RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 RFC2P35250 354 aa31.45■■■□□ 2.63
LMO1-202ENST00000428101 PSEN2P49810 448 aa31.45■■■□□ 2.63
LMO1-202ENST00000428101 BFSP2Q13515 415 aa31.45■■■□□ 2.63
LMO1-202ENST00000428101 CMTR1Q8N1G2 835 aaKnown RBP31.45■■■□□ 2.63
LMO1-202ENST00000428101 SPATA33Q96N06 139 aa31.45■■■□□ 2.63
LMO1-202ENST00000428101 HDAC6Q9UBN7 1215 aa31.45■■■□□ 2.63
LMO1-202ENST00000428101 GTF2IRD1Q9UHL9 959 aa31.45■■■□□ 2.63
LMO1-202ENST00000428101 MSRAQ9UJ68 235 aa31.45■■■□□ 2.63
LMO1-202ENST00000428101 SLC4A7Q9Y6M7 1214 aa31.45■■■□□ 2.63
LMO1-202ENST00000428101 PPFIA4O75335 1185 aa31.44■■■□□ 2.62
LMO1-202ENST00000428101 MFSD10Q14728 455 aa31.44■■■□□ 2.62
LMO1-202ENST00000428101 RAB30Q15771 203 aa31.44■■■□□ 2.62
LMO1-202ENST00000428101 USP17L6PQ6QN14 398 aa31.44■■■□□ 2.62
LMO1-202ENST00000428101 RAB11FIP4Q86YS3 637 aa31.44■■■□□ 2.62
LMO1-202ENST00000428101 PHF6Q8IWS0 365 aaKnown RBP eCLIP31.44■■■□□ 2.62
LMO1-202ENST00000428101 ALG1Q9BT22 464 aa31.44■■■□□ 2.62
LMO1-202ENST00000428101 KATNAL1Q9BW62 490 aa31.44■■■□□ 2.62
LMO1-202ENST00000428101 YBX2Q9Y2T7 364 aaKnown RBP31.44■■■□□ 2.62
LMO1-202ENST00000428101 MEIS2O14770 477 aa31.43■■■□□ 2.62
LMO1-202ENST00000428101 CALM1P0DP23 149 aa31.43■■■□□ 2.62
LMO1-202ENST00000428101 CALM2P0DP24 149 aa31.43■■■□□ 2.62
LMO1-202ENST00000428101 CALM3P0DP25 149 aa31.43■■■□□ 2.62
LMO1-202ENST00000428101 KIAA0753Q2KHM9 967 aa31.43■■■□□ 2.62
LMO1-202ENST00000428101 DHX38Q92620 1227 aaKnown RBP31.43■■■□□ 2.62
LMO1-202ENST00000428101 BCAS3Q9H6U6 928 aa31.43■■■□□ 2.62
LMO1-202ENST00000428101 SEC63Q9UGP8 760 aaKnown RBP31.43■■■□□ 2.62
LMO1-202ENST00000428101 SLC12A7Q9Y666 1083 aa31.43■■■□□ 2.62
LMO1-202ENST00000428101 ZBBXA8MT70 800 aa31.42■■■□□ 2.62
LMO1-202ENST00000428101 PIK3CDO00329 1044 aa31.42■■■□□ 2.62
LMO1-202ENST00000428101 RABGGTBP53611 331 aa31.42■■■□□ 2.62
LMO1-202ENST00000428101 SGMS1Q86VZ5 419 aa31.42■■■□□ 2.62
LMO1-202ENST00000428101 C7orf31Q8N865 590 aa31.42■■■□□ 2.62
LMO1-202ENST00000428101 CAGE1Q8TC20 777 aa31.42■■■□□ 2.62
LMO1-202ENST00000428101 INPP4AQ96PE3 977 aaPredicted RBP31.42■■■□□ 2.62
LMO1-202ENST00000428101 NKX2-4Q9H2Z4 354 aa31.42■■■□□ 2.62
LMO1-202ENST00000428101 CHD7Q9P2D1 2997 aa31.42■■■□□ 2.62
LMO1-202ENST00000428101 STAM2O75886 525 aa31.41■■■□□ 2.62
LMO1-202ENST00000428101 ICAM3P32942 547 aa31.41■■■□□ 2.62
LMO1-202ENST00000428101 SEMA3FQ13275 785 aa31.41■■■□□ 2.62
LMO1-202ENST00000428101 RNF20Q5VTR2 975 aa31.41■■■□□ 2.62
LMO1-202ENST00000428101 FANCBQ8NB91 859 aa31.41■■■□□ 2.62
LMO1-202ENST00000428101 DOCK5Q9H7D0 1870 aa31.41■■■□□ 2.62
LMO1-202ENST00000428101 GPNMBQ14956 572 aa31.4■■■□□ 2.62
LMO1-202ENST00000428101 SMARCC2Q8TAQ2 1214 aa31.4■■■□□ 2.62
LMO1-202ENST00000428101 AFAP1L1Q8TED9 768 aa31.4■■■□□ 2.62
LMO1-202ENST00000428101 CUL5Q93034 780 aa31.4■■■□□ 2.62
LMO1-202ENST00000428101 C16orf70Q9BSU1 422 aa31.4■■■□□ 2.62
LMO1-202ENST00000428101 MLXIPQ9HAP2 919 aa31.4■■■□□ 2.62
LMO1-202ENST00000428101 RTEL1Q9NZ71 1219 aa31.4■■■□□ 2.62
LMO1-202ENST00000428101 SPATA31C2B4DYI2 1134 aa31.39■■■□□ 2.62
LMO1-202ENST00000428101 ATP2A2P16615 1042 aaKnown RBP31.39■■■□□ 2.62
LMO1-202ENST00000428101 RBL2Q08999 1139 aa31.39■■■□□ 2.62
LMO1-202ENST00000428101 GNPTABQ3T906 1256 aa31.39■■■□□ 2.62
LMO1-202ENST00000428101 TMTC3Q6ZXV5 915 aa31.39■■■□□ 2.62
LMO1-202ENST00000428101 RASEFQ8IZ41 740 aa31.39■■■□□ 2.62
LMO1-202ENST00000428101 CCDC155Q8N6L0 562 aa31.39■■■□□ 2.62
LMO1-202ENST00000428101 NEK1Q96PY6 1258 aa31.39■■■□□ 2.62
LMO1-202ENST00000428101 hCG_1642624A0A1W2PR95 340 aa31.38■■■□□ 2.61
LMO1-202ENST00000428101 ACTN1P12814 892 aa31.38■■■□□ 2.61
LMO1-202ENST00000428101 MYOGP15173 224 aa31.38■■■□□ 2.61
LMO1-202ENST00000428101 EXOSC10Q01780 885 aaKnown RBP31.38■■■□□ 2.61
LMO1-202ENST00000428101 HIC1Q14526 733 aa31.38■■■□□ 2.61
LMO1-202ENST00000428101 TSGA10IPQ3SY00 556 aa31.38■■■□□ 2.61
LMO1-202ENST00000428101 CCDC82Q8N4S0 544 aa31.38■■■□□ 2.61
LMO1-202ENST00000428101 FTOQ9C0B1 505 aaKnown RBP eCLIP31.38■■■□□ 2.61
LMO1-202ENST00000428101 PRDM12Q9H4Q4 367 aa31.38■■■□□ 2.61
LMO1-202ENST00000428101 CDC45O75419 566 aa31.37■■■□□ 2.61
LMO1-202ENST00000428101 ZNF200P98182 395 aaPredicted RBP31.37■■■□□ 2.61
LMO1-202ENST00000428101 PCNX4Q63HM2 1172 aa31.37■■■□□ 2.61
LMO1-202ENST00000428101 MICU3Q86XE3 530 aa31.37■■■□□ 2.61
LMO1-202ENST00000428101 PSTPIP2Q9H939 334 aa31.37■■■□□ 2.61
LMO1-202ENST00000428101 PCDHA11Q9Y5I1 949 aa31.37■■■□□ 2.61
LMO1-202ENST00000428101 VCANP13611 3396 aa31.37■■■□□ 2.61
LMO1-202ENST00000428101 CKBP12277 381 aa31.36■■■□□ 2.61
LMO1-202ENST00000428101 SELPP16109 830 aa31.36■■■□□ 2.61
LMO1-202ENST00000428101 ADCK5Q3MIX3 580 aa31.36■■■□□ 2.61
LMO1-202ENST00000428101 LRRC8DQ7L1W4 858 aa31.36■■■□□ 2.61
LMO1-202ENST00000428101 WNT8BQ93098 351 aa31.36■■■□□ 2.61
LMO1-202ENST00000428101 TCEANC2Q96MN5 208 aa31.36■■■□□ 2.61
LMO1-202ENST00000428101 SLC28A3Q9HAS3 691 aa31.36■■■□□ 2.61
LMO1-202ENST00000428101 FIBPO43427 364 aa31.35■■■□□ 2.61
LMO1-202ENST00000428101 PTK7Q13308 1070 aa31.35■■■□□ 2.61
LMO1-202ENST00000428101 NEDD9Q14511 834 aa31.35■■■□□ 2.61
LMO1-202ENST00000428101 TRIM71Q2Q1W2 868 aaKnown RBP31.35■■■□□ 2.61
LMO1-202ENST00000428101 XRRA1Q6P2D8 792 aa31.35■■■□□ 2.61
LMO1-202ENST00000428101 APOA5Q6Q788 366 aa31.35■■■□□ 2.61
LMO1-202ENST00000428101 METTL7BQ6UX53 244 aa31.35■■■□□ 2.61
LMO1-202ENST00000428101 CYFIP1Q7L576 1253 aa31.35■■■□□ 2.61
LMO1-202ENST00000428101 DHX32Q7L7V1 743 aaKnown RBP31.35■■■□□ 2.61
LMO1-202ENST00000428101 CUL9Q8IWT3 2517 aa31.34■■■□□ 2.61
LMO1-202ENST00000428101 BRPF3Q9ULD4 1205 aa31.34■■■□□ 2.61
LMO1-202ENST00000428101 LGALS2P05162 132 aa31.33■■■□□ 2.61
LMO1-202ENST00000428101 ADGRE1Q14246 886 aa31.33■■■□□ 2.61
LMO1-202ENST00000428101 TRAF7Q6Q0C0 670 aa31.33■■■□□ 2.61
LMO1-202ENST00000428101 USP38Q8NB14 1042 aa31.33■■■□□ 2.61
LMO1-202ENST00000428101 SLC9A7Q96T83 725 aa31.33■■■□□ 2.61
LMO1-202ENST00000428101 GAS2L1Q99501 681 aaPredicted RBP31.33■■■□□ 2.61
LMO1-202ENST00000428101 GPR20Q99678 358 aa31.33■■■□□ 2.61
LMO1-202ENST00000428101 TELO2Q9Y4R8 837 aa31.33■■■□□ 2.61
LMO1-202ENST00000428101 PTPRSQ13332 1948 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms