RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 KIAA0753Q2KHM9 967 aa14.97□□□□□ -0.01
FN1-226ENST00000496542 CELF3Q5SZQ8 465 aaKnown RBP14.97□□□□□ -0.01
FN1-226ENST00000496542 PPP2R2DQ66LE6 453 aa14.97□□□□□ -0.01
FN1-226ENST00000496542 KCNV1Q6PIU1 500 aa14.97□□□□□ -0.01
FN1-226ENST00000496542 CAGE1Q8TC20 777 aa14.97□□□□□ -0.01
FN1-226ENST00000496542 PPM1EQ8WY54 764 aa14.97□□□□□ -0.01
FN1-226ENST00000496542 GPKOWQ92917 476 aaPredicted RBP eCLIP14.97□□□□□ -0.01
FN1-226ENST00000496542 RRP36Q96EU6 259 aaKnown RBP14.97□□□□□ -0.01
FN1-226ENST00000496542 SPATA33Q96N06 139 aa14.97□□□□□ -0.01
FN1-226ENST00000496542 CTAGE1Q96RT6 745 aa14.97□□□□□ -0.01
FN1-226ENST00000496542 SPZ1Q9BXG8 430 aa14.97□□□□□ -0.01
FN1-226ENST00000496542 ANO2Q9NQ90 1003 aa14.97□□□□□ -0.01
FN1-226ENST00000496542 HDAC6Q9UBN7 1215 aa14.97□□□□□ -0.01
FN1-226ENST00000496542 GTF2IRD1Q9UHL9 959 aa14.97□□□□□ -0.01
FN1-226ENST00000496542 PCDHA11Q9Y5I1 949 aa14.97□□□□□ -0.01
FN1-226ENST00000496542 DOCK5Q9H7D0 1870 aa14.97□□□□□ -0.01
FN1-226ENST00000496542 CCDC69A6NI79 296 aa14.96□□□□□ -0.01
FN1-226ENST00000496542 SH2B2O14492 632 aaPredicted RBP14.96□□□□□ -0.01
FN1-226ENST00000496542 SP2Q02086 613 aa14.96□□□□□ -0.01
FN1-226ENST00000496542 COL9A3Q14050 684 aaPredicted RBP14.96□□□□□ -0.01
FN1-226ENST00000496542 MYSM1Q5VVJ2 828 aa14.96□□□□□ -0.01
FN1-226ENST00000496542 SKAP1Q86WV1 359 aa14.96□□□□□ -0.01
FN1-226ENST00000496542 RAB11FIP4Q86YS3 637 aa14.96□□□□□ -0.01
FN1-226ENST00000496542 AFAP1L1Q8TED9 768 aa14.96□□□□□ -0.01
FN1-226ENST00000496542 DHX38Q92620 1227 aaKnown RBP14.96□□□□□ -0.01
FN1-226ENST00000496542 MAP3K14Q99558 947 aa14.96□□□□□ -0.01
FN1-226ENST00000496542 SEC63Q9UGP8 760 aaKnown RBP14.96□□□□□ -0.01
FN1-226ENST00000496542 HAS3O00219 553 aa14.95□□□□□ -0.02
FN1-226ENST00000496542 PLEKHA8P1O95397 391 aa14.95□□□□□ -0.02
FN1-226ENST00000496542 HOXD8P13378 290 aaPredicted RBP14.95□□□□□ -0.02
FN1-226ENST00000496542 SELPP16109 830 aa14.95□□□□□ -0.02
FN1-226ENST00000496542 RXRAP19793 462 aa14.95□□□□□ -0.02
FN1-226ENST00000496542 IGFBP4P22692 258 aa14.95□□□□□ -0.02
FN1-226ENST00000496542 HSDL1Q3SXM5 330 aa14.95□□□□□ -0.02
FN1-226ENST00000496542 CREB3L3Q68CJ9 461 aa14.95□□□□□ -0.02
FN1-226ENST00000496542 LRRC8DQ7L1W4 858 aa14.95□□□□□ -0.02
FN1-226ENST00000496542 SMARCC2Q8TAQ2 1214 aa14.95□□□□□ -0.02
FN1-226ENST00000496542 CUL5Q93034 780 aa14.95□□□□□ -0.02
FN1-226ENST00000496542 TMEM87BQ96K49 555 aa14.95□□□□□ -0.02
FN1-226ENST00000496542 SLC9A7Q96T83 725 aa14.95□□□□□ -0.02
FN1-226ENST00000496542 LZTS2Q9BRK4 669 aa14.95□□□□□ -0.02
FN1-226ENST00000496542 MTA3Q9BTC8 594 aa14.95□□□□□ -0.02
FN1-226ENST00000496542 LRRC2Q9BYS8 371 aa14.95□□□□□ -0.02
FN1-226ENST00000496542 MLXIPQ9HAP2 919 aa14.95□□□□□ -0.02
FN1-226ENST00000496542 PRRC2BQ5JSZ5 2229 aaKnown RBP14.94□□□□□ -0.02
FN1-226ENST00000496542 FRMPD4Q14CM0 1322 aa14.94□□□□□ -0.02
FN1-226ENST00000496542 PPFIA4O75335 1185 aa14.94□□□□□ -0.02
FN1-226ENST00000496542 TGFB3P10600 412 aa14.94□□□□□ -0.02
FN1-226ENST00000496542 GNAQP50148 359 aa14.94□□□□□ -0.02
FN1-226ENST00000496542 MRPS9P82933 396 aaKnown RBP14.94□□□□□ -0.02
FN1-226ENST00000496542 ZNF200P98182 395 aaPredicted RBP14.94□□□□□ -0.02
FN1-226ENST00000496542 ADGRE1Q14246 886 aa14.94□□□□□ -0.02
FN1-226ENST00000496542 GNPTABQ3T906 1256 aa14.94□□□□□ -0.02
FN1-226ENST00000496542 USP17L6PQ6QN14 398 aa14.94□□□□□ -0.02
FN1-226ENST00000496542 CMTR1Q8N1G2 835 aaKnown RBP14.94□□□□□ -0.02
FN1-226ENST00000496542 TMTC2Q8N394 836 aa14.94□□□□□ -0.02
FN1-226ENST00000496542 SRBD1Q8N5C6 995 aaKnown RBP14.94□□□□□ -0.02
FN1-226ENST00000496542 TRANK1O15050 2925 aa14.94□□□□□ -0.02
FN1-226ENST00000496542 PTPRSQ13332 1948 aa14.94□□□□□ -0.02
FN1-226ENST00000496542 NOP56O00567 594 aaKnown RBP14.93□□□□□ -0.02
FN1-226ENST00000496542 CA3P07451 260 aa14.93□□□□□ -0.02
FN1-226ENST00000496542 CKBP12277 381 aa14.93□□□□□ -0.02
FN1-226ENST00000496542 KCNJ6P48051 423 aa14.93□□□□□ -0.02
FN1-226ENST00000496542 RBL2Q08999 1139 aa14.93□□□□□ -0.02
FN1-226ENST00000496542 PTK7Q13308 1070 aa14.93□□□□□ -0.02
FN1-226ENST00000496542 CCDC85BQ15834 202 aaPredicted RBP14.93□□□□□ -0.02
FN1-226ENST00000496542 BMP2KLQ5H9B9 411 aa14.93□□□□□ -0.02
FN1-226ENST00000496542 INPP4AQ96PE3 977 aaPredicted RBP14.93□□□□□ -0.02
FN1-226ENST00000496542 BCAS3Q9H6U6 928 aa14.93□□□□□ -0.02
FN1-226ENST00000496542 PRDM6Q9NQX0 595 aa14.93□□□□□ -0.02
FN1-226ENST00000496542 RTEL1Q9NZ71 1219 aa14.93□□□□□ -0.02
FN1-226ENST00000496542 SLC12A7Q9Y666 1083 aa14.93□□□□□ -0.02
FN1-226ENST00000496542 hCG_1642624A0A1W2PR95 340 aa14.92□□□□□ -0.02
FN1-226ENST00000496542 STAM2O75886 525 aa14.92□□□□□ -0.02
FN1-226ENST00000496542 BAIAP3O94812 1187 aa14.92□□□□□ -0.02
FN1-226ENST00000496542 LGALS2P05162 132 aa14.92□□□□□ -0.02
FN1-226ENST00000496542 CALM1P0DP23 149 aa14.92□□□□□ -0.02
FN1-226ENST00000496542 CALM2P0DP24 149 aa14.92□□□□□ -0.02
FN1-226ENST00000496542 CALM3P0DP25 149 aa14.92□□□□□ -0.02
FN1-226ENST00000496542 SMARCA1P28370 1054 aa14.92□□□□□ -0.02
FN1-226ENST00000496542 LIFRP42702 1097 aa14.92□□□□□ -0.02
FN1-226ENST00000496542 SEMA3FQ13275 785 aa14.92□□□□□ -0.02
FN1-226ENST00000496542 NECTIN1Q15223 517 aa14.92□□□□□ -0.02
FN1-226ENST00000496542 CENPQQ7L2Z9 268 aaPredicted RBP14.92□□□□□ -0.02
FN1-226ENST00000496542 CYFIP1Q7L576 1253 aa14.92□□□□□ -0.02
FN1-226ENST00000496542 MICU3Q86XE3 530 aa14.92□□□□□ -0.02
FN1-226ENST00000496542 HERC6Q8IVU3 1022 aa14.92□□□□□ -0.02
FN1-226ENST00000496542 WNT8BQ93098 351 aa14.92□□□□□ -0.02
FN1-226ENST00000496542 C16orf70Q9BSU1 422 aa14.92□□□□□ -0.02
FN1-226ENST00000496542 SPTBN5Q9NRC6 3674 aaKnown RBP14.91□□□□□ -0.02
FN1-226ENST00000496542 SPATA31C2B4DYI2 1134 aa14.91□□□□□ -0.02
FN1-226ENST00000496542 RBAK-RBAKDNI3L0D1 243 aa14.91□□□□□ -0.02
FN1-226ENST00000496542 MEIS2O14770 477 aa14.91□□□□□ -0.02
FN1-226ENST00000496542 FIBPO43427 364 aa14.91□□□□□ -0.02
FN1-226ENST00000496542 NBNO60934 754 aa14.91□□□□□ -0.02
FN1-226ENST00000496542 ICAM3P32942 547 aa14.91□□□□□ -0.02
FN1-226ENST00000496542 WDR5P61964 334 aaKnown RBP14.91□□□□□ -0.02
FN1-226ENST00000496542 SP4Q02446 784 aa14.91□□□□□ -0.02
FN1-226ENST00000496542 NEDD9Q14511 834 aa14.91□□□□□ -0.02
FN1-226ENST00000496542 HIC1Q14526 733 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms