RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 R3HDMLQ9H3Y0 253 aa16.11■□□□□ 0.17
SHMT1P1-201ENST00000419974 PCDHA12Q9UN75 941 aa16.11■□□□□ 0.17
SHMT1P1-201ENST00000419974 DIS3Q9Y2L1 958 aaKnown RBP16.11■□□□□ 0.17
SHMT1P1-201ENST00000419974 MYH7BA7E2Y1 1941 aa16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 A0A1B0GVL5 298 aa16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 ZNF202O95125 648 aa16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 NR3C2P08235 984 aa16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 FCER1AP12319 257 aa16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 ITGB5P18084 799 aa16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 CCND2P30279 289 aa16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 ZNF76P36508 570 aa16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 SYKP43405 635 aa16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 SPIRE1Q08AE8 756 aa16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 PRR16Q569H4 304 aa16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 HYIQ5T013 277 aa16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 B3GNT9Q6UX72 402 aa16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 ZNF467Q7Z7K2 595 aaPredicted RBP16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 GPRASP2Q96D09 838 aa16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 CDHR1Q96JP9 859 aa16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 CLSTN2Q9H4D0 955 aa16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 TTC12Q9H892 705 aaPredicted RBP16.1■□□□□ 0.17
SHMT1P1-201ENST00000419974 MSH4O15457 936 aa16.09■□□□□ 0.17
SHMT1P1-201ENST00000419974 EIF3JO75822 258 aaKnown RBP16.09■□□□□ 0.17
SHMT1P1-201ENST00000419974 PSMD10O75832 226 aa16.09■□□□□ 0.17
SHMT1P1-201ENST00000419974 MUTP22033 750 aa16.09■□□□□ 0.17
SHMT1P1-201ENST00000419974 ICAM3P32942 547 aa16.09■□□□□ 0.17
SHMT1P1-201ENST00000419974 TXLNAP40222 546 aa16.09■□□□□ 0.17
SHMT1P1-201ENST00000419974 ZNF445P59923 1031 aa16.09■□□□□ 0.17
SHMT1P1-201ENST00000419974 IRF5Q13568 498 aa16.09■□□□□ 0.17
SHMT1P1-201ENST00000419974 KCTD2Q14681 263 aa16.09■□□□□ 0.17
SHMT1P1-201ENST00000419974 KANK3Q6NY19 840 aa16.09■□□□□ 0.17
SHMT1P1-201ENST00000419974 CAVIN1Q6NZI2 390 aaKnown RBP16.09■□□□□ 0.17
SHMT1P1-201ENST00000419974 ANKRD13CQ8N6S4 541 aa16.09■□□□□ 0.17
SHMT1P1-201ENST00000419974 SYMPKQ92797 1274 aaKnown RBP16.09■□□□□ 0.17
SHMT1P1-201ENST00000419974 MPHOSPH6Q99547 160 aaKnown RBP16.09■□□□□ 0.17
SHMT1P1-201ENST00000419974 CUEDC2Q9H467 287 aa16.09■□□□□ 0.17
SHMT1P1-201ENST00000419974 ZFYVE28Q9HCC9 887 aa16.09■□□□□ 0.17
SHMT1P1-201ENST00000419974 POTEB2H3BUK9 544 aa16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 KINO60870 393 aaKnown RBP16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 SLFN14P0C7P3 912 aa16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 TXKP42681 527 aa16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 ALDH5A1P51649 535 aaPredicted RBP16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 PPP2R5CQ13362 524 aa16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 GRB14Q14449 540 aa16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 PLA2G4DQ86XP0 818 aa16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 MSL3Q8N5Y2 521 aaKnown RBP16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 IQUBQ8NA54 791 aa16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 CYP2W1Q8TAV3 490 aa16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 CCDC34Q96HJ3 373 aa16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 EPSTI1Q96J88 318 aa16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 MMP19Q99542 508 aa16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 WDR11Q9BZH6 1224 aa16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 PORCNQ9H237 461 aa16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 MAGEF1Q9HAY2 307 aa16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 TBC1D22BQ9NU19 505 aa16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 VAV3Q9UKW4 847 aa16.08■□□□□ 0.16
SHMT1P1-201ENST00000419974 ASTN1O14525 1302 aa16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 EIF2AK2P19525 551 aaKnown RBP16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 UBA7P41226 1012 aa16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 TECP42680 631 aa16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 SEMA3FQ13275 785 aa16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 CRHR2Q13324 411 aa16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 TAF1CQ15572 869 aaPredicted RBP16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 STXBP2Q15833 593 aa16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 E2F4Q16254 413 aa16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 ZSCAN23Q3MJ62 389 aa16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 GNPTABQ3T906 1256 aa16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 OTOP1Q7RTM1 612 aa16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 NLRX1Q86UT6 975 aa16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 IL31RAQ8NI17 732 aa16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 SENP7Q9BQF6 1050 aa16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 NUP62CLQ9H1M0 184 aa16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 KCNH7Q9NS40 1196 aa16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 LRWD1Q9UFC0 647 aa16.07■□□□□ 0.16
SHMT1P1-201ENST00000419974 ZNF236Q9UL36 1845 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 SOWAHBA6NEL2 793 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 SLC15A5A6NIM6 579 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 IPO5O00410 1097 aaKnown RBP16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 PEX10O60683 326 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 MYL1P05976 194 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 TGFB3P10600 412 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 MTMR1Q13613 665 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 ZNF792Q3KQV3 632 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 KCNV1Q6PIU1 500 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 FBXO46Q6PJ61 603 aaPredicted RBP16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 MAMDC4Q6UXC1 1216 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 KRBA2Q6ZNG9 492 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 USP49Q70CQ1 688 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 SH3RF1Q7Z6J0 888 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 ERO1AQ96HE7 468 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 FGD4Q96M96 766 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 MMTAG2Q9BU76 263 aaKnown RBP16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 EFCC1Q9HA90 598 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 AGO4Q9HCK5 861 aaKnown RBP16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 DISC1Q9NRI5 854 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 CCDC39Q9UFE4 941 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 HOOK1Q9UJC3 728 aaKnown RBP16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 NFASCO94856 1347 aa16.06■□□□□ 0.16
SHMT1P1-201ENST00000419974 ASB14A6NK59 587 aa16.05■□□□□ 0.16
SHMT1P1-201ENST00000419974 SPATA31C2B4DYI2 1134 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms