RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 TANC1Q9C0D5 1861 aa23.89■■□□□ 1.41
SDCBP-209ENST00000522243 DOCK5Q9H7D0 1870 aa23.89■■□□□ 1.41
SDCBP-209ENST00000522243 FOSL2P15408 326 aa23.88■■□□□ 1.41
SDCBP-209ENST00000522243 BFSP2Q13515 415 aa23.88■■□□□ 1.41
SDCBP-209ENST00000522243 MFSD10Q14728 455 aa23.88■■□□□ 1.41
SDCBP-209ENST00000522243 SESTD1Q86VW0 696 aa23.88■■□□□ 1.41
SDCBP-209ENST00000522243 MICU3Q86XE3 530 aa23.88■■□□□ 1.41
SDCBP-209ENST00000522243 RASEFQ8IZ41 740 aa23.88■■□□□ 1.41
SDCBP-209ENST00000522243 MAFAQ8NHW3 353 aaPredicted RBP23.88■■□□□ 1.41
SDCBP-209ENST00000522243 CTAGE1Q96RT6 745 aa23.88■■□□□ 1.41
SDCBP-209ENST00000522243 MLXIPQ9HAP2 919 aa23.88■■□□□ 1.41
SDCBP-209ENST00000522243 SLC4A7Q9Y6M7 1214 aa23.88■■□□□ 1.41
SDCBP-209ENST00000522243 FRMPD4Q14CM0 1322 aa23.87■■□□□ 1.41
SDCBP-209ENST00000522243 PITPNM1O00562 1244 aa23.87■■□□□ 1.41
SDCBP-209ENST00000522243 MEIS2O14770 477 aa23.87■■□□□ 1.41
SDCBP-209ENST00000522243 RABGGTBP53611 331 aa23.87■■□□□ 1.41
SDCBP-209ENST00000522243 KIAA0753Q2KHM9 967 aa23.87■■□□□ 1.41
SDCBP-209ENST00000522243 C7orf31Q8N865 590 aa23.87■■□□□ 1.41
SDCBP-209ENST00000522243 FANCBQ8NB91 859 aa23.87■■□□□ 1.41
SDCBP-209ENST00000522243 CCDC136Q96JN2 1154 aa23.87■■□□□ 1.41
SDCBP-209ENST00000522243 KATNAL1Q9BW62 490 aa23.87■■□□□ 1.41
SDCBP-209ENST00000522243 GTF2IRD1Q9UHL9 959 aa23.87■■□□□ 1.41
SDCBP-209ENST00000522243 MSRAQ9UJ68 235 aa23.87■■□□□ 1.41
SDCBP-209ENST00000522243 HAS3O00219 553 aa23.86■■□□□ 1.41
SDCBP-209ENST00000522243 F2P00734 622 aa23.86■■□□□ 1.41
SDCBP-209ENST00000522243 PFKMP08237 780 aa23.86■■□□□ 1.41
SDCBP-209ENST00000522243 TGFB3P10600 412 aa23.86■■□□□ 1.41
SDCBP-209ENST00000522243 ADCK5Q3MIX3 580 aa23.86■■□□□ 1.41
SDCBP-209ENST00000522243 NKX2-4Q9H2Z4 354 aa23.86■■□□□ 1.41
SDCBP-209ENST00000522243 YBX2Q9Y2T7 364 aaKnown RBP23.86■■□□□ 1.41
SDCBP-209ENST00000522243 DLL1O00548 723 aa23.85■■□□□ 1.41
SDCBP-209ENST00000522243 PPFIA4O75335 1185 aa23.85■■□□□ 1.41
SDCBP-209ENST00000522243 RAB30Q15771 203 aa23.85■■□□□ 1.41
SDCBP-209ENST00000522243 GNPTABQ3T906 1256 aa23.85■■□□□ 1.41
SDCBP-209ENST00000522243 SYNE3Q6ZMZ3 975 aa23.85■■□□□ 1.41
SDCBP-209ENST00000522243 TMTC3Q6ZXV5 915 aa23.85■■□□□ 1.41
SDCBP-209ENST00000522243 SGMS1Q86VZ5 419 aa23.85■■□□□ 1.41
SDCBP-209ENST00000522243 DHX38Q92620 1227 aaKnown RBP23.85■■□□□ 1.41
SDCBP-209ENST00000522243 FTOQ9C0B1 505 aaKnown RBP eCLIP23.85■■□□□ 1.415e-6■□□□□ 9.5
SDCBP-209ENST00000522243 COL6A3P12111 3177 aa23.85■■□□□ 1.41
SDCBP-209ENST00000522243 RBAK-RBAKDNI3L0D1 243 aa23.84■■□□□ 1.41
SDCBP-209ENST00000522243 PIK3CDO00329 1044 aa23.84■■□□□ 1.41
SDCBP-209ENST00000522243 HOXD8P13378 290 aaPredicted RBP23.84■■□□□ 1.41
SDCBP-209ENST00000522243 RFC2P35250 354 aa23.84■■□□□ 1.41
SDCBP-209ENST00000522243 ZNF200P98182 395 aaPredicted RBP23.84■■□□□ 1.41
SDCBP-209ENST00000522243 EXOSC10Q01780 885 aaKnown RBP23.84■■□□□ 1.41
SDCBP-209ENST00000522243 SEMA3FQ13275 785 aa23.84■■□□□ 1.41
SDCBP-209ENST00000522243 CCDC155Q8N6L0 562 aa23.84■■□□□ 1.41
SDCBP-209ENST00000522243 INPP4AQ96PE3 977 aaPredicted RBP23.84■■□□□ 1.41
SDCBP-209ENST00000522243 BRPF3Q9ULD4 1205 aa23.84■■□□□ 1.41
SDCBP-209ENST00000522243 LAMA2P24043 3122 aaKnown RBP23.83■■□□□ 1.41
SDCBP-209ENST00000522243 SPATA31C2B4DYI2 1134 aa23.83■■□□□ 1.41
SDCBP-209ENST00000522243 ACTN1P12814 892 aa23.83■■□□□ 1.41
SDCBP-209ENST00000522243 MYOGP15173 224 aa23.83■■□□□ 1.41
SDCBP-209ENST00000522243 ICAM3P32942 547 aa23.83■■□□□ 1.41
SDCBP-209ENST00000522243 UBE2SQ16763 222 aa23.83■■□□□ 1.41
SDCBP-209ENST00000522243 APOA5Q6Q788 366 aa23.83■■□□□ 1.41
SDCBP-209ENST00000522243 DHX32Q7L7V1 743 aaKnown RBP23.83■■□□□ 1.41
SDCBP-209ENST00000522243 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.83■■□□□ 1.41
SDCBP-209ENST00000522243 CAGE1Q8TC20 777 aa23.83■■□□□ 1.41
SDCBP-209ENST00000522243 C16orf70Q9BSU1 422 aa23.83■■□□□ 1.41
SDCBP-209ENST00000522243 PSTPIP2Q9H939 334 aa23.83■■□□□ 1.41
SDCBP-209ENST00000522243 TET1Q8NFU7 2136 aa23.83■■□□□ 1.4
SDCBP-209ENST00000522243 FIBPO43427 364 aa23.82■■□□□ 1.4
SDCBP-209ENST00000522243 STAM2O75886 525 aa23.82■■□□□ 1.4
SDCBP-209ENST00000522243 ATP2A2P16615 1042 aaKnown RBP23.82■■□□□ 1.4
SDCBP-209ENST00000522243 HIC1Q14526 733 aa23.82■■□□□ 1.4
SDCBP-209ENST00000522243 PCNX4Q63HM2 1172 aa23.82■■□□□ 1.4
SDCBP-209ENST00000522243 CYFIP1Q7L576 1253 aa23.82■■□□□ 1.4
SDCBP-209ENST00000522243 HEATR3Q7Z4Q2 680 aa23.82■■□□□ 1.4
SDCBP-209ENST00000522243 AFAP1L1Q8TED9 768 aa23.82■■□□□ 1.4
SDCBP-209ENST00000522243 PRDM12Q9H4Q4 367 aa23.82■■□□□ 1.4
SDCBP-209ENST00000522243 TELO2Q9Y4R8 837 aa23.82■■□□□ 1.4
SDCBP-209ENST00000522243 NOP56O00567 594 aaKnown RBP23.81■■□□□ 1.4
SDCBP-209ENST00000522243 LGALS2P05162 132 aa23.81■■□□□ 1.4
SDCBP-209ENST00000522243 SELPP16109 830 aa23.81■■□□□ 1.4
SDCBP-209ENST00000522243 NEDD9Q14511 834 aa23.81■■□□□ 1.4
SDCBP-209ENST00000522243 TSGA10IPQ3SY00 556 aa23.81■■□□□ 1.4
SDCBP-209ENST00000522243 LRRC8DQ7L1W4 858 aa23.81■■□□□ 1.4
SDCBP-209ENST00000522243 WNT8BQ93098 351 aa23.81■■□□□ 1.4
SDCBP-209ENST00000522243 SLC28A3Q9HAS3 691 aa23.81■■□□□ 1.4
SDCBP-209ENST00000522243 CNTNAP5Q8WYK1 1306 aa23.81■■□□□ 1.4
SDCBP-209ENST00000522243 CKBP12277 381 aa23.8■■□□□ 1.4
SDCBP-209ENST00000522243 CPA1P15085 419 aa23.8■■□□□ 1.4
SDCBP-209ENST00000522243 SP4Q02446 784 aa23.8■■□□□ 1.4
SDCBP-209ENST00000522243 GPNMBQ14956 572 aa23.8■■□□□ 1.4
SDCBP-209ENST00000522243 RTN1Q16799 776 aa23.8■■□□□ 1.4
SDCBP-209ENST00000522243 KLF18A0A0U1RQI7 1052 aa23.79■■□□□ 1.4
SDCBP-209ENST00000522243 H3BRB1 525 aa23.79■■□□□ 1.4
SDCBP-209ENST00000522243 ZBTB43O43298 467 aa23.79■■□□□ 1.4
SDCBP-209ENST00000522243 PTK7Q13308 1070 aa23.79■■□□□ 1.4
SDCBP-209ENST00000522243 KRT32Q14532 448 aa23.79■■□□□ 1.4
SDCBP-209ENST00000522243 METTL7BQ6UX53 244 aa23.79■■□□□ 1.4
SDCBP-209ENST00000522243 NLRX1Q86UT6 975 aa23.79■■□□□ 1.4
SDCBP-209ENST00000522243 GAS2L1Q99501 681 aaPredicted RBP23.79■■□□□ 1.4
SDCBP-209ENST00000522243 TUT1Q9H6E5 874 aaKnown RBP23.79■■□□□ 1.4
SDCBP-209ENST00000522243 RBM28Q9NW13 759 aaKnown RBP23.79■■□□□ 1.4
SDCBP-209ENST00000522243 NAP1L2Q9ULW6 460 aaPredicted RBP23.79■■□□□ 1.4
SDCBP-209ENST00000522243 PCDHA11Q9Y5I1 949 aa23.79■■□□□ 1.4
SDCBP-209ENST00000522243 TRIM71Q2Q1W2 868 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms