	ENST00000538689	KCNMB3	Q9NPA1	279 aa		7.9	□□□□□ -1.15
FDFT1-222	ENST00000538689	IMPACT	Q9P2X3	320 aa		7.9	□□□□□ -1.15
FDFT1-222	ENST00000538689	PCDHA12	Q9UN75	941 aa		7.9	□□□□□ -1.15
FDFT1-222	ENST00000538689	CFAP99	D6REC4	459 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	HOXA2	O43364	376 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	SREBF1	P36956	1147 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	UBASH3A	P57075	661 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	NR6A1	Q15406	480 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	CCDC144B	Q3MJ40	725 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	KRT79	Q5XKE5	535 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	DCAF15	Q66K64	600 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	MAP1S	Q66K74	1059 aa	Predicted RBP	7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	APOBEC3F	Q8IUX4	373 aa	Known RBP	7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	SLFN12	Q8IYM2	578 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	KIAA1524	Q8TCG1	905 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	KIFC2	Q96AC6	838 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	HOOK2	Q96ED9	719 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	PLIN2	Q99541	437 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	KIAA1683	Q9H0B3	1180 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	STK17A	Q9UEE5	414 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	POTEM	A6NI47	508 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	TBX3	O15119	743 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	WDR46	O15213	610 aa	Known RBP	7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	CBFA2T2	O43439	604 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	KLRC4	O43908	158 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	RHOBTB3	O94955	611 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	SERPINC1	P01008	464 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	CYP3A4	P08684	503 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	CIITA	P33076	1130 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	PRSS12	P56730	875 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	AMPD3	Q01432	767 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689	GRB10	Q13322	594 aa		7.89	□□□□□ -1.15
FDFT1-222	ENST00000538689		Q4G0T1	1027 aa		7.89	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms