RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 MYOGP15173 224 aa25.62■■□□□ 1.69
LYSMD4-208ENST00000493256 UBA1P22314 1058 aaKnown RBP25.62■■□□□ 1.69
LYSMD4-208ENST00000493256 MFSD10Q14728 455 aa25.62■■□□□ 1.69
LYSMD4-208ENST00000493256 HSDL1Q3SXM5 330 aa25.62■■□□□ 1.69
LYSMD4-208ENST00000493256 CCDC155Q8N6L0 562 aa25.62■■□□□ 1.69
LYSMD4-208ENST00000493256 C7orf31Q8N865 590 aa25.62■■□□□ 1.69
LYSMD4-208ENST00000493256 SPATA33Q96N06 139 aa25.62■■□□□ 1.69
LYSMD4-208ENST00000493256 KATNAL1Q9BW62 490 aa25.62■■□□□ 1.69
LYSMD4-208ENST00000493256 FTOQ9C0B1 505 aaKnown RBP eCLIP25.62■■□□□ 1.69
LYSMD4-208ENST00000493256 FRMPD4Q14CM0 1322 aa25.62■■□□□ 1.69
LYSMD4-208ENST00000493256 SH2B2O14492 632 aaPredicted RBP25.61■■□□□ 1.69
LYSMD4-208ENST00000493256 TGFB3P10600 412 aa25.61■■□□□ 1.69
LYSMD4-208ENST00000493256 KIF5BP33176 963 aa25.61■■□□□ 1.69
LYSMD4-208ENST00000493256 MCM5P33992 734 aa25.61■■□□□ 1.69
LYSMD4-208ENST00000493256 ADGRE1Q14246 886 aa25.61■■□□□ 1.69
LYSMD4-208ENST00000493256 KIAA0753Q2KHM9 967 aa25.61■■□□□ 1.69
LYSMD4-208ENST00000493256 AFAP1L1Q8TED9 768 aa25.61■■□□□ 1.69
LYSMD4-208ENST00000493256 CREB3L3Q68CJ9 461 aa25.6■■□□□ 1.69
LYSMD4-208ENST00000493256 NFXL1Q6ZNB6 911 aa25.6■■□□□ 1.69
LYSMD4-208ENST00000493256 SKAP1Q86WV1 359 aa25.6■■□□□ 1.69
LYSMD4-208ENST00000493256 RRP36Q96EU6 259 aaKnown RBP25.6■■□□□ 1.69
LYSMD4-208ENST00000493256 TMEM87BQ96K49 555 aa25.6■■□□□ 1.69
LYSMD4-208ENST00000493256 PPFIA4O75335 1185 aa25.59■■□□□ 1.69
LYSMD4-208ENST00000493256 PLEKHA8P1O95397 391 aa25.59■■□□□ 1.69
LYSMD4-208ENST00000493256 SMARCA1P28370 1054 aa25.59■■□□□ 1.69
LYSMD4-208ENST00000493256 MRPS9P82933 396 aaKnown RBP25.59■■□□□ 1.69
LYSMD4-208ENST00000493256 RBL2Q08999 1139 aa25.59■■□□□ 1.69
LYSMD4-208ENST00000493256 GPNMBQ14956 572 aa25.59■■□□□ 1.69
LYSMD4-208ENST00000493256 NECTIN1Q15223 517 aa25.59■■□□□ 1.69
LYSMD4-208ENST00000493256 PPP2R2DQ66LE6 453 aa25.59■■□□□ 1.69
LYSMD4-208ENST00000493256 ANO2Q9NQ90 1003 aa25.59■■□□□ 1.69
LYSMD4-208ENST00000493256 TTC28Q96AY4 2481 aa25.59■■□□□ 1.69
LYSMD4-208ENST00000493256 CCDC69A6NI79 296 aa25.58■■□□□ 1.69
LYSMD4-208ENST00000493256 SELPP16109 830 aa25.58■■□□□ 1.69
LYSMD4-208ENST00000493256 LRRC8DQ7L1W4 858 aa25.58■■□□□ 1.69
LYSMD4-208ENST00000493256 TMTC2Q8N394 836 aa25.58■■□□□ 1.69
LYSMD4-208ENST00000493256 SRBD1Q8N5C6 995 aaKnown RBP25.58■■□□□ 1.69
LYSMD4-208ENST00000493256 INPP4AQ96PE3 977 aaPredicted RBP25.58■■□□□ 1.69
LYSMD4-208ENST00000493256 SLC9A7Q96T83 725 aa25.58■■□□□ 1.69
LYSMD4-208ENST00000493256 LZTS2Q9BRK4 669 aa25.58■■□□□ 1.69
LYSMD4-208ENST00000493256 BCAS3Q9H6U6 928 aa25.58■■□□□ 1.69
LYSMD4-208ENST00000493256 MLXIPQ9HAP2 919 aa25.58■■□□□ 1.69
LYSMD4-208ENST00000493256 CKBP12277 381 aa25.57■■□□□ 1.68
LYSMD4-208ENST00000493256 RXRAP19793 462 aa25.57■■□□□ 1.68
LYSMD4-208ENST00000493256 LIFRP42702 1097 aa25.57■■□□□ 1.68
LYSMD4-208ENST00000493256 GNAQP50148 359 aa25.57■■□□□ 1.68
LYSMD4-208ENST00000493256 ZNF200P98182 395 aaPredicted RBP25.57■■□□□ 1.68
LYSMD4-208ENST00000493256 USP17L6PQ6QN14 398 aa25.57■■□□□ 1.68
LYSMD4-208ENST00000493256 C16orf70Q9BSU1 422 aa25.57■■□□□ 1.68
LYSMD4-208ENST00000493256 SEC63Q9UGP8 760 aaKnown RBP25.57■■□□□ 1.68
LYSMD4-208ENST00000493256 STAM2O75886 525 aa25.56■■□□□ 1.68
LYSMD4-208ENST00000493256 ICAM3P32942 547 aa25.56■■□□□ 1.68
LYSMD4-208ENST00000493256 SEMA3FQ13275 785 aa25.56■■□□□ 1.68
LYSMD4-208ENST00000493256 PTK7Q13308 1070 aa25.56■■□□□ 1.68
LYSMD4-208ENST00000493256 HIC1Q14526 733 aa25.56■■□□□ 1.68
LYSMD4-208ENST00000493256 TRIM71Q2Q1W2 868 aaKnown RBP25.56■■□□□ 1.68
LYSMD4-208ENST00000493256 GNPTABQ3T906 1256 aa25.56■■□□□ 1.68
LYSMD4-208ENST00000493256 BMP2KLQ5H9B9 411 aa25.56■■□□□ 1.68
LYSMD4-208ENST00000493256 CMTR1Q8N1G2 835 aaKnown RBP25.56■■□□□ 1.68
LYSMD4-208ENST00000493256 SMARCC2Q8TAQ2 1214 aa25.56■■□□□ 1.68
LYSMD4-208ENST00000493256 PHOSPHO2Q8TCD6 241 aa25.56■■□□□ 1.68
LYSMD4-208ENST00000493256 PPM1EQ8WY54 764 aa25.56■■□□□ 1.68
LYSMD4-208ENST00000493256 WNT8BQ93098 351 aa25.56■■□□□ 1.68
LYSMD4-208ENST00000493256 LRRC2Q9BYS8 371 aa25.56■■□□□ 1.68
LYSMD4-208ENST00000493256 SPTBN5Q9NRC6 3674 aaKnown RBP25.56■■□□□ 1.68
LYSMD4-208ENST00000493256 SPATA31C2B4DYI2 1134 aa25.55■■□□□ 1.68
LYSMD4-208ENST00000493256 MEIS2O14770 477 aa25.55■■□□□ 1.68
LYSMD4-208ENST00000493256 BAIAP3O94812 1187 aa25.55■■□□□ 1.68
LYSMD4-208ENST00000493256 CA3P07451 260 aa25.55■■□□□ 1.68
LYSMD4-208ENST00000493256 IGFBP4P22692 258 aa25.55■■□□□ 1.68
LYSMD4-208ENST00000493256 RAB11FIP4Q86YS3 637 aa25.55■■□□□ 1.68
LYSMD4-208ENST00000493256 CUL5Q93034 780 aa25.55■■□□□ 1.68
LYSMD4-208ENST00000493256 PRDM6Q9NQX0 595 aa25.55■■□□□ 1.68
LYSMD4-208ENST00000493256 RTEL1Q9NZ71 1219 aa25.55■■□□□ 1.68
LYSMD4-208ENST00000493256 TRANK1O15050 2925 aa25.55■■□□□ 1.68
LYSMD4-208ENST00000493256 DOCK5Q9H7D0 1870 aa25.54■■□□□ 1.68
LYSMD4-208ENST00000493256 PIK3CDO00329 1044 aa25.54■■□□□ 1.68
LYSMD4-208ENST00000493256 NBNO60934 754 aa25.54■■□□□ 1.68
LYSMD4-208ENST00000493256 CALM1P0DP23 149 aa25.54■■□□□ 1.68
LYSMD4-208ENST00000493256 CALM2P0DP24 149 aa25.54■■□□□ 1.68
LYSMD4-208ENST00000493256 CALM3P0DP25 149 aa25.54■■□□□ 1.68
LYSMD4-208ENST00000493256 CENPQQ7L2Z9 268 aaPredicted RBP25.54■■□□□ 1.68
LYSMD4-208ENST00000493256 HERC6Q8IVU3 1022 aa25.54■■□□□ 1.68
LYSMD4-208ENST00000493256 PTPRSQ13332 1948 aa25.54■■□□□ 1.68
LYSMD4-208ENST00000493256 RBAK-RBAKDNI3L0D1 243 aa25.53■■□□□ 1.68
LYSMD4-208ENST00000493256 FIBPO43427 364 aa25.53■■□□□ 1.68
LYSMD4-208ENST00000493256 PARNO95453 639 aaKnown RBP25.53■■□□□ 1.68
LYSMD4-208ENST00000493256 CXCL10P02778 98 aa25.53■■□□□ 1.68
LYSMD4-208ENST00000493256 TRAF7Q6Q0C0 670 aa25.53■■□□□ 1.68
LYSMD4-208ENST00000493256 SLC12A7Q9Y666 1083 aa25.53■■□□□ 1.68
LYSMD4-208ENST00000493256 hCG_1642624A0A1W2PR95 340 aa25.52■■□□□ 1.68
LYSMD4-208ENST00000493256 LGALS2P05162 132 aa25.52■■□□□ 1.68
LYSMD4-208ENST00000493256 NEDD9Q14511 834 aa25.52■■□□□ 1.68
LYSMD4-208ENST00000493256 TCTN1Q2MV58 587 aa25.52■■□□□ 1.68
LYSMD4-208ENST00000493256 ZNF618Q5T7W0 954 aa25.52■■□□□ 1.68
LYSMD4-208ENST00000493256 PCNX4Q63HM2 1172 aa25.52■■□□□ 1.68
LYSMD4-208ENST00000493256 CNKSR3Q6P9H4 555 aa25.52■■□□□ 1.68
LYSMD4-208ENST00000493256 METTL7BQ6UX53 244 aa25.52■■□□□ 1.68
LYSMD4-208ENST00000493256 CYFIP1Q7L576 1253 aa25.52■■□□□ 1.68
LYSMD4-208ENST00000493256 H3BRB1 525 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms