RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 CCNI2Q6ZMN8 369 aaPredicted RBP12.49□□□□□ -0.41
SMAD9-202ENST00000379826 RDH13Q8NBN7 331 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 JPH2Q9BR39 696 aaPredicted RBP12.49□□□□□ -0.41
SMAD9-202ENST00000379826 TMEM60Q9H2L4 133 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 KANSL2Q9H9L4 492 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 ZNF804BA4D1E1 1349 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 PKN1Q16512 942 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 FAM26FQ5R3K3 315 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 GALNT17Q6IS24 598 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 WDR66Q8TBY9 1149 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 CUEDC2Q9H467 287 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 CNTNAP5Q8WYK1 1306 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 SLC1A4P43007 532 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 APBA1Q02410 837 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 AK8Q96MA6 479 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 NSRP1Q9H0G5 558 aaKnown RBP12.49□□□□□ -0.41
SMAD9-202ENST00000379826 IVNS1ABPQ9Y6Y0 642 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 TOPAZ1Q8N9V7 1692 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 TARSL2A2RTX5 802 aaKnown RBP12.49□□□□□ -0.41
SMAD9-202ENST00000379826 MEIS1O00470 390 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 SOCS7O14512 581 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 MRPL12P52815 198 aaKnown RBP12.49□□□□□ -0.41
SMAD9-202ENST00000379826 RUFY4Q6ZNE9 571 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 SPATA4Q8NEY3 305 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 MAGEF1Q9HAY2 307 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 PCDHA12Q9UN75 941 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 COL4A3BPQ9Y5P4 624 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 CSADQ9Y600 493 aa12.49□□□□□ -0.41
SMAD9-202ENST00000379826 A0A1W2PQC6 194 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 ALS2CLQ60I27 953 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 C2orf69Q8N8R5 385 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 ADAMTS1Q9UHI8 967 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 CACNA1FO60840 1977 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 ANO9A1A5B4 782 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 SRGNP10124 158 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 RCAN1P53805 252 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 PDXDC2PQ6P474 469 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.48□□□□□ -0.41
SMAD9-202ENST00000379826 A6NNZ2 444 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 FLOT1O75955 427 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 STK4Q13043 487 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 NAA25Q14CX7 972 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 TUBB8Q3ZCM7 444 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 NUCKS1Q9H1E3 243 aaKnown RBP12.48□□□□□ -0.41
SMAD9-202ENST00000379826 SNX12Q9UMY4 172 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 NOD1Q9Y239 953 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 PRR16Q569H4 304 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 PNMA8AQ86V59 439 aaPredicted RBP12.48□□□□□ -0.41
SMAD9-202ENST00000379826 KSR1Q8IVT5 923 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 CELF1Q92879 486 aaKnown RBP12.48□□□□□ -0.41
SMAD9-202ENST00000379826 GJA10Q969M2 543 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 ANKRD62A6NC57 917 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 SERPING1P05155 500 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 MYL1P05976 194 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 TRIM28Q13263 835 aaKnown RBP12.48□□□□□ -0.41
SMAD9-202ENST00000379826 TBC1D31Q96DN5 1066 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 SH3GLB2Q9NR46 395 aa12.48□□□□□ -0.41
SMAD9-202ENST00000379826 LRRC37A3O60309 1634 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 CCDC172P0C7W6 258 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 XRCC5P13010 732 aaKnown RBP12.47□□□□□ -0.41
SMAD9-202ENST00000379826 KCTD1Q719H9 257 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 MYCT1Q8N699 235 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 RBM12Q9NTZ6 932 aaKnown RBP12.47□□□□□ -0.41
SMAD9-202ENST00000379826 MINPP1Q9UNW1 487 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 PDS5AQ29RF7 1337 aaKnown RBP12.47□□□□□ -0.41
SMAD9-202ENST00000379826 IQCA1LA6NCM1 817 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 RPL13P26373 211 aaKnown RBP12.47□□□□□ -0.41
SMAD9-202ENST00000379826 CETN1Q12798 172 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 TNIP1Q15025 636 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 CCDC50Q8IVM0 306 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 DDX12PQ92771 950 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 NALCNQ8IZF0 1738 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 A0A1W2PRG0 241 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 USP17L5A8MUK1 530 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 WNT7AO00755 349 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 BUB1BO60566 1050 aaPredicted RBP12.47□□□□□ -0.41
SMAD9-202ENST00000379826 GNA14O95837 355 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 PLCG2P16885 1265 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 SEL1L2Q5TEA6 688 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 LRP10Q7Z4F1 713 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 MRRFQ96E11 262 aaKnown RBP12.47□□□□□ -0.41
SMAD9-202ENST00000379826 TMEM47Q9BQJ4 181 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 PSTPIP2Q9H939 334 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 CTTNBP2NLQ9P2B4 639 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 SWAP70Q9UH65 585 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 CLIC2O15247 247 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 NR2F2P24468 414 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 MTMR3Q13615 1198 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 EMBQ6PCB8 327 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 CACNA2D3Q8IZS8 1091 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 MYCBPQ99417 103 aaPredicted RBP12.47□□□□□ -0.41
SMAD9-202ENST00000379826 BAIAP2L1Q9UHR4 511 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 AMFRQ9UKV5 643 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 NOVA2Q9UNW9 492 aaKnown RBP12.47□□□□□ -0.41
SMAD9-202ENST00000379826 DNM3Q9UQ16 869 aa12.47□□□□□ -0.41
SMAD9-202ENST00000379826 PPM1FP49593 454 aaPredicted RBP12.46□□□□□ -0.41
SMAD9-202ENST00000379826 CYP2J2P51589 502 aa12.46□□□□□ -0.41
SMAD9-202ENST00000379826 SH2D4AQ9H788 454 aa12.46□□□□□ -0.41
SMAD9-202ENST00000379826 VIPAS39Q9H9C1 493 aa12.46□□□□□ -0.41
SMAD9-202ENST00000379826 FRMD4BQ9Y2L6 1034 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms