RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 BFSP2Q13515 415 aa19.42■□□□□ 0.7
COL16A1-204ENST00000440437 HSDL1Q3SXM5 330 aa19.42■□□□□ 0.7
COL16A1-204ENST00000440437 NFXL1Q6ZNB6 911 aa19.42■□□□□ 0.7
COL16A1-204ENST00000440437 CAGE1Q8TC20 777 aa19.42■□□□□ 0.7
COL16A1-204ENST00000440437 DHX38Q92620 1227 aaKnown RBP19.42■□□□□ 0.7
COL16A1-204ENST00000440437 INPP4AQ96PE3 977 aaPredicted RBP19.42■□□□□ 0.7
COL16A1-204ENST00000440437 LZTS2Q9BRK4 669 aa19.42■□□□□ 0.7
COL16A1-204ENST00000440437 NOD1Q9Y239 953 aa19.42■□□□□ 0.7
COL16A1-204ENST00000440437 YBX2Q9Y2T7 364 aaKnown RBP19.42■□□□□ 0.7
COL16A1-204ENST00000440437 SLC4A7Q9Y6M7 1214 aa19.42■□□□□ 0.7
COL16A1-204ENST00000440437 MEIS2O14770 477 aa19.41■□□□□ 0.7
COL16A1-204ENST00000440437 CALM1P0DP23 149 aa19.41■□□□□ 0.7
COL16A1-204ENST00000440437 CALM2P0DP24 149 aa19.41■□□□□ 0.7
COL16A1-204ENST00000440437 CALM3P0DP25 149 aa19.41■□□□□ 0.7
COL16A1-204ENST00000440437 GNAQP50148 359 aa19.41■□□□□ 0.7
COL16A1-204ENST00000440437 MFSD10Q14728 455 aa19.41■□□□□ 0.7
COL16A1-204ENST00000440437 SGMS1Q86VZ5 419 aa19.41■□□□□ 0.7
COL16A1-204ENST00000440437 RETREG2Q8NC44 543 aa19.41■□□□□ 0.7
COL16A1-204ENST00000440437 SPATA33Q96N06 139 aa19.41■□□□□ 0.7
COL16A1-204ENST00000440437 LRRC2Q9BYS8 371 aa19.41■□□□□ 0.7
COL16A1-204ENST00000440437 NKX2-4Q9H2Z4 354 aa19.41■□□□□ 0.7
COL16A1-204ENST00000440437 HDAC6Q9UBN7 1215 aa19.41■□□□□ 0.7
COL16A1-204ENST00000440437 SEC63Q9UGP8 760 aaKnown RBP19.41■□□□□ 0.7
COL16A1-204ENST00000440437 MSRAQ9UJ68 235 aa19.41■□□□□ 0.7
COL16A1-204ENST00000440437 CHD7Q9P2D1 2997 aa19.41■□□□□ 0.7
COL16A1-204ENST00000440437 ZBBXA8MT70 800 aa19.4■□□□□ 0.7
COL16A1-204ENST00000440437 PIK3CDO00329 1044 aa19.4■□□□□ 0.7
COL16A1-204ENST00000440437 SORBS3O60504 671 aa19.4■□□□□ 0.7
COL16A1-204ENST00000440437 PPFIA4O75335 1185 aa19.4■□□□□ 0.7
COL16A1-204ENST00000440437 STAM2O75886 525 aa19.4■□□□□ 0.7
COL16A1-204ENST00000440437 ICAM3P32942 547 aa19.4■□□□□ 0.7
COL16A1-204ENST00000440437 SEMA3FQ13275 785 aa19.4■□□□□ 0.7
COL16A1-204ENST00000440437 KIAA0753Q2KHM9 967 aa19.4■□□□□ 0.7
COL16A1-204ENST00000440437 USP17L6PQ6QN14 398 aa19.4■□□□□ 0.7
COL16A1-204ENST00000440437 CMTR1Q8N1G2 835 aaKnown RBP19.4■□□□□ 0.7
COL16A1-204ENST00000440437 CCDC155Q8N6L0 562 aa19.4■□□□□ 0.7
COL16A1-204ENST00000440437 AFAP1L1Q8TED9 768 aa19.4■□□□□ 0.7
COL16A1-204ENST00000440437 ALG1Q9BT22 464 aa19.4■□□□□ 0.7
COL16A1-204ENST00000440437 MYO9BQ13459 2157 aa19.39■□□□□ 0.69
COL16A1-204ENST00000440437 RABGGTBP53611 331 aa19.39■□□□□ 0.69
COL16A1-204ENST00000440437 GPNMBQ14956 572 aa19.39■□□□□ 0.69
COL16A1-204ENST00000440437 TMTC3Q6ZXV5 915 aa19.39■□□□□ 0.69
COL16A1-204ENST00000440437 RAB11FIP4Q86YS3 637 aa19.39■□□□□ 0.69
COL16A1-204ENST00000440437 C7orf31Q8N865 590 aa19.39■□□□□ 0.69
COL16A1-204ENST00000440437 C16orf70Q9BSU1 422 aa19.39■□□□□ 0.69
COL16A1-204ENST00000440437 BCAS3Q9H6U6 928 aa19.39■□□□□ 0.69
COL16A1-204ENST00000440437 SLC12A7Q9Y666 1083 aa19.39■□□□□ 0.69
COL16A1-204ENST00000440437 ACTN1P12814 892 aa19.38■□□□□ 0.69
COL16A1-204ENST00000440437 ATP2A2P16615 1042 aaKnown RBP19.38■□□□□ 0.69
COL16A1-204ENST00000440437 GNPTABQ3T906 1256 aa19.38■□□□□ 0.69
COL16A1-204ENST00000440437 RNF20Q5VTR2 975 aa19.38■□□□□ 0.69
COL16A1-204ENST00000440437 PCNX4Q63HM2 1172 aa19.38■□□□□ 0.69
COL16A1-204ENST00000440437 SMARCC2Q8TAQ2 1214 aa19.38■□□□□ 0.69
COL16A1-204ENST00000440437 CUL5Q93034 780 aa19.38■□□□□ 0.69
COL16A1-204ENST00000440437 PRDM12Q9H4Q4 367 aa19.38■□□□□ 0.69
COL16A1-204ENST00000440437 MLXIPQ9HAP2 919 aa19.38■□□□□ 0.69
COL16A1-204ENST00000440437 PCDHA11Q9Y5I1 949 aa19.38■□□□□ 0.69
COL16A1-204ENST00000440437 SPATA31C2B4DYI2 1134 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 FIBPO43427 364 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 CDC45O75419 566 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 CKBP12277 381 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 SELPP16109 830 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 EXOSC10Q01780 885 aaKnown RBP19.37■□□□□ 0.69
COL16A1-204ENST00000440437 PTK7Q13308 1070 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 HIC1Q14526 733 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 TRIM71Q2Q1W2 868 aaKnown RBP19.37■□□□□ 0.69
COL16A1-204ENST00000440437 TSGA10IPQ3SY00 556 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 APOA5Q6Q788 366 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 LRRC8DQ7L1W4 858 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 MICU3Q86XE3 530 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 FANCBQ8NB91 859 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 WNT8BQ93098 351 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 NEK1Q96PY6 1258 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 SLC9A7Q96T83 725 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 GAS2L1Q99501 681 aaPredicted RBP19.37■□□□□ 0.69
COL16A1-204ENST00000440437 SLC28A3Q9HAS3 691 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 RTEL1Q9NZ71 1219 aa19.37■□□□□ 0.69
COL16A1-204ENST00000440437 CNTNAP5Q8WYK1 1306 aa19.36■□□□□ 0.69
COL16A1-204ENST00000440437 MYOGP15173 224 aa19.36■□□□□ 0.69
COL16A1-204ENST00000440437 HOXC8P31273 242 aa19.36■□□□□ 0.69
COL16A1-204ENST00000440437 ZNF200P98182 395 aaPredicted RBP19.36■□□□□ 0.69
COL16A1-204ENST00000440437 NEDD9Q14511 834 aa19.36■□□□□ 0.69
COL16A1-204ENST00000440437 ADCK5Q3MIX3 580 aa19.36■□□□□ 0.69
COL16A1-204ENST00000440437 XRRA1Q6P2D8 792 aa19.36■□□□□ 0.69
COL16A1-204ENST00000440437 TRAF7Q6Q0C0 670 aa19.36■□□□□ 0.69
COL16A1-204ENST00000440437 METTL7BQ6UX53 244 aa19.36■□□□□ 0.69
COL16A1-204ENST00000440437 RASEFQ8IZ41 740 aa19.36■□□□□ 0.69
COL16A1-204ENST00000440437 USP38Q8NB14 1042 aa19.36■□□□□ 0.69
COL16A1-204ENST00000440437 FTOQ9C0B1 505 aaKnown RBP eCLIP19.36■□□□□ 0.69
COL16A1-204ENST00000440437 MICAL3Q7RTP6 2002 aa19.35■□□□□ 0.69
COL16A1-204ENST00000440437 hCG_1642624A0A1W2PR95 340 aa19.35■□□□□ 0.69
COL16A1-204ENST00000440437 BAIAP3O94812 1187 aa19.35■□□□□ 0.69
COL16A1-204ENST00000440437 PARNO95453 639 aaKnown RBP19.35■□□□□ 0.69
COL16A1-204ENST00000440437 CXCL10P02778 98 aa19.35■□□□□ 0.69
COL16A1-204ENST00000440437 LGALS2P05162 132 aa19.35■□□□□ 0.69
COL16A1-204ENST00000440437 ADGRE1Q14246 886 aa19.35■□□□□ 0.69
COL16A1-204ENST00000440437 PPP2R2DQ66LE6 453 aa19.35■□□□□ 0.69
COL16A1-204ENST00000440437 CCDC82Q8N4S0 544 aa19.35■□□□□ 0.69
COL16A1-204ENST00000440437 PHOSPHO2Q8TCD6 241 aa19.35■□□□□ 0.69
COL16A1-204ENST00000440437 COL4A4P53420 1690 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms