RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 CELF3Q5SZQ8 465 aaKnown RBP14.43□□□□□ -0.1
NCKIPSD-203ENST00000415281 HOMER1Q86YM7 354 aa14.43□□□□□ -0.1
NCKIPSD-203ENST00000415281 PPTC7Q8NI37 304 aa14.43□□□□□ -0.1
NCKIPSD-203ENST00000415281 LSG1Q9H089 658 aaKnown RBP14.43□□□□□ -0.1
NCKIPSD-203ENST00000415281 LY9Q9HBG7 655 aa14.43□□□□□ -0.1
NCKIPSD-203ENST00000415281 PNMA6FA0A0J9YX94 578 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 LCHNA4D1U4 455 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 UBA1P22314 1058 aaKnown RBP14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 HOXC8P31273 242 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 TAP1Q03518 808 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 MFSD10Q14728 455 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 WTAPQ15007 396 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 DGKDQ16760 1214 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 KIAA0753Q2KHM9 967 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 KRT40Q6A162 431 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 HERC6Q8IVU3 1022 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 DHX37Q8IY37 1157 aaKnown RBP14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 SAMD3Q8N6K7 520 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 NCOA7Q8NI08 942 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 PHOSPHO2Q8TCD6 241 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 AFAP1L1Q8TED9 768 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 GAS2L1Q99501 681 aaPredicted RBP14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 ALG1Q9BT22 464 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 MYL10Q9BUA6 226 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 MTIF3Q9H2K0 278 aaKnown RBP14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 CERS4Q9HA82 394 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 PPP4R2Q9NY27 417 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 RBM8AQ9Y5S9 174 aaKnown RBP14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 MRVI1Q9Y6F6 885 aa14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 PRRC2BQ5JSZ5 2229 aaKnown RBP14.42□□□□□ -0.1
NCKIPSD-203ENST00000415281 MEIS2O14770 477 aa14.41□□□□□ -0.1
NCKIPSD-203ENST00000415281 LPXNO60711 386 aa14.41□□□□□ -0.1
NCKIPSD-203ENST00000415281 PPFIA4O75335 1185 aa14.41□□□□□ -0.1
NCKIPSD-203ENST00000415281 GGPS1O95749 300 aa14.41□□□□□ -0.1
NCKIPSD-203ENST00000415281 SELPP16109 830 aa14.41□□□□□ -0.1
NCKIPSD-203ENST00000415281 WDR5P61964 334 aaKnown RBP14.41□□□□□ -0.1
NCKIPSD-203ENST00000415281 DEFB103AP81534 67 aa14.41□□□□□ -0.1
NCKIPSD-203ENST00000415281 BFSP2Q13515 415 aa14.41□□□□□ -0.1
NCKIPSD-203ENST00000415281 ZNF618Q5T7W0 954 aa14.41□□□□□ -0.1
NCKIPSD-203ENST00000415281 LRRC8DQ7L1W4 858 aa14.41□□□□□ -0.1
NCKIPSD-203ENST00000415281 FCHSD1Q86WN1 690 aa14.41□□□□□ -0.1
NCKIPSD-203ENST00000415281 RETREG2Q8NC44 543 aa14.41□□□□□ -0.1
NCKIPSD-203ENST00000415281 MTCH2Q9Y6C9 303 aa14.41□□□□□ -0.1
NCKIPSD-203ENST00000415281 BDP1A6H8Y1 2624 aa14.41□□□□□ -0.1
NCKIPSD-203ENST00000415281 TCF20Q9UGU0 1960 aaKnown RBP14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 COL4A4P53420 1690 aaPredicted RBP14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 SPATA31C2B4DYI2 1134 aa14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 GCOM1H8Y6P7 765 aaPredicted RBP14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 PLEKHA8P1O95397 391 aa14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 POLR2MP0CAP2 368 aa14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 IGFBP4P22692 258 aa14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 ICAM3P32942 547 aa14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 TRDNQ13061 729 aa14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 NECTIN1Q15223 517 aa14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 TMEM67Q5HYA8 995 aa14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 TJAP1Q5JTD0 557 aa14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 ERICH6BQ5W0A0 696 aa14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 PPP2R2DQ66LE6 453 aa14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 CMTR1Q8N1G2 835 aaKnown RBP14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 SRBD1Q8N5C6 995 aaKnown RBP14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 CAGE1Q8TC20 777 aa14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 RUFY2Q8WXA3 655 aa14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 PIBF1Q8WXW3 757 aa14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 INPP4AQ96PE3 977 aaPredicted RBP14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 SLC9A7Q96T83 725 aa14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 MAP3K14Q99558 947 aa14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 FTOQ9C0B1 505 aaKnown RBP eCLIP14.4□□□□□ -0.1
NCKIPSD-203ENST00000415281 TGFB3P10600 412 aa14.39□□□□□ -0.11
NCKIPSD-203ENST00000415281 PTK7Q13308 1070 aa14.39□□□□□ -0.11
NCKIPSD-203ENST00000415281 USP17L6PQ6QN14 398 aa14.39□□□□□ -0.11
NCKIPSD-203ENST00000415281 SERINC5Q86VE9 423 aa14.39□□□□□ -0.11
NCKIPSD-203ENST00000415281 ZNF654Q8IZM8 581 aa14.39□□□□□ -0.11
NCKIPSD-203ENST00000415281 ATXN2LQ8WWM7 1075 aaKnown RBP14.39□□□□□ -0.11
NCKIPSD-203ENST00000415281 SPATA33Q96N06 139 aa14.39□□□□□ -0.11
NCKIPSD-203ENST00000415281 ASB2Q96Q27 587 aa14.39□□□□□ -0.11
NCKIPSD-203ENST00000415281 SIP14410 1827 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 MICAL3Q7RTP6 2002 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 SH2B2O14492 632 aaPredicted RBP14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 SLC27A2O14975 620 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 ATP9AO75110 1047 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 BAIAP3O94812 1187 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 ACTN1P12814 892 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 BMP1P13497 986 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 SMARCA1P28370 1054 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 CCND2P30279 289 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 ADAM17P78536 824 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 KCNV1Q6PIU1 500 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.38□□□□□ -0.114e-15■■■■■ 38
NCKIPSD-203ENST00000415281 C7orf31Q8N865 590 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 GPR20Q99678 358 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 SPZ1Q9BXG8 430 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 RNPEPQ9H4A4 650 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 RTEL1Q9NZ71 1219 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 NOD1Q9Y239 953 aa14.38□□□□□ -0.11
NCKIPSD-203ENST00000415281 TREHO43280 583 aa14.37□□□□□ -0.11
NCKIPSD-203ENST00000415281 PRC1O43663 620 aa14.37□□□□□ -0.11
NCKIPSD-203ENST00000415281 LGALS2P05162 132 aa14.37□□□□□ -0.11
NCKIPSD-203ENST00000415281 RXRAP19793 462 aa14.37□□□□□ -0.11
NCKIPSD-203ENST00000415281 TFF2Q03403 129 aa14.37□□□□□ -0.11
NCKIPSD-203ENST00000415281 CNKSR3Q6P9H4 555 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms