RNA–Protein interactions for RNA: ENST00000454441.2

LINC01287-203, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 5 BASIC

Gene LINC01287, Length 1,007 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-203ENST00000454441 SMARCA1P28370 1054 aa13.74□□□□□ -0.21
LINC01287-203ENST00000454441 LIFRP42702 1097 aa13.74□□□□□ -0.21
LINC01287-203ENST00000454441 BFSP2Q13515 415 aa13.74□□□□□ -0.21
LINC01287-203ENST00000454441 DEFB128Q7Z7B8 93 aa13.74□□□□□ -0.21
LINC01287-203ENST00000454441 RAB11FIP4Q86YS3 637 aa13.74□□□□□ -0.21
LINC01287-203ENST00000454441 CMTR1Q8N1G2 835 aaKnown RBP13.74□□□□□ -0.21
LINC01287-203ENST00000454441 RETREG2Q8NC44 543 aa13.74□□□□□ -0.21
LINC01287-203ENST00000454441 SMARCC2Q8TAQ2 1214 aa13.74□□□□□ -0.21
LINC01287-203ENST00000454441 KAT2BQ92831 832 aa13.74□□□□□ -0.21
LINC01287-203ENST00000454441 CUL5Q93034 780 aa13.74□□□□□ -0.21
LINC01287-203ENST00000454441 ALG1Q9BT22 464 aa13.74□□□□□ -0.21
LINC01287-203ENST00000454441 ZNF576Q9H609 170 aa13.74□□□□□ -0.21
LINC01287-203ENST00000454441 SLC12A7Q9Y666 1083 aa13.74□□□□□ -0.21
LINC01287-203ENST00000454441 FRMPD4Q14CM0 1322 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 TGFB3P10600 412 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 UBA1P22314 1058 aaKnown RBP13.73□□□□□ -0.21
LINC01287-203ENST00000454441 RFC2P35250 354 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 PSEN2P49810 448 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 GRIN2CQ14957 1233 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 RAB30Q15771 203 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 GNPTABQ3T906 1256 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 CELF3Q5SZQ8 465 aaKnown RBP13.73□□□□□ -0.21
LINC01287-203ENST00000454441 MYSM1Q5VVJ2 828 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 GDF6Q6KF10 455 aaPredicted RBP13.73□□□□□ -0.21
LINC01287-203ENST00000454441 SESTD1Q86VW0 696 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 SRBD1Q8N5C6 995 aaKnown RBP13.73□□□□□ -0.21
LINC01287-203ENST00000454441 CCDC155Q8N6L0 562 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 C7orf31Q8N865 590 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 MAFAQ8NHW3 353 aaPredicted RBP13.73□□□□□ -0.21
LINC01287-203ENST00000454441 GPKOWQ92917 476 aaPredicted RBP eCLIP13.73□□□□□ -0.21
LINC01287-203ENST00000454441 SPATA33Q96N06 139 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 MLXIPQ9HAP2 919 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 HDAC6Q9UBN7 1215 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 GTF2IRD1Q9UHL9 959 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 MSRAQ9UJ68 235 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 SLC4A7Q9Y6M7 1214 aa13.73□□□□□ -0.21
LINC01287-203ENST00000454441 CDC45O75419 566 aa13.72□□□□□ -0.21
LINC01287-203ENST00000454441 STAM2O75886 525 aa13.72□□□□□ -0.21
LINC01287-203ENST00000454441 F2P00734 622 aa13.72□□□□□ -0.21
LINC01287-203ENST00000454441 IQCF3P0C7M6 154 aa13.72□□□□□ -0.21
LINC01287-203ENST00000454441 ACTN1P12814 892 aa13.72□□□□□ -0.21
LINC01287-203ENST00000454441 SP2Q02086 613 aa13.72□□□□□ -0.21
LINC01287-203ENST00000454441 MFSD10Q14728 455 aa13.72□□□□□ -0.21
LINC01287-203ENST00000454441 KIAA0753Q2KHM9 967 aa13.72□□□□□ -0.21
LINC01287-203ENST00000454441 HSDL1Q3SXM5 330 aa13.72□□□□□ -0.21
LINC01287-203ENST00000454441 USP17L6PQ6QN14 398 aa13.72□□□□□ -0.21
LINC01287-203ENST00000454441 SYNE3Q6ZMZ3 975 aa13.72□□□□□ -0.21
LINC01287-203ENST00000454441 MICU3Q86XE3 530 aa13.72□□□□□ -0.21
LINC01287-203ENST00000454441 CAGE1Q8TC20 777 aa13.72□□□□□ -0.21
LINC01287-203ENST00000454441 VWCEQ96DN2 955 aa13.72□□□□□ -0.21
LINC01287-203ENST00000454441 NEK1Q96PY6 1258 aa13.72□□□□□ -0.21
LINC01287-203ENST00000454441 KAT6AQ92794 2004 aa13.71□□□□□ -0.21
LINC01287-203ENST00000454441 PTPRSQ13332 1948 aa13.71□□□□□ -0.21
LINC01287-203ENST00000454441 PIK3CDO00329 1044 aa13.71□□□□□ -0.21
LINC01287-203ENST00000454441 DLL1O00548 723 aa13.71□□□□□ -0.21
LINC01287-203ENST00000454441 PPFIA4O75335 1185 aa13.71□□□□□ -0.21
LINC01287-203ENST00000454441 HOXD8P13378 290 aaPredicted RBP13.71□□□□□ -0.21
LINC01287-203ENST00000454441 MRPS9P82933 396 aaKnown RBP13.71□□□□□ -0.21
LINC01287-203ENST00000454441 SGMS1Q86VZ5 419 aa13.71□□□□□ -0.21
LINC01287-203ENST00000454441 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.71□□□□□ -0.21
LINC01287-203ENST00000454441 CCDC82Q8N4S0 544 aa13.71□□□□□ -0.21
LINC01287-203ENST00000454441 FANCBQ8NB91 859 aa13.71□□□□□ -0.21
LINC01287-203ENST00000454441 AFAP1L1Q8TED9 768 aa13.71□□□□□ -0.21
LINC01287-203ENST00000454441 CTAGE1Q96RT6 745 aa13.71□□□□□ -0.21
LINC01287-203ENST00000454441 FTOQ9C0B1 505 aaKnown RBP eCLIP13.71□□□□□ -0.21
LINC01287-203ENST00000454441 NKX2-4Q9H2Z4 354 aa13.71□□□□□ -0.21
LINC01287-203ENST00000454441 RTEL1Q9NZ71 1219 aa13.71□□□□□ -0.21
LINC01287-203ENST00000454441 hCG_1642624A0A1W2PR95 340 aa13.7□□□□□ -0.22
LINC01287-203ENST00000454441 HAS3O00219 553 aa13.7□□□□□ -0.22
LINC01287-203ENST00000454441 NOP56O00567 594 aaKnown RBP13.7□□□□□ -0.22
LINC01287-203ENST00000454441 MEIS2O14770 477 aa13.7□□□□□ -0.22
LINC01287-203ENST00000454441 FIBPO43427 364 aa13.7□□□□□ -0.22
LINC01287-203ENST00000454441 ATP2A2P16615 1042 aaKnown RBP13.7□□□□□ -0.22
LINC01287-203ENST00000454441 RABGGTBP53611 331 aa13.7□□□□□ -0.22
LINC01287-203ENST00000454441 PCNX4Q63HM2 1172 aa13.7□□□□□ -0.22
LINC01287-203ENST00000454441 TMTC3Q6ZXV5 915 aa13.7□□□□□ -0.22
LINC01287-203ENST00000454441 DHX38Q92620 1227 aaKnown RBP13.7□□□□□ -0.22
LINC01287-203ENST00000454441 CCDC136Q96JN2 1154 aa13.7□□□□□ -0.22
LINC01287-203ENST00000454441 TCEANC2Q96MN5 208 aa13.7□□□□□ -0.22
LINC01287-203ENST00000454441 INPP4AQ96PE3 977 aaPredicted RBP13.7□□□□□ -0.22
LINC01287-203ENST00000454441 GAS2L1Q99501 681 aaPredicted RBP13.7□□□□□ -0.22
LINC01287-203ENST00000454441 SLC28A3Q9HAS3 691 aa13.7□□□□□ -0.22
LINC01287-203ENST00000454441 A0A0C4DFX4 3053 aa13.69□□□□□ -0.22
LINC01287-203ENST00000454441 PRUNE2Q8WUY3 3088 aa13.69□□□□□ -0.22
LINC01287-203ENST00000454441 SELPP16109 830 aa13.69□□□□□ -0.22
LINC01287-203ENST00000454441 ICAM3P32942 547 aa13.69□□□□□ -0.22
LINC01287-203ENST00000454441 SEMA3FQ13275 785 aa13.69□□□□□ -0.22
LINC01287-203ENST00000454441 NEDD9Q14511 834 aa13.69□□□□□ -0.22
LINC01287-203ENST00000454441 KRT32Q14532 448 aa13.69□□□□□ -0.22
LINC01287-203ENST00000454441 APOA5Q6Q788 366 aa13.69□□□□□ -0.22
LINC01287-203ENST00000454441 METTL7BQ6UX53 244 aa13.69□□□□□ -0.22
LINC01287-203ENST00000454441 LRRC8DQ7L1W4 858 aa13.69□□□□□ -0.22
LINC01287-203ENST00000454441 DHX32Q7L7V1 743 aaKnown RBP13.69□□□□□ -0.22
LINC01287-203ENST00000454441 C16orf70Q9BSU1 422 aa13.69□□□□□ -0.22
LINC01287-203ENST00000454441 PSTPIP2Q9H939 334 aa13.69□□□□□ -0.22
LINC01287-203ENST00000454441 RBM28Q9NW13 759 aaKnown RBP13.69□□□□□ -0.22
LINC01287-203ENST00000454441 YBX2Q9Y2T7 364 aaKnown RBP13.69□□□□□ -0.22
LINC01287-203ENST00000454441 SPATA31C2B4DYI2 1134 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 LGALS2P05162 132 aa13.68□□□□□ -0.22
LINC01287-203ENST00000454441 CKBP12277 381 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms