RNA–Protein interactions for RNA: ENST00000495212.1

HDGF-209, Transcript of heparin binding growth factor, humanhuman

TSL 3

Gene HDGF, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-209ENST00000495212 PPTC7Q8NI37 304 aa23.06■■□□□ 1.28
HDGF-209ENST00000495212 SPATA33Q96N06 139 aa23.06■■□□□ 1.28
HDGF-209ENST00000495212 TELO2Q9Y4R8 837 aa23.06■■□□□ 1.28
HDGF-209ENST00000495212 TRAF1Q13077 416 aa23.05■■□□□ 1.28
HDGF-209ENST00000495212 SEMA3FQ13275 785 aa23.05■■□□□ 1.28
HDGF-209ENST00000495212 MFSD10Q14728 455 aa23.05■■□□□ 1.28
HDGF-209ENST00000495212 KIAA0753Q2KHM9 967 aa23.05■■□□□ 1.28
HDGF-209ENST00000495212 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.05■■□□□ 1.28
HDGF-209ENST00000495212 MTA3Q9BTC8 594 aa23.05■■□□□ 1.28
HDGF-209ENST00000495212 MTIF3Q9H2K0 278 aaKnown RBP23.05■■□□□ 1.28
HDGF-209ENST00000495212 PRDM12Q9H4Q4 367 aa23.05■■□□□ 1.28
HDGF-209ENST00000495212 GTF2IRD1Q9UHL9 959 aa23.05■■□□□ 1.28
HDGF-209ENST00000495212 SLC4A7Q9Y6M7 1214 aa23.05■■□□□ 1.28
HDGF-209ENST00000495212 UNC80Q8N2C7 3258 aa23.04■■□□□ 1.28
HDGF-209ENST00000495212 HAS3O00219 553 aa23.04■■□□□ 1.28
HDGF-209ENST00000495212 MEIS2O14770 477 aa23.04■■□□□ 1.28
HDGF-209ENST00000495212 LIFRP42702 1097 aa23.04■■□□□ 1.28
HDGF-209ENST00000495212 SESTD1Q86VW0 696 aa23.04■■□□□ 1.28
HDGF-209ENST00000495212 RASEFQ8IZ41 740 aa23.04■■□□□ 1.28
HDGF-209ENST00000495212 SMARCC2Q8TAQ2 1214 aa23.04■■□□□ 1.28
HDGF-209ENST00000495212 WNT8BQ93098 351 aa23.04■■□□□ 1.28
HDGF-209ENST00000495212 MSRAQ9UJ68 235 aa23.04■■□□□ 1.28
HDGF-209ENST00000495212 FRMPD4Q14CM0 1322 aa23.04■■□□□ 1.28
HDGF-209ENST00000495212 PITPNM1O00562 1244 aa23.03■■□□□ 1.28
HDGF-209ENST00000495212 F2P00734 622 aa23.03■■□□□ 1.28
HDGF-209ENST00000495212 GPNMBQ14956 572 aa23.03■■□□□ 1.28
HDGF-209ENST00000495212 ADCK5Q3MIX3 580 aa23.03■■□□□ 1.28
HDGF-209ENST00000495212 MICU3Q86XE3 530 aa23.03■■□□□ 1.28
HDGF-209ENST00000495212 TMTC2Q8N394 836 aa23.03■■□□□ 1.28
HDGF-209ENST00000495212 C7orf31Q8N865 590 aa23.03■■□□□ 1.28
HDGF-209ENST00000495212 USP38Q8NB14 1042 aa23.03■■□□□ 1.28
HDGF-209ENST00000495212 FTOQ9C0B1 505 aaKnown RBP eCLIP23.03■■□□□ 1.283e-10■■■□□ 16.9
HDGF-209ENST00000495212 MLXIPQ9HAP2 919 aa23.03■■□□□ 1.28
HDGF-209ENST00000495212 SEC63Q9UGP8 760 aaKnown RBP23.03■■□□□ 1.28
HDGF-209ENST00000495212 SLC12A7Q9Y666 1083 aa23.03■■□□□ 1.28
HDGF-209ENST00000495212 PRUNE2Q8WUY3 3088 aa23.02■■□□□ 1.28
HDGF-209ENST00000495212 A0A0C4DFX4 3053 aa23.02■■□□□ 1.28
HDGF-209ENST00000495212 BFSP2Q13515 415 aa23.02■■□□□ 1.28
HDGF-209ENST00000495212 RAB30Q15771 203 aa23.02■■□□□ 1.28
HDGF-209ENST00000495212 KCNV1Q6PIU1 500 aa23.02■■□□□ 1.28
HDGF-209ENST00000495212 HOXD8P13378 290 aaPredicted RBP23.01■■□□□ 1.27
HDGF-209ENST00000495212 ATP2A2P16615 1042 aaKnown RBP23.01■■□□□ 1.27
HDGF-209ENST00000495212 SMARCA1P28370 1054 aa23.01■■□□□ 1.27
HDGF-209ENST00000495212 GNAQP50148 359 aa23.01■■□□□ 1.27
HDGF-209ENST00000495212 UBE2SQ16763 222 aa23.01■■□□□ 1.27
HDGF-209ENST00000495212 TCTN1Q2MV58 587 aa23.01■■□□□ 1.27
HDGF-209ENST00000495212 TMTC3Q6ZXV5 915 aa23.01■■□□□ 1.27
HDGF-209ENST00000495212 FANCBQ8NB91 859 aa23.01■■□□□ 1.27
HDGF-209ENST00000495212 NEK1Q96PY6 1258 aa23.01■■□□□ 1.27
HDGF-209ENST00000495212 LZTS2Q9BRK4 669 aa23.01■■□□□ 1.27
HDGF-209ENST00000495212 C16orf70Q9BSU1 422 aa23.01■■□□□ 1.27
HDGF-209ENST00000495212 BRPF3Q9ULD4 1205 aa23.01■■□□□ 1.27
HDGF-209ENST00000495212 PTPRSQ13332 1948 aa23.01■■□□□ 1.27
HDGF-209ENST00000495212 PPFIA4O75335 1185 aa23■■□□□ 1.27
HDGF-209ENST00000495212 CDC45O75419 566 aa23■■□□□ 1.27
HDGF-209ENST00000495212 PFKMP08237 780 aa23■■□□□ 1.27
HDGF-209ENST00000495212 EXOSC10Q01780 885 aaKnown RBP23■■□□□ 1.27
HDGF-209ENST00000495212 ADGRE1Q14246 886 aa23■■□□□ 1.27
HDGF-209ENST00000495212 CYFIP1Q7L576 1253 aa23■■□□□ 1.27
HDGF-209ENST00000495212 PPM1EQ8WY54 764 aa23■■□□□ 1.27
HDGF-209ENST00000495212 CUL5Q93034 780 aa23■■□□□ 1.27
HDGF-209ENST00000495212 INPP4AQ96PE3 977 aaPredicted RBP23■■□□□ 1.27
HDGF-209ENST00000495212 KATNAL1Q9BW62 490 aa23■■□□□ 1.27
HDGF-209ENST00000495212 SPATA31C2B4DYI2 1134 aa22.99■■□□□ 1.27
HDGF-209ENST00000495212 CALM1P0DP23 149 aa22.99■■□□□ 1.27
HDGF-209ENST00000495212 CALM2P0DP24 149 aa22.99■■□□□ 1.27
HDGF-209ENST00000495212 CALM3P0DP25 149 aa22.99■■□□□ 1.27
HDGF-209ENST00000495212 TGFB3P10600 412 aa22.99■■□□□ 1.27
HDGF-209ENST00000495212 CKBP12277 381 aa22.99■■□□□ 1.27
HDGF-209ENST00000495212 CPA1P15085 419 aa22.99■■□□□ 1.27
HDGF-209ENST00000495212 ICAM3P32942 547 aa22.99■■□□□ 1.27
HDGF-209ENST00000495212 RFC2P35250 354 aa22.99■■□□□ 1.27
HDGF-209ENST00000495212 SP4Q02446 784 aa22.99■■□□□ 1.27
HDGF-209ENST00000495212 LRRC8DQ7L1W4 858 aa22.99■■□□□ 1.27
HDGF-209ENST00000495212 SGMS1Q86VZ5 419 aa22.99■■□□□ 1.27
HDGF-209ENST00000495212 CAGE1Q8TC20 777 aa22.99■■□□□ 1.27
HDGF-209ENST00000495212 SLC28A3Q9HAS3 691 aa22.99■■□□□ 1.27
HDGF-209ENST00000495212 PRDM6Q9NQX0 595 aa22.99■■□□□ 1.27
HDGF-209ENST00000495212 CHD9Q3L8U1 2897 aa22.98■■□□□ 1.27
HDGF-209ENST00000495212 PIK3CDO00329 1044 aa22.98■■□□□ 1.27
HDGF-209ENST00000495212 LGALS2P05162 132 aa22.98■■□□□ 1.27
HDGF-209ENST00000495212 SELPP16109 830 aa22.98■■□□□ 1.27
HDGF-209ENST00000495212 TRIM71Q2Q1W2 868 aaKnown RBP22.98■■□□□ 1.27
HDGF-209ENST00000495212 RNF20Q5VTR2 975 aa22.98■■□□□ 1.27
HDGF-209ENST00000495212 APOA5Q6Q788 366 aa22.98■■□□□ 1.27
HDGF-209ENST00000495212 TMCO2Q7Z6W1 182 aaPredicted RBP22.98■■□□□ 1.27
HDGF-209ENST00000495212 CCDC155Q8N6L0 562 aa22.98■■□□□ 1.27
HDGF-209ENST00000495212 AFAP1L1Q8TED9 768 aa22.98■■□□□ 1.27
HDGF-209ENST00000495212 PSTPIP2Q9H939 334 aa22.98■■□□□ 1.27
HDGF-209ENST00000495212 NBNO60934 754 aa22.97■■□□□ 1.27
HDGF-209ENST00000495212 ARHGEF15O94989 841 aa22.97■■□□□ 1.27
HDGF-209ENST00000495212 ACTN1P12814 892 aa22.97■■□□□ 1.27
HDGF-209ENST00000495212 GNPTABQ3T906 1256 aa22.97■■□□□ 1.27
HDGF-209ENST00000495212 ZNF618Q5T7W0 954 aa22.97■■□□□ 1.27
HDGF-209ENST00000495212 PCNX4Q63HM2 1172 aa22.97■■□□□ 1.27
HDGF-209ENST00000495212 TRAF7Q6Q0C0 670 aa22.97■■□□□ 1.27
HDGF-209ENST00000495212 HEATR3Q7Z4Q2 680 aa22.97■■□□□ 1.27
HDGF-209ENST00000495212 TRIM50Q86XT4 487 aa22.97■■□□□ 1.27
HDGF-209ENST00000495212 COL25A1Q9BXS0 654 aaPredicted RBP22.97■■□□□ 1.27
HDGF-209ENST00000495212 CERS4Q9HA82 394 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms